Gene: COL.COLO4_30028

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_30028
  • Transcript Identifier COL.rna28745
  • Gene Type Coding gene
  • Location AWUE01020575.1 : 7984-11932 : positive

Gene Family Information

  • ID HOM05D004647
  • #Genes/#Species 157/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna28745
  • GenBank OMO67701.1
  • id gene30000
  • gene_name COLO4_30028
  • uniprot A0A1R3HBJ6

Descriptions

  • Description Exosome complex RNA-binding protein 1/RRP40/RRP4
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
GOA Databasecytoplasm
GO:0000178
IEA
GOA Databaseexosome (RNase complex)
GO:0000178
IEA
InterProexosome (RNase complex)

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036612 K Homology domain, type 1 superfamily
IPR026699 Exosome complex RNA-binding protein 1/RRP40/RRP4
IPR037319 Rrp40, S1 domain
IPR012340 Nucleic acid-binding, OB-fold
IPR004088 K Homology domain, type 1
Mapman id Description
16.4.1.1.1 RNA processing.RNA surveillance.exosome complex.EXO9 core complex.component RRP40