Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR636G3548 Trochodendron aralioides HOM05D006305 ORTHO05D007984 2.2e-203 712.2 401 100.0
GSVIVG01000016001 Vitis vinifera HOM05D006305 ORTHO05D007984 2.8e-142 509.2 387 73.9
Dinv23970 Davidia involucrata HOM05D006305 ORTHO05D007984 1.1e-141 507.3 411 70.1
Manes.09G164300 Manihot esculenta HOM05D006305 ORTHO05D007984 5.9e-140 501.5 387 70.3
Gohir.D13G179200 Gossypium hirsutum HOM05D006305 ORTHO05D007984 1.0e-136 490.7 368 72.6
QL03p004578 Quercus lobata HOM05D006305 ORTHO05D007984 1.4e-136 490.3 411 69.3
Gorai.013G204500 Gossypium raimondii HOM05D006305 ORTHO05D007984 6.8e-136 488.0 370 71.9
TWI56G0624 Tripterygium wilfordii HOM05D006305 ORTHO05D007984 8.9e-136 487.6 399 67.7
CANSAT54G0217 Cannabis sativa HOM05D006305 ORTHO05D007984 1.2e-135 487.3 382 67.5
Eucgr.H04470 Eucalyptus grandis HOM05D006305 ORTHO05D007984 1.2e-135 487.3 397 71.3
RcHm_v2.0_Chr3g0454231 Rosa chinensis HOM05D006305 ORTHO05D007984 1.5e-135 486.9 386 65.8
MD04G1208500 Malus domestica HOM05D006305 ORTHO05D007984 2.0e-135 486.5 397 70.3
Gohir.A13G173500 Gossypium hirsutum HOM05D006305 ORTHO05D007984 2.6e-135 486.1 381 72.4
FAN14G0751 Fragaria x ananassa HOM05D006305 ORTHO05D007984 3.4e-135 485.7 389 67.6
FAN14G5210 Fragaria x ananassa HOM05D006305 ORTHO05D007984 3.4e-135 485.7 389 67.6
Lj9A683T26 Lonicera japonica HOM05D006305 ORTHO05D007984 1.7e-134 483.4 404 67.8
FAN05G5097 Fragaria x ananassa HOM05D006305 ORTHO05D007984 4.9e-134 481.9 389 67.1
CSS0018445 Camellia sinensis var. sinensis HOM05D006305 ORTHO05D007984 1.1e-133 480.7 393 70.2
Sabra05G0037100 Salix brachista HOM05D006305 ORTHO05D007984 1.4e-133 480.3 399 72.7
FvH4_6g05460 Fragaria vesca HOM05D006305 ORTHO05D007984 1.8e-133 479.9 389 67.1
CSS0021232 Camellia sinensis var. sinensis HOM05D006305 ORTHO05D007984 5.4e-133 478.4 396 70.5
Rhsim05G0143900 Rhododendron simsii HOM05D006305 ORTHO05D007984 9.2e-133 477.6 391 71.1
Phvul.007G181700 Phaseolus vulgaris HOM05D006305 ORTHO05D007984 1.2e-132 477.2 393 69.5
VMungo0720G1654 Vigna mungo HOM05D006305 ORTHO05D007984 1.6e-132 476.9 377 75.9
Medtr1g082570 Medicago truncatula HOM05D006305 ORTHO05D007984 2.7e-132 476.1 394 66.5
Atru.chr2.472 Acer truncatum HOM05D006305 ORTHO05D007984 4.6e-132 475.3 406 64.8
CiPaw.07G015100 Carya illinoinensis HOM05D006305 ORTHO05D007984 7.8e-132 474.6 388 65.2
Ca_10097_v3 Cicer arietinum L. HOM05D006305 ORTHO05D007984 2.3e-131 473.0 394 66.2
Thecc.05G307300 Theobroma cacao HOM05D006305 ORTHO05D007984 2.3e-131 473.0 387 68.5
arahy.Tifrunner.gnm1.ann1.84BFE2 Arachis hypogaea HOM05D006305 ORTHO05D007984 3.9e-131 472.2 406 71.2
Lj5g0026498 Lotus japonicus HOM05D006305 ORTHO05D007984 3.9e-131 472.2 376 75.0
Potri.005G036700 Populus trichocarpa HOM05D006305 ORTHO05D007984 1.1e-130 470.7 407 69.3
Cc02_g33730 Coffea canephora HOM05D006305 ORTHO05D007984 3.3e-130 469.2 396 67.2
FAN05G0068 Fragaria x ananassa HOM05D006305 ORTHO05D007984 9.5e-130 467.6 389 65.6
ClCG08G002270 Citrullus lanatus HOM05D006305 ORTHO05D007984 4.7e-129 465.3 388 64.4
Hund21683 Selenicereus undatus HOM05D006305 ORTHO05D007984 1.8e-128 463.4 376 74.5
EL10Ac4g09328 Beta vulgaris HOM05D006305 ORTHO05D007984 2.3e-128 463.0 389 64.3
Glyma.10G156300 Glycine max HOM05D006305 ORTHO05D007984 4.0e-128 462.2 390 63.8
Psat0ss6702g0320 Pisum sativum HOM05D006305 ORTHO05D007984 8.9e-128 461.1 394 67.3
Lsat_1_v5_gn_2_67520 Lactuca sativa HOM05D006305 ORTHO05D007984 2.0e-127 459.9 365 68.2
Nitab4.5_0002756g0070 Nicotiana tabacum HOM05D006305 ORTHO05D007984 2.0e-127 459.9 399 65.4
Ah.06g189130 Amaranthus hybridus HOM05D006305 ORTHO05D007984 2.6e-127 459.5 397 64.5
CAN.G479.41 Capsicum annuum HOM05D006305 ORTHO05D007984 5.8e-127 458.4 397 63.2
PGR031G3204 Punica granatum HOM05D006305 ORTHO05D007984 1.3e-126 457.2 395 68.4
PGSC0003DMG400024658 Solanum tuberosum HOM05D006305 ORTHO05D007984 2.9e-126 456.1 391 65.7
SGA_v2.0_scaffold34G13953 Striga asiatica HOM05D006305 ORTHO05D007984 2.9e-126 456.1 394 65.0
Hma1.2p1_0666F.1_g199520 Hydrangea macrophylla HOM05D006305 ORTHO05D007984 6.4e-126 454.9 317 76.3
CDE11G1040 Ceratophyllum demersum HOM05D006305 ORTHO05D007984 1.1e-125 454.1 380 63.9
arahy.Tifrunner.gnm1.ann1.39Z7HW Arachis hypogaea HOM05D006305 ORTHO05D007984 1.9e-125 453.4 412 68.7
Solyc03g115580.4 Solanum lycopersicum HOM05D006305 ORTHO05D007984 2.0e-124 449.9 396 66.2
Aqoxy5G04250 Aquilegia oxysepala HOM05D006305 ORTHO05D007984 4.6e-124 448.7 393 62.6
Peaxi162Scf00274g00026 Petunia axillaris HOM05D006305 ORTHO05D007984 6.0e-124 448.4 435 59.3
Sopen03g034570 Solanum pennellii HOM05D006305 ORTHO05D007984 6.0e-124 448.4 392 69.9
HanXRQChr15g0472081 Helianthus annuus HOM05D006305 ORTHO05D007984 1.3e-123 447.2 368 68.5
SalBow6G6985 Salvia bowleyana HOM05D006305 ORTHO05D007984 1.1e-122 444.1 402 61.9
ECA238G3439 Erigeron canadensis HOM05D006305 ORTHO05D007984 1.5e-122 443.7 375 70.9
DCAR_029432 Daucus carota HOM05D006305 ORTHO05D007984 1.9e-122 443.4 385 70.6
vmacro19639 Vaccinium macrocarpon HOM05D006305 ORTHO05D007984 3.3e-122 442.6 459 59.0
A05p42370 Brassica napus HOM05D006305 ORTHO05D007984 4.3e-122 442.2 399 61.9
BraA05t23013Z Brassica rapa HOM05D006305 ORTHO05D007984 4.3e-122 442.2 399 61.9
Thhalv10020823m.g Eutrema salsugineum HOM05D006305 ORTHO05D007984 4.3e-122 442.2 390 62.3
Lalb_Chr02g0148341 Lupinus albus HOM05D006305 ORTHO05D007984 5.6e-122 441.8 395 68.9
AL3G15630 Arabidopsis lyrata HOM05D006305 ORTHO05D007984 1.2e-121 440.7 388 66.0
BcaC05g30009 Brassica carinata HOM05D006305 ORTHO05D007984 1.2e-121 440.7 404 59.9
C05p61980 Brassica napus HOM05D006305 ORTHO05D007984 1.2e-121 440.7 404 59.9
BolC5t34858H Brassica oleracea HOM05D006305 ORTHO05D007984 2.1e-121 439.9 404 59.7
MSTRG.306 Avicennia marina HOM05D006305 ORTHO05D007984 3.6e-121 439.1 390 62.8
Sp3g04060 Schrenkiella parvula HOM05D006305 ORTHO05D007984 1.1e-120 437.6 394 58.9
BcaC05g30168 Brassica carinata HOM05D006305 ORTHO05D007984 1.8e-120 436.8 407 61.9
FAN02G0061 Fragaria x ananassa HOM05D006305 ORTHO05D007984 1.8e-120 436.8 388 62.6
Migut.F01514 Erythranthe guttata HOM05D006305 ORTHO05D007984 2.3e-120 436.4 401 61.1
HPP92_015091 Vanilla planifolia HOM05D006305 ORTHO05D007984 8.9e-120 434.5 397 60.7
Carub.0003s0446 Capsella rubella HOM05D006305 ORTHO05D007984 2.0e-119 433.3 386 63.0
Ciclev10001229m.g Citrus clementina HOM05D006305 ORTHO05D007984 3.4e-119 432.6 401 62.1
Prupe.6G329400 Prunus persica HOM05D006305 ORTHO05D007984 2.9e-118 429.5 277 77.3
ATR0620G066 Amborella trichopoda HOM05D006305 ORTHO05D007984 3.2e-117 426.0 412 60.0
Aa31LG5G15590 Aethionema arabicum HOM05D006305 ORTHO05D007984 5.4e-117 425.2 422 62.3
Nn3g18889 Nelumbo nucifera HOM05D006305 ORTHO05D007984 7.1e-117 424.9 280 84.3
AUR62005086 Chenopodium quinoa HOM05D006305 ORTHO05D007984 1.3e-115 420.6 285 73.7
AUR62000888 Chenopodium quinoa HOM05D006305 ORTHO05D007984 1.7e-115 420.2 285 73.3
THA.LOC104820089 Tarenaya hassleriana HOM05D006305 ORTHO05D007984 8.6e-115 417.9 411 58.4
MBI04_g21739_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 3.3e-114 416.0 284 74.6
COL.COLO4_19840 Corchorus olitorius HOM05D006305 ORTHO05D007984 8.9e-112 407.9 231 84.8
BcaC05g30019 Brassica carinata HOM05D006305 ORTHO05D007984 1.2e-111 407.5 404 56.9
PSO782G4398 Papaver somniferum HOM05D006305 ORTHO05D007984 1.7e-110 403.7 393 62.1
unitig_746.g26625 Utricularia gibba HOM05D006305 ORTHO05D007984 2.9e-110 402.9 302 67.2
PSO063G7033 Papaver somniferum HOM05D006305 ORTHO05D007984 3.8e-110 402.5 393 63.4
Zm00001eb043410 Zea mays HOM05D006305 ORTHO05D007984 7.1e-109 398.3 400 58.0
Cfa006552 Carpinus fangiana HOM05D006305 ORTHO05D007984 4.6e-108 395.6 295 76.3
Haze_04230 Corylus avellana HOM05D006305 ORTHO05D007984 4.6e-108 395.6 409 62.1
MELO3C025022.2 Cucumis melo HOM05D006305 ORTHO05D007984 7.3e-106 388.3 301 69.1
Os10g0518900 Oryza sativa ssp. japonica HOM05D006305 ORTHO05D007984 1.4e-104 384.0 279 69.9
CsaV3_6G002610 Cucumis sativus L. HOM05D006305 ORTHO05D007984 5.8e-103 378.6 303 66.7
Sed0018566 Sechium edule HOM05D006305 ORTHO05D007984 1.7e-102 377.1 297 66.3
Pp3c6_29610 Physcomitrium patens HOM05D006305 ORTHO05D007984 3.2e-93 346.3 401 48.6
Mapoly0128s0010 Marchantia polymorpha HOM05D006305 ORTHO05D007984 7.9e-92 341.7 356 62.1
AT3G05210 Arabidopsis thaliana HOM05D006305 ORTHO05D007984 1.8e-91 340.5 283 67.1
Ciclev10002028m.g Citrus clementina HOM05D006305 ORTHO05D007984 6.7e-91 338.6 252 69.0
Duzib106G1918 Durio zibethinus HOM05D006305 ORTHO05D007984 7.4e-90 335.1 403 54.6
SMO146G0211 Selaginella moellendorffii HOM05D006305 ORTHO05D007984 3.6e-89 332.8 203 76.8
CBR_g4857 Chara braunii HOM05D006305 ORTHO05D007984 3.4e-87 326.2 289 57.8
TPR.G22794 Trifolium pratense HOM05D006305 ORTHO05D007984 3.4e-87 326.2 236 71.6
Nitab4.5_0001211g0080 Nicotiana tabacum HOM05D006305 ORTHO05D007984 1.3e-86 324.3 399 52.6
Ciclev10003828m.g Citrus clementina HOM05D006305 ORTHO05D007984 3.2e-85 319.7 313 56.5
Sc16g0008400 Simmondsia chinensis HOM05D006305 ORTHO05D007984 7.9e-84 315.1 247 68.0
Hma1.2p1_0666F.1_g199530 Hydrangea macrophylla HOM05D006305 ORTHO05D007984 6.2e-81 305.4 197 77.2
Cpa.g.sc1183.2 Carica papaya HOM05D006305 ORTHO05D007984 1.8e-75 287.3 413 44.8
MBI04_g44620_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 7.6e-71 271.9 211 68.2
CARHR079550 Cardamine hirsuta HOM05D006305 ORTHO05D007984 5.5e-69 265.8 147 83.0
AagrBONN_evm.TU.Sc2ySwM_369.531 Anthoceros agrestis HOM05D006305 ORTHO05D007984 1.8e-64 250.8 265 50.6
Ciclev10003460m.g Citrus clementina HOM05D006305 ORTHO05D007984 3.4e-63 246.5 253 56.1
Cre03.g196651 Chlamydomonas reinhardtii HOM05D006305 ORTHO05D007984 5.0e-62 242.7 196 59.2
Ciclev10003373m.g Citrus clementina HOM05D006305 ORTHO05D007984 3.6e-60 236.5 275 51.6
Cfa026476 Carpinus fangiana HOM05D006305 ORTHO05D007984 7.5e-42 175.6 217 39.6
PRCOL_00003423 Prasinoderma coloniale HOM05D006305 ORTHO05D007984 9.7e-42 175.3 188 45.2
TPR.G7405 Trifolium pratense HOM05D006305 ORTHO05D007984 2.2e-33 147.5 155 61.9
SalBow6G3462 Salvia bowleyana HOM05D006305 ORTHO05D007984 5.9e-31 139.4 153 56.2
MCO01G606 Micromonas commoda HOM05D006305 ORTHO05D007984 1.7e-30 137.9 194 37.1
Glyma.20G232002 Glycine max HOM05D006305 ORTHO05D007984 5.6e-21 106.3 78 71.8
MBI04_g33407_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 6.6e-14 82.8 130 46.9
Pp3c16_18520 Physcomitrium patens HOM05D006305 ORTHO05D007984 5.2e-11 73.2 168 32.7
Cpa.g.sc48.16 Carica papaya HOM05D006305 ORTHO05D007984 7.5e-10 69.3 102 44.1
MELO3C033326.2 Cucumis melo HOM05D006305 ORTHO05D168382 4.1e-08 63.5 34 85.3
Atru.chr11.1544 Acer truncatum HOM05D006305 ORTHO05D007984 3.9e-06 57.0 90 43.3


User provided reference genes

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