Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR730G0002 Trochodendron aralioides HOM05D001849 ORTHO05D004689 8.3e-82 307.0 156 100.0
GSVIVG01016718001 Vitis vinifera HOM05D001849 ORTHO05D004689 6.0e-56 221.1 154 73.4
MBI13_g01700_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 1.6e-53 213.0 155 72.9
vmacro15054 Vaccinium macrocarpon HOM05D001849 ORTHO05D004689 1.2e-51 206.8 154 69.5
Actinidia32206 Actinidia chinensis HOM05D001849 ORTHO05D004689 2.6e-51 205.7 154 70.1
Rhsim08G0241300 Rhododendron simsii HOM05D001849 ORTHO05D004689 2.9e-50 202.2 154 68.2
CSS0003623 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 3.8e-50 201.8 154 68.8
CSS0020628 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 8.4e-50 200.7 154 68.8
Cfa003503 Carpinus fangiana HOM05D001849 ORTHO05D004689 4.2e-49 198.4 154 67.5
CSS0050059 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 5.5e-49 198.0 154 68.2
Haze_16076 Corylus avellana HOM05D001849 ORTHO05D004689 1.2e-48 196.8 154 67.5
CSS0036951 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 6.0e-48 194.5 154 67.5
Manes.11G016400 Manihot esculenta HOM05D001849 ORTHO05D004689 1.5e-46 189.9 154 62.3
CiPaw.01G216000 Carya illinoinensis HOM05D001849 ORTHO05D004689 3.3e-46 188.7 154 63.0
TWI59G1440 Tripterygium wilfordii HOM05D001849 ORTHO05D004689 9.6e-46 187.2 154 64.9
QL05p003662 Quercus lobata HOM05D001849 ORTHO05D004689 1.1e-44 183.7 154 61.0
Gohir.D09G079550 Gossypium hirsutum HOM05D001849 ORTHO05D004689 1.8e-44 183.0 154 61.0
Gorai.006G094800 Gossypium raimondii HOM05D001849 ORTHO05D004689 2.0e-43 179.5 154 60.4
Lj9C535G6 Lonicera japonica HOM05D001849 ORTHO05D004689 3.4e-43 178.7 154 61.7
Duzib235G0671 Durio zibethinus HOM05D001849 ORTHO05D004689 4.5e-43 178.3 150 62.7
Duzib192G0006 Durio zibethinus HOM05D001849 ORTHO05D004689 1.0e-42 177.2 154 61.0
Gohir.A09G079900 Gossypium hirsutum HOM05D001849 ORTHO05D004689 1.7e-42 176.4 154 59.7
Potri.001G165900 Populus trichocarpa HOM05D001849 ORTHO05D004689 3.8e-42 175.3 156 62.8
COL.COLO4_30797 Corchorus olitorius HOM05D001849 ORTHO05D004689 8.4e-42 174.1 154 59.7
Ciclev10027090m.g Citrus clementina HOM05D001849 ORTHO05D004689 7.1e-41 171.0 154 60.4
Prupe.3G037400 Prunus persica HOM05D001849 ORTHO05D004689 4.6e-40 168.3 154 62.3
HPP92_022009 Vanilla planifolia HOM05D001849 ORTHO05D004689 7.9e-40 167.5 154 61.7
MD09G1178100 Malus domestica HOM05D001849 ORTHO05D004689 6.7e-39 164.5 154 59.1
Sabra01G0127400 Salix brachista HOM05D001849 ORTHO05D004689 8.7e-39 164.1 156 59.0
Duzib235G0009 Durio zibethinus HOM05D001849 ORTHO05D004689 2.5e-38 162.5 150 60.7
MD17G1148600 Malus domestica HOM05D001849 ORTHO05D004689 1.3e-37 160.2 154 57.8
Lalb_Chr10g0101331 Lupinus albus HOM05D001849 ORTHO05D004689 4.1e-36 155.2 154 57.1
PGR119G1999 Punica granatum HOM05D001849 ORTHO05D004689 6.9e-36 154.5 155 56.1
VMungo0331G1611 Vigna mungo HOM05D001849 ORTHO05D004689 5.9e-35 151.4 157 54.1
Ca_23411_v3 Cicer arietinum L. HOM05D001849 ORTHO05D004689 2.2e-34 149.4 154 53.9
Glyma.07G042000 Glycine max HOM05D001849 ORTHO05D004689 2.9e-34 149.1 153 55.6
ClCG09G001140 Citrullus lanatus HOM05D001849 ORTHO05D004689 3.8e-34 148.7 153 52.9
Sed0016273 Sechium edule HOM05D001849 ORTHO05D004689 6.5e-34 147.9 155 52.9
Lj3g0004011 Lotus japonicus HOM05D001849 ORTHO05D004689 1.9e-33 146.4 154 53.2
MELO3C024334.2 Cucumis melo HOM05D001849 ORTHO05D004689 5.5e-33 144.8 154 50.6
Aa31LG8G1350 Aethionema arabicum HOM05D001849 ORTHO05D004689 9.4e-33 144.1 154 51.9
CsaV3_7G034250 Cucumis sativus L. HOM05D001849 ORTHO05D004689 2.1e-32 142.9 155 49.7
Phvul.010G127100 Phaseolus vulgaris HOM05D001849 ORTHO05D004689 3.6e-32 142.1 154 55.2
AT3G14120 Arabidopsis thaliana HOM05D001849 ORTHO05D004689 4.6e-32 141.7 155 52.9
arahy.Tifrunner.gnm1.ann1.1RN2YG Arachis hypogaea HOM05D001849 ORTHO05D004689 4.6e-32 141.7 154 53.2
arahy.Tifrunner.gnm1.ann1.RMM65D Arachis hypogaea HOM05D001849 ORTHO05D004689 4.6e-32 141.7 154 53.2
RcHm_v2.0_Chr2g0146431 Rosa chinensis HOM05D001849 ORTHO05D004689 4.6e-32 141.7 151 56.3
Aqoxy7G04006 Aquilegia oxysepala HOM05D001849 ORTHO05D004689 1.8e-31 139.8 156 55.1
Cc04_g01050 Coffea canephora HOM05D001849 ORTHO05D004689 3.9e-31 138.7 153 55.6
A05p35330 Brassica napus HOM05D001849 ORTHO05D004689 5.1e-31 138.3 155 51.0
BolC5t34029H Brassica oleracea HOM05D001849 ORTHO05D004689 5.1e-31 138.3 156 51.9
Hund18673 Selenicereus undatus HOM05D001849 ORTHO05D004689 8.8e-31 137.5 154 55.2
BraA05t22343Z Brassica rapa HOM05D001849 ORTHO05D004689 1.5e-30 136.7 155 50.3
Sopen12g023890 Solanum pennellii HOM05D001849 ORTHO05D004689 2.0e-30 136.3 154 52.6
BcaC05g29121 Brassica carinata HOM05D001849 ORTHO05D004689 4.3e-30 135.2 156 50.6
C05p53520 Brassica napus HOM05D001849 ORTHO05D004689 4.3e-30 135.2 156 50.6
SalBow7G1889 Salvia bowleyana HOM05D001849 ORTHO05D004689 9.7e-30 134.0 154 51.3
Migut.D00924 Erythranthe guttata HOM05D001849 ORTHO05D004689 1.3e-29 133.7 154 53.2
EL10Ac7g16444 Beta vulgaris HOM05D001849 ORTHO05D004689 1.7e-29 133.3 154 52.6
Psat4g166880 Pisum sativum HOM05D001849 ORTHO05D004689 1.7e-29 133.3 154 51.9
SGA_v2.0_scaffold4G02078 Striga asiatica HOM05D001849 ORTHO05D004689 2.2e-29 132.9 154 51.9
TPR.G29992 Trifolium pratense HOM05D001849 ORTHO05D004689 2.8e-29 132.5 154 49.4
Medtr8g022010 Medicago truncatula HOM05D001849 ORTHO05D004689 3.7e-29 132.1 154 48.1
Oeu008524.4 Olea europaea HOM05D001849 ORTHO05D004689 3.7e-29 132.1 154 53.2
THA.LOC104822664 Tarenaya hassleriana HOM05D001849 ORTHO05D004689 4.8e-29 131.7 152 49.3
ATR0681G401 Amborella trichopoda HOM05D001849 ORTHO05D004689 6.3e-29 131.3 154 53.9
Carub.0003s1373 Capsella rubella HOM05D001849 ORTHO05D004689 6.3e-29 131.3 155 50.3
Thhalv10019957m.g Eutrema salsugineum HOM05D001849 ORTHO05D004689 8.2e-29 131.0 155 50.3
CDE07G1706 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 4.1e-28 128.6 114 60.5
CANSAT56G0878 Cannabis sativa HOM05D001849 ORTHO05D004689 6.9e-28 127.9 154 50.6
Lsat_1_v5_gn_4_91381 Lactuca sativa HOM05D001849 ORTHO05D004689 1.5e-27 126.7 155 48.4
FAN14G1459 Fragaria x ananassa HOM05D001849 ORTHO05D004689 2.6e-27 125.9 155 51.6
Sp3g12380 Schrenkiella parvula HOM05D001849 ORTHO05D004689 2.6e-27 125.9 155 49.0
Atru.chr12.2396 Acer truncatum HOM05D001849 ORTHO05D004689 3.4e-27 125.6 143 53.1
AUR62001443 Chenopodium quinoa HOM05D001849 ORTHO05D004689 3.4e-27 125.6 154 52.6
Cpa.g.sc169.33 Carica papaya HOM05D001849 ORTHO05D004689 5.9e-27 124.8 154 49.4
C01p50480 Brassica napus HOM05D001849 ORTHO05D004689 7.7e-27 124.4 156 50.0
A01p39550 Brassica napus HOM05D001849 ORTHO05D004689 1.3e-26 123.6 154 49.4
FvH4_6g35170 Fragaria vesca HOM05D001849 ORTHO05D004689 1.3e-26 123.6 155 51.0
BolC1t05000H Brassica oleracea HOM05D001849 ORTHO05D004689 5.0e-26 121.7 154 48.1
FAN02G0489 Fragaria x ananassa HOM05D001849 ORTHO05D004689 2.7e-24 115.9 151 52.3
FAN05G2930 Fragaria x ananassa HOM05D001849 ORTHO05D004689 2.7e-24 115.9 151 52.3
Peaxi162Scf00177g00518 Petunia axillaris HOM05D001849 ORTHO05D004689 7.9e-24 114.4 155 47.7
CDE06G0404 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 1.5e-22 110.2 127 52.8
Zm00001eb165950 Zea mays HOM05D001849 ORTHO05D004689 2.0e-22 109.8 150 46.0
FAN09G4066 Fragaria x ananassa HOM05D001849 ORTHO05D004689 2.6e-22 109.4 151 50.3
HanXRQChr09g0277131 Helianthus annuus HOM05D001849 ORTHO05D004689 4.4e-22 108.6 155 49.0
Hma1.2p1_0225F.1_g094790 Hydrangea macrophylla HOM05D001849 ORTHO05D004689 4.8e-21 105.1 141 46.8
FAN05G4033 Fragaria x ananassa HOM05D001849 ORTHO05D004689 5.3e-20 101.7 151 47.7
CAN.G1243.8 Capsicum annuum HOM05D001849 ORTHO05D004689 2.2e-18 96.3 127 49.6
ECA232G2821 Erigeron canadensis HOM05D001849 ORTHO05D004689 2.2e-18 96.3 151 46.4
AL3G26350 Arabidopsis lyrata HOM05D001849 ORTHO05D004689 4.7e-16 88.6 111 47.7
PSO724G1390 Papaver somniferum HOM05D001849 ORTHO05D004689 4.7e-16 88.6 163 41.7
PSO386G0179 Papaver somniferum HOM05D001849 ORTHO05D004689 5.2e-15 85.1 163 39.9
DCAR_026423 Daucus carota HOM05D001849 ORTHO05D004689 4.4e-14 82.0 143 37.8
AUR62009922 Chenopodium quinoa HOM05D001849 ORTHO05D004689 5.7e-14 81.6 121 47.1
Solyc12g049410.3 Solanum lycopersicum HOM05D001849 ORTHO05D004689 2.6e-11 72.8 87 50.6
Atru.chr12.2376 Acer truncatum HOM05D001849 ORTHO05D004689 7.7e-11 71.2 129 42.6
SEGI_26020 Sequoiadendron giganteum HOM05D001849 ORTHO05D004689 7.7e-11 71.2 134 42.5
Hma1.2p1_0436F.1_g152830 Hydrangea macrophylla HOM05D001849 ORTHO05D004689 1.3e-10 70.5 62 53.2
Thecc.06G124800 Theobroma cacao HOM05D001849 ORTHO05D004689 3.8e-10 68.9 65 56.9
SHI25232 Sapria himalayana HOM05D001849 ORTHO05D004689 6.1e-08 61.6 115 39.1
unitig_578.g16691 Utricularia gibba HOM05D001849 ORTHO05D004689 1.8e-07 60.1 81 46.9


User provided reference genes

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