Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G14187 Trifolium pratense HOM05D002494 ORTHO05D002673 0.0e+00 1232.2 656 100.0
TPR.G18023 Trifolium pratense HOM05D002494 ORTHO05D002673 5.5e-151 538.9 942 42.5
Psat1g185440 Pisum sativum HOM05D002494 ORTHO05D002673 5.7e-116 422.5 946 34.8
Medtr2g020960 Medicago truncatula HOM05D002494 ORTHO05D002673 7.7e-113 412.1 938 34.5
Glyma.13G211900 Glycine max HOM05D002494 ORTHO05D002673 6.6e-96 355.9 1008 31.0
Glyma.15G100800 Glycine max HOM05D002494 ORTHO05D002673 1.6e-94 351.3 987 30.6
Lj6g0008158 Lotus japonicus HOM05D002494 ORTHO05D002673 1.8e-93 347.8 985 29.9
VMungo0540G1417 Vigna mungo HOM05D002494 ORTHO05D002673 1.1e-90 338.6 978 30.1
Phvul.006G158000 Phaseolus vulgaris HOM05D002494 ORTHO05D002673 1.2e-89 335.1 1003 29.9
Lalb_Chr15g0087191 Lupinus albus HOM05D002494 ORTHO05D002673 2.4e-74 284.3 1019 27.2
arahy.Tifrunner.gnm1.ann1.2UVC2V Arachis hypogaea HOM05D002494 ORTHO05D002673 3.3e-71 273.9 975 27.2
arahy.Tifrunner.gnm1.ann1.I64MY8 Arachis hypogaea HOM05D002494 ORTHO05D002673 1.1e-69 268.9 981 26.8
Ca_00591_v3 Cicer arietinum L. HOM05D002494 ORTHO05D002673 1.2e-68 265.4 513 37.0
CiPaw.02G089600 Carya illinoinensis HOM05D002494 ORTHO05D002673 7.6e-52 209.5 1001 25.3
Ca_00589_v3 Cicer arietinum L. HOM05D002494 ORTHO05D002673 7.9e-49 199.5 138 75.4
Prupe.1G147400 Prunus persica HOM05D002494 ORTHO05D002673 3.9e-48 197.2 1041 24.4
Atru.chr4.2700 Acer truncatum HOM05D002494 ORTHO05D002673 7.4e-47 193.0 138 71.0
Gohir.A09G232000 Gossypium hirsutum HOM05D002494 ORTHO05D002673 7.4e-47 193.0 160 64.4
Gohir.D09G233100 Gossypium hirsutum HOM05D002494 ORTHO05D002673 7.4e-47 193.0 160 64.4
Gorai.006G256000 Gossypium raimondii HOM05D002494 ORTHO05D002673 7.4e-47 193.0 160 64.4
TAR365G0297 Trochodendron aralioides HOM05D002494 ORTHO05D002673 7.4e-47 193.0 138 71.0
Duzib212G0707 Durio zibethinus HOM05D002494 ORTHO05D002673 1.3e-46 192.2 160 63.8
Thecc.04G272000 Theobroma cacao HOM05D002494 ORTHO05D002673 1.3e-46 192.2 160 63.8
Aa31LG5G16810 Aethionema arabicum HOM05D002494 ORTHO05D002673 1.6e-46 191.8 181 60.2
COL.COLO4_13973 Corchorus olitorius HOM05D002494 ORTHO05D002673 1.6e-46 191.8 160 63.8
Nn3g21175 Nelumbo nucifera HOM05D002494 ORTHO05D002673 1.6e-46 191.8 138 71.0
Lj6C665T16 Lonicera japonica HOM05D002494 ORTHO05D002673 2.1e-46 191.4 154 65.6
Manes.03G187900 Manihot esculenta HOM05D002494 ORTHO05D002673 2.1e-46 191.4 138 70.3
PSO170G5860 Papaver somniferum HOM05D002494 ORTHO05D002673 2.1e-46 191.4 138 71.7
Actinidia23456 Actinidia chinensis HOM05D002494 ORTHO05D002673 2.8e-46 191.0 138 70.3
AT3G06290 Arabidopsis thaliana HOM05D002494 ORTHO05D002673 2.8e-46 191.0 138 71.0
ATR0626G271 Amborella trichopoda HOM05D002494 ORTHO05D002673 3.7e-46 190.7 138 71.0
Carub.0003s0571 Capsella rubella HOM05D002494 ORTHO05D002673 3.7e-46 190.7 138 71.7
Dinv44457 Davidia involucrata HOM05D002494 ORTHO05D002673 3.7e-46 190.7 139 68.3
BraA05t22893Z Brassica rapa HOM05D002494 ORTHO05D002673 4.8e-46 190.3 138 71.0
PSO302G0174 Papaver somniferum HOM05D002494 ORTHO05D002673 4.8e-46 190.3 138 71.0
BcaC05g30043 Brassica carinata HOM05D002494 ORTHO05D002673 6.2e-46 189.9 138 71.0
A05p41740 Brassica napus HOM05D002494 ORTHO05D002673 8.2e-46 189.5 138 70.3
CSS0019247 Camellia sinensis var. sinensis HOM05D002494 ORTHO05D002673 8.2e-46 189.5 138 68.8
Dinv38353 Davidia involucrata HOM05D002494 ORTHO05D002673 8.2e-46 189.5 139 68.3
BcaB03g14668 Brassica carinata HOM05D002494 ORTHO05D002673 1.1e-45 189.1 138 69.6
BcaC05g29801 Brassica carinata HOM05D002494 ORTHO05D002673 1.1e-45 189.1 138 71.0
A03p34620 Brassica napus HOM05D002494 ORTHO05D002673 1.1e-45 189.1 138 69.6
C03p42080 Brassica napus HOM05D002494 ORTHO05D002673 1.1e-45 189.1 138 69.6
BolC3t16488H Brassica oleracea HOM05D002494 ORTHO05D002673 1.1e-45 189.1 138 69.6
BraA03t12638Z Brassica rapa HOM05D002494 ORTHO05D002673 1.1e-45 189.1 138 69.6
AL3G17180 Arabidopsis lyrata HOM05D002494 ORTHO05D002673 1.4e-45 188.7 138 70.3
RcHm_v2.0_Chr4g0419781 Rosa chinensis HOM05D002494 ORTHO05D002673 1.4e-45 188.7 160 63.1
TWI09G0743 Tripterygium wilfordii HOM05D002494 ORTHO05D002673 1.4e-45 188.7 138 68.8
Aqoxy2G03189 Aquilegia oxysepala HOM05D002494 ORTHO05D002673 1.8e-45 188.3 138 70.3
Lsat_1_v5_gn_6_69301 Lactuca sativa HOM05D002494 ORTHO05D002673 1.8e-45 188.3 138 68.8
PGR004G0605 Punica granatum HOM05D002494 ORTHO05D002673 1.8e-45 188.3 138 68.1
Sp3g05200 Schrenkiella parvula HOM05D002494 ORTHO05D002673 1.8e-45 188.3 138 70.3
THA.LOC104818830 Tarenaya hassleriana HOM05D002494 ORTHO05D002673 1.8e-45 188.3 190 57.4
GSVIVG01017853001 Vitis vinifera HOM05D002494 ORTHO05D002673 1.8e-45 188.3 138 70.3
Actinidia40212 Actinidia chinensis HOM05D002494 ORTHO05D002673 2.4e-45 188.0 138 69.6
vmacro08242 Vaccinium macrocarpon HOM05D002494 ORTHO05D002673 2.4e-45 188.0 138 68.8
CANSAT78G1223 Cannabis sativa HOM05D002494 ORTHO05D002673 3.1e-45 187.6 138 69.6
Rhsim04G0212900 Rhododendron simsii HOM05D002494 ORTHO05D002673 3.1e-45 187.6 138 68.8
SEGI_28422 Sequoiadendron giganteum HOM05D002494 ORTHO05D002673 3.1e-45 187.6 145 66.2
Sc13g0003790 Simmondsia chinensis HOM05D002494 ORTHO05D002673 3.1e-45 187.6 138 69.6
Sabra10G0012600 Salix brachista HOM05D002494 ORTHO05D002673 4.1e-45 187.2 145 66.9
DCAR_027134 Daucus carota HOM05D002494 ORTHO05D002673 5.3e-45 186.8 138 68.1
Eucgr.H03640 Eucalyptus grandis HOM05D002494 ORTHO05D002673 5.3e-45 186.8 138 68.1
HanXRQChr09g0251551 Helianthus annuus HOM05D002494 ORTHO05D002673 5.3e-45 186.8 138 68.8
MSTRG.3973 Avicennia marina HOM05D002494 ORTHO05D002673 6.9e-45 186.4 138 68.1
Thhalv10019892m.g Eutrema salsugineum HOM05D002494 ORTHO05D002673 9.0e-45 186.0 181 58.6
SGA_v2.0_scaffold237G43852 Striga asiatica HOM05D002494 ORTHO05D002673 1.2e-44 185.7 138 67.4
Ciclev10004135m.g Citrus clementina HOM05D002494 ORTHO05D002673 1.5e-44 185.3 138 68.8
ECA233G5784 Erigeron canadensis HOM05D002494 ORTHO05D002673 1.5e-44 185.3 138 68.1
FvH4_4g13920 Fragaria vesca HOM05D002494 ORTHO05D002673 1.5e-44 185.3 160 61.2
FAN12G0871 Fragaria x ananassa HOM05D002494 ORTHO05D002673 1.5e-44 185.3 160 61.2
FAN17G1311 Fragaria x ananassa HOM05D002494 ORTHO05D002673 1.5e-44 185.3 160 61.2
FAN22G2205 Fragaria x ananassa HOM05D002494 ORTHO05D002673 1.5e-44 185.3 160 61.2
SalBow2G0767 Salvia bowleyana HOM05D002494 ORTHO05D002673 2.0e-44 184.9 138 67.4
Cc03_g02770 Coffea canephora HOM05D002494 ORTHO05D002673 4.5e-44 183.7 138 67.4
CAN.G290.14 Capsicum annuum HOM05D002494 ORTHO05D002673 5.8e-44 183.3 138 66.7
Migut.G00286 Erythranthe guttata HOM05D002494 ORTHO05D002673 5.8e-44 183.3 138 68.8
Potri.010G028200 Populus trichocarpa HOM05D002494 ORTHO05D002673 5.8e-44 183.3 138 68.1
Haze_01007 Corylus avellana HOM05D002494 ORTHO05D002673 7.6e-44 183.0 138 66.7
Peaxi162Scf00592g00111 Petunia axillaris HOM05D002494 ORTHO05D002673 7.6e-44 183.0 161 59.6
Solyc12g035670.3 Solanum lycopersicum HOM05D002494 ORTHO05D002673 7.6e-44 183.0 138 65.9
Oeu032696.1 Olea europaea HOM05D002494 ORTHO05D002673 1.0e-43 182.6 138 67.4
CDE04G2572 Ceratophyllum demersum HOM05D002494 ORTHO05D002673 1.3e-43 182.2 138 67.4
MD16G1179800 Malus domestica HOM05D002494 ORTHO05D002673 1.7e-43 181.8 138 66.7
Sopen12g016080 Solanum pennellii HOM05D002494 ORTHO05D002673 1.7e-43 181.8 138 65.2
Cfa015542 Carpinus fangiana HOM05D002494 ORTHO05D002673 2.2e-43 181.4 138 65.9
CsaV3_3G013900 Cucumis sativus L. HOM05D002494 ORTHO05D002673 2.2e-43 181.4 138 66.7
Sed0003410 Sechium edule HOM05D002494 ORTHO05D002673 2.2e-43 181.4 138 66.7
Zm00001eb329320 Zea mays HOM05D002494 ORTHO05D002673 2.9e-43 181.0 152 63.8
AUR62024657 Chenopodium quinoa HOM05D002494 ORTHO05D002673 5.0e-43 180.3 138 66.7
Zm00001eb329290 Zea mays HOM05D002494 ORTHO05D002673 5.0e-43 180.3 138 68.1
AUR62011813 Chenopodium quinoa HOM05D002494 ORTHO05D002673 8.4e-43 179.5 138 66.7
ClCG05G005560 Citrullus lanatus HOM05D002494 ORTHO05D002673 1.4e-42 178.7 138 65.9
MELO3C006582.2 Cucumis melo HOM05D002494 ORTHO05D002673 1.4e-42 178.7 141 64.5
Nitab4.5_0000010g0140 Nicotiana tabacum HOM05D002494 ORTHO05D002673 1.9e-42 178.3 142 62.7
Hund09628 Selenicereus undatus HOM05D002494 ORTHO05D002673 2.5e-42 177.9 138 65.2
Nitab4.5_0001505g0010 Nicotiana tabacum HOM05D002494 ORTHO05D002673 3.2e-42 177.6 140 62.9
Pp3c3_29590 Physcomitrium patens HOM05D002494 ORTHO05D002673 3.2e-42 177.6 145 62.1
EL10As5g23527 Beta vulgaris HOM05D002494 ORTHO05D002673 4.2e-42 177.2 138 65.2
Ah.02g112310 Amaranthus hybridus HOM05D002494 ORTHO05D002673 1.2e-41 175.6 138 65.2
CSS0005255 Camellia sinensis var. sinensis HOM05D002494 ORTHO05D002673 1.2e-41 175.6 130 68.5
CSS0038359 Camellia sinensis var. sinensis HOM05D002494 ORTHO05D002673 1.2e-41 175.6 130 68.5
HPP92_013653 Vanilla planifolia HOM05D002494 ORTHO05D002673 6.1e-41 173.3 138 65.2
MD13G1178600 Malus domestica HOM05D002494 ORTHO05D002673 1.0e-40 172.6 131 66.4
HPP92_013671 Vanilla planifolia HOM05D002494 ORTHO05D002673 3.0e-40 171.0 138 64.5
AagrBONN_evm.TU.Sc2ySwM_362.842 Anthoceros agrestis HOM05D002494 ORTHO05D002673 3.3e-39 167.5 138 61.6
SHI00347 Sapria himalayana HOM05D002494 ORTHO05D002673 8.2e-38 162.9 138 60.1
Mapoly0096s0011 Marchantia polymorpha HOM05D002494 ORTHO05D002673 1.1e-37 162.5 146 57.5
BcaC05g30040 Brassica carinata HOM05D002494 ORTHO05D002673 1.2e-33 149.1 90 78.9
C05p60970 Brassica napus HOM05D002494 ORTHO05D002673 3.6e-33 147.5 90 81.1
BolC5t34752H Brassica oleracea HOM05D002494 ORTHO05D002673 3.6e-33 147.5 90 81.1
Ca_30832_v3 Cicer arietinum L. HOM05D002494 ORTHO05D002673 2.3e-32 144.8 107 71.0
SMO356G0266 Selaginella moellendorffii HOM05D002494 ORTHO05D002673 2.6e-28 131.3 78 76.9
Cpa.g.sc16.69 Carica papaya HOM05D002494 ORTHO05D002673 1.6e-25 122.1 107 59.8
Psat4g010920 Pisum sativum HOM05D002494 ORTHO05D002673 6.1e-25 120.2 77 80.5
CBR_g52314 Chara braunii HOM05D002494 ORTHO05D002673 3.0e-24 117.9 138 50.0
Atru.chr4.2699 Acer truncatum HOM05D002494 ORTHO05D002673 1.1e-21 109.4 162 40.7
Actinidia23457 Actinidia chinensis HOM05D002494 ORTHO05D002673 4.5e-20 104.0 143 40.6
PRCOL_00005549 Prasinoderma coloniale HOM05D002494 ORTHO05D002673 5.7e-15 87.0 150 32.7
unitig_748.g8564 Utricularia gibba HOM05D002494 ORTHO05D002673 6.3e-14 83.6 148 35.8
BcaB03g14660 Brassica carinata HOM05D002494 ORTHO05D002673 1.1e-13 82.8 75 54.7
CARHR080780 Cardamine hirsuta HOM05D002494 ORTHO05D002673 1.8e-13 82.0 115 41.7
C05p60980 Brassica napus HOM05D002494 ORTHO05D002673 1.6e-12 79.0 82 48.8
arahy.Tifrunner.gnm1.ann1.6LA5S9 Arachis hypogaea HOM05D002494 ORTHO05D002673 1.5e-10 72.4 49 67.3
Zm00001eb329310 Zea mays HOM05D002494 ORTHO05D002673 4.2e-10 70.9 77 44.2
Zm00001eb329350 Zea mays HOM05D002494 ORTHO05D002673 4.2e-10 70.9 77 44.2
Zm00001eb094450 Zea mays HOM05D002494 ORTHO05D002673 7.2e-10 70.1 77 44.2
Mapoly0144s0009 Marchantia polymorpha HOM05D002494 ORTHO05D002673 2.7e-09 68.2 135 32.6
arahy.Tifrunner.gnm1.ann1.IQYE38 Arachis hypogaea HOM05D002494 ORTHO05D002673 1.4e-08 65.9 38 73.7
SMO364G0447 Selaginella moellendorffii HOM05D002494 ORTHO05D002673 1.7e-06 58.9 130 34.6
Zm00001eb381560 Zea mays HOM05D002494 ORTHO05D002673 6.3e-06 57.0 35 77.1


User provided reference genes

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