Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR629G0611 Trochodendron aralioides HOM05D001486 ORTHO05D004921 0.0e+00 1956.0 990 100.0
Lj3A864G85 Lonicera japonica HOM05D001486 ORTHO05D004921 0.0e+00 1703.0 988 85.4
Duzib268G0355 Durio zibethinus HOM05D001486 ORTHO05D004921 0.0e+00 1693.3 988 86.0
QL03p035815 Quercus lobata HOM05D001486 ORTHO05D004921 0.0e+00 1692.9 988 85.9
Dinv07730 Davidia involucrata HOM05D001486 ORTHO05D004921 0.0e+00 1685.6 988 84.9
Thecc.02G292500 Theobroma cacao HOM05D001486 ORTHO05D004921 0.0e+00 1685.2 988 85.3
Gorai.005G157100 Gossypium raimondii HOM05D001486 ORTHO05D004921 0.0e+00 1680.6 988 84.6
Gohir.D02G139700 Gossypium hirsutum HOM05D001486 ORTHO05D004921 0.0e+00 1680.2 988 84.5
Manes.17G083900 Manihot esculenta HOM05D001486 ORTHO05D004921 0.0e+00 1676.0 988 84.1
Haze_10881 Corylus avellana HOM05D001486 ORTHO05D004921 0.0e+00 1672.1 1053 81.1
Atru.chr11.925 Acer truncatum HOM05D001486 ORTHO05D004921 0.0e+00 1669.8 988 84.3
CSS0037038 Camellia sinensis var. sinensis HOM05D001486 ORTHO05D004921 0.0e+00 1669.8 988 84.9
Actinidia12394 Actinidia chinensis HOM05D001486 ORTHO05D004921 0.0e+00 1657.9 988 84.0
Glyma.08G045900 Glycine max HOM05D001486 ORTHO05D004921 0.0e+00 1654.8 988 83.2
Potri.008G134800 Populus trichocarpa HOM05D001486 ORTHO05D004921 0.0e+00 1654.0 988 82.6
COL.COLO4_16588 Corchorus olitorius HOM05D001486 ORTHO05D004921 0.0e+00 1651.3 988 83.6
Glyma.05G238800 Glycine max HOM05D001486 ORTHO05D004921 0.0e+00 1650.6 988 82.8
TWI74G0959 Tripterygium wilfordii HOM05D001486 ORTHO05D004921 0.0e+00 1650.2 990 83.3
Actinidia36627 Actinidia chinensis HOM05D001486 ORTHO05D004921 0.0e+00 1648.6 988 83.6
TPR.G19252 Trifolium pratense HOM05D001486 ORTHO05D004921 0.0e+00 1647.5 988 82.8
Ca_17277_v3 Cicer arietinum L. HOM05D001486 ORTHO05D004921 0.0e+00 1647.1 988 82.8
Aqoxy3G03310 Aquilegia oxysepala HOM05D001486 ORTHO05D004921 0.0e+00 1641.3 988 82.7
Prupe.1G333300 Prunus persica HOM05D001486 ORTHO05D004921 0.0e+00 1640.2 988 82.9
arahy.Tifrunner.gnm1.ann1.FK3VI9 Arachis hypogaea HOM05D001486 ORTHO05D004921 0.0e+00 1636.3 988 82.2
Nn4g24372 Nelumbo nucifera HOM05D001486 ORTHO05D004921 0.0e+00 1635.9 938 87.2
arahy.Tifrunner.gnm1.ann1.WZE3XK Arachis hypogaea HOM05D001486 ORTHO05D004921 0.0e+00 1634.4 988 82.2
Medtr8g105290 Medicago truncatula HOM05D001486 ORTHO05D004921 0.0e+00 1632.8 988 82.1
Psat7g007960 Pisum sativum HOM05D001486 ORTHO05D004921 0.0e+00 1628.2 988 81.8
VMungo0251G0466 Vigna mungo HOM05D001486 ORTHO05D004921 0.0e+00 1627.1 987 81.7
Aqoxy7G03241 Aquilegia oxysepala HOM05D001486 ORTHO05D004921 0.0e+00 1626.3 988 82.2
Lj4g0010019 Lotus japonicus HOM05D001486 ORTHO05D004921 0.0e+00 1624.8 988 82.2
CANSAT01G0610 Cannabis sativa HOM05D001486 ORTHO05D004921 0.0e+00 1623.2 988 82.1
Phvul.002G321200 Phaseolus vulgaris HOM05D001486 ORTHO05D004921 0.0e+00 1622.4 988 81.4
Sabra08G0102800 Salix brachista HOM05D001486 ORTHO05D004921 0.0e+00 1621.7 1002 80.9
Ciclev10014036m.g Citrus clementina HOM05D001486 ORTHO05D004921 0.0e+00 1620.9 988 81.6
Cpa.g.sc2.194 Carica papaya HOM05D001486 ORTHO05D004921 0.0e+00 1620.1 992 81.9
Duzib251G0538 Durio zibethinus HOM05D001486 ORTHO05D004921 0.0e+00 1619.8 988 82.8
RcHm_v2.0_Chr4g0443061 Rosa chinensis HOM05D001486 ORTHO05D004921 0.0e+00 1604.0 988 80.4
Hma1.2p1_0705F.1_g206910 Hydrangea macrophylla HOM05D001486 ORTHO05D004921 0.0e+00 1603.2 988 82.5
SalBow2G2685 Salvia bowleyana HOM05D001486 ORTHO05D004921 0.0e+00 1597.4 1008 79.6
MSTRG.2128 Avicennia marina HOM05D001486 ORTHO05D004921 0.0e+00 1596.6 985 80.0
MD13G1020400 Malus domestica HOM05D001486 ORTHO05D004921 0.0e+00 1596.6 989 81.5
THA.LOC104823681 Tarenaya hassleriana HOM05D001486 ORTHO05D004921 0.0e+00 1596.6 988 80.9
Eucgr.G02106 Eucalyptus grandis HOM05D001486 ORTHO05D004921 0.0e+00 1595.9 989 80.4
Lalb_Chr05g0222211 Lupinus albus HOM05D001486 ORTHO05D004921 0.0e+00 1595.5 980 80.3
FvH4_4g33560 Fragaria vesca HOM05D001486 ORTHO05D004921 0.0e+00 1594.3 988 79.4
Migut.E00481 Erythranthe guttata HOM05D001486 ORTHO05D004921 0.0e+00 1593.2 985 80.9
FAN22G2372 Fragaria x ananassa HOM05D001486 ORTHO05D004921 0.0e+00 1591.6 988 79.3
Lalb_Chr09g0330891 Lupinus albus HOM05D001486 ORTHO05D004921 0.0e+00 1590.9 988 79.8
FAN07G1595 Fragaria x ananassa HOM05D001486 ORTHO05D004921 0.0e+00 1590.1 988 79.4
FAN12G0503 Fragaria x ananassa HOM05D001486 ORTHO05D004921 0.0e+00 1586.6 988 79.0
FAN17G1739 Fragaria x ananassa HOM05D001486 ORTHO05D004921 0.0e+00 1580.1 988 78.5
PGR142G2431 Punica granatum HOM05D001486 ORTHO05D004921 0.0e+00 1574.7 990 79.4
CAN.G149.16 Capsicum annuum HOM05D001486 ORTHO05D004921 0.0e+00 1574.3 988 79.7
vmacro10693 Vaccinium macrocarpon HOM05D001486 ORTHO05D004921 0.0e+00 1573.5 1045 77.1
SGA_v2.0_scaffold23G10214 Striga asiatica HOM05D001486 ORTHO05D004921 0.0e+00 1568.1 985 80.1
Sopen07g004030 Solanum pennellii HOM05D001486 ORTHO05D004921 0.0e+00 1567.4 988 79.8
EL10Ac3g06288 Beta vulgaris HOM05D001486 ORTHO05D004921 0.0e+00 1563.5 988 79.4
DCAR_007329 Daucus carota HOM05D001486 ORTHO05D004921 0.0e+00 1561.2 988 78.1
Solyc07g008160.3 Solanum lycopersicum HOM05D001486 ORTHO05D004921 0.0e+00 1553.1 988 78.9
Sed0010499 Sechium edule HOM05D001486 ORTHO05D004921 0.0e+00 1544.6 988 77.6
Cc04_g10510 Coffea canephora HOM05D001486 ORTHO05D004921 0.0e+00 1537.3 988 78.3
HanXRQChr08g0212501 Helianthus annuus HOM05D001486 ORTHO05D004921 0.0e+00 1536.2 991 77.2
Ah.13g072990 Amaranthus hybridus HOM05D001486 ORTHO05D004921 0.0e+00 1532.7 988 78.5
Rhsim09G0089500 Rhododendron simsii HOM05D001486 ORTHO05D004921 0.0e+00 1531.2 1060 74.2
AL1G26870 Arabidopsis lyrata HOM05D001486 ORTHO05D004921 0.0e+00 1528.8 988 78.2
AT1G14850 Arabidopsis thaliana HOM05D001486 ORTHO05D004921 0.0e+00 1528.8 988 78.2
Thhalv10006562m.g Eutrema salsugineum HOM05D001486 ORTHO05D004921 0.0e+00 1525.8 988 78.3
Carub.0001s1464 Capsella rubella HOM05D001486 ORTHO05D004921 0.0e+00 1523.8 988 77.9
MELO3C026441.2 Cucumis melo HOM05D001486 ORTHO05D004921 0.0e+00 1523.1 990 77.0
ECA233G0786 Erigeron canadensis HOM05D001486 ORTHO05D004921 0.0e+00 1522.3 980 77.8
CARHR015390 Cardamine hirsuta HOM05D001486 ORTHO05D004921 0.0e+00 1521.5 988 77.9
Hund13366 Selenicereus undatus HOM05D001486 ORTHO05D004921 0.0e+00 1518.4 1046 74.2
C05p12830 Brassica napus HOM05D001486 ORTHO05D004921 0.0e+00 1515.4 988 77.9
Aa31LG1G260 Aethionema arabicum HOM05D001486 ORTHO05D004921 0.0e+00 1513.4 992 76.8
BcaB02g06554 Brassica carinata HOM05D001486 ORTHO05D004921 0.0e+00 1513.0 988 77.5
BolC8t52091H Brassica oleracea HOM05D001486 ORTHO05D004921 0.0e+00 1513.0 988 77.1
AUR62002589 Chenopodium quinoa HOM05D001486 ORTHO05D004921 0.0e+00 1512.7 1012 76.0
C08p45360 Brassica napus HOM05D001486 ORTHO05D004921 0.0e+00 1512.3 988 77.2
CsaV3_5G015740 Cucumis sativus L. HOM05D001486 ORTHO05D004921 0.0e+00 1512.3 988 76.3
BcaC07g41534 Brassica carinata HOM05D001486 ORTHO05D004921 0.0e+00 1511.9 988 77.0
PSO782G0822 Papaver somniferum HOM05D001486 ORTHO05D004921 0.0e+00 1510.7 988 76.9
BcaC05g25406 Brassica carinata HOM05D001486 ORTHO05D004921 0.0e+00 1510.0 988 77.5
BolC5t30028H Brassica oleracea HOM05D001486 ORTHO05D004921 0.0e+00 1510.0 988 77.5
PSO063G3102 Papaver somniferum HOM05D001486 ORTHO05D004921 0.0e+00 1509.2 988 76.7
ClCG07G005610 Citrullus lanatus HOM05D001486 ORTHO05D004921 0.0e+00 1508.0 990 76.6
BraA09t41545Z Brassica rapa HOM05D001486 ORTHO05D004921 0.0e+00 1506.9 988 77.1
Sp1g13290 Schrenkiella parvula HOM05D001486 ORTHO05D004921 0.0e+00 1505.3 988 77.3
Lsat_1_v5_gn_8_46521 Lactuca sativa HOM05D001486 ORTHO05D004921 0.0e+00 1504.6 989 77.1
A09p61750 Brassica napus HOM05D001486 ORTHO05D004921 0.0e+00 1500.0 988 77.0
Sc11g0004180 Simmondsia chinensis HOM05D001486 ORTHO05D004921 0.0e+00 1498.8 988 76.1
Oeu064208.1 Olea europaea HOM05D001486 ORTHO05D004921 0.0e+00 1497.6 988 75.7
BraA06t24267Z Brassica rapa HOM05D001486 ORTHO05D004921 0.0e+00 1496.9 988 76.8
Peaxi162Scf00376g00816 Petunia axillaris HOM05D001486 ORTHO05D004921 0.0e+00 1494.2 936 80.2
BcaB08g34420 Brassica carinata HOM05D001486 ORTHO05D004921 0.0e+00 1481.8 985 76.2
AUR62030013 Chenopodium quinoa HOM05D001486 ORTHO05D004921 0.0e+00 1463.4 1106 69.5
ATR0753G157 Amborella trichopoda HOM05D001486 ORTHO05D004921 0.0e+00 1421.0 991 72.9
HPP92_002282 Vanilla planifolia HOM05D001486 ORTHO05D004921 0.0e+00 1382.9 989 70.8
Os06g0305200 Oryza sativa ssp. japonica HOM05D001486 ORTHO05D004921 0.0e+00 1365.5 986 69.4
Dinv10475 Davidia involucrata HOM05D001486 ORTHO05D004921 0.0e+00 1359.7 799 85.5
HanXRQChr12g0363231 Helianthus annuus HOM05D001486 ORTHO05D004921 0.0e+00 1349.3 936 73.9
Gohir.A03G115400 Gossypium hirsutum HOM05D001486 ORTHO05D004921 0.0e+00 1331.6 799 84.0
CiPaw.06G051900 Carya illinoinensis HOM05D001486 ORTHO05D004921 0.0e+00 1321.6 800 83.8
Zm00001eb009110 Zea mays HOM05D001486 ORTHO05D004921 0.0e+00 1266.5 927 67.9
A06p10890 Brassica napus HOM05D001486 ORTHO05D004921 0.0e+00 1266.1 858 75.4
CAN.G601.2 Capsicum annuum HOM05D001486 ORTHO05D004921 0.0e+00 1243.4 799 78.8
Zm00001eb399840 Zea mays HOM05D001486 ORTHO05D004921 0.0e+00 1237.2 978 64.4
Hma1.2p1_0277F.1_g111740 Hydrangea macrophylla HOM05D001486 ORTHO05D004921 0.0e+00 1228.0 863 75.3
Peaxi162Scf01391g00116 Petunia axillaris HOM05D001486 ORTHO05D004921 0.0e+00 1177.2 991 64.0
Mapoly0035s0137 Marchantia polymorpha HOM05D001486 ORTHO05D004921 0.0e+00 1142.1 1007 59.5
Pp3c8_3720 Physcomitrium patens HOM05D001486 ORTHO05D004921 0.0e+00 1138.3 1017 58.8
AagrBONN_evm.TU.Sc2ySwM_362.1455 Anthoceros agrestis HOM05D001486 ORTHO05D004921 0.0e+00 1131.3 1005 58.9
SEGI_07920 Sequoiadendron giganteum HOM05D001486 ORTHO05D004921 0.0e+00 1101.3 848 65.7
MD16G1018500 Malus domestica HOM05D001486 ORTHO05D004921 0.0e+00 1087.8 752 73.8
Nitab4.5_0004576g0040 Nicotiana tabacum HOM05D001486 ORTHO05D004921 1.4e-296 1023.1 869 62.7
Peaxi162Scf01152g00010 Petunia axillaris HOM05D001486 ORTHO05D004921 7.7e-290 1000.7 975 58.2
Nitab4.5_0010421g0010 Nicotiana tabacum HOM05D001486 ORTHO05D004921 3.0e-278 962.2 869 59.7
Peaxi162Scf00047g00710 Petunia axillaris HOM05D001486 ORTHO05D004921 1.4e-270 936.8 780 64.4
CDE06G1861 Ceratophyllum demersum HOM05D001486 ORTHO05D004921 2.0e-253 879.8 579 74.6
Lj1g0014898 Lotus japonicus HOM05D001486 ORTHO05D004921 1.3e-249 867.1 585 76.1
Peaxi162Scf01152g00113 Petunia axillaris HOM05D001486 ORTHO05D004921 6.6e-225 785.0 711 61.3
unitig_27.g25160 Utricularia gibba HOM05D001486 ORTHO05D004921 5.1e-217 758.8 615 65.2
Carub.0127s0003 Capsella rubella HOM05D001486 ORTHO05D004921 3.4e-197 693.0 898 46.3
GSVIVG01011661001 Vitis vinifera HOM05D001486 ORTHO05D004921 4.6e-194 682.6 368 88.9
ECA247G0951 Erigeron canadensis HOM05D001486 ORTHO05D004921 7.2e-179 632.1 748 49.2
AL1G32070 Arabidopsis lyrata HOM05D001486 ORTHO05D004921 3.6e-162 576.6 475 64.4
CDE07G1854 Ceratophyllum demersum HOM05D001486 ORTHO05D004921 8.1e-114 416.0 322 68.6
GSVIVG01011662001 Vitis vinifera HOM05D001486 ORTHO05D004921 1.1e-113 415.6 230 90.9
RcHm_v2.0_Chr2g0167011 Rosa chinensis HOM05D001486 ORTHO05D004921 4.9e-111 406.8 429 54.8
CDE07G0203 Ceratophyllum demersum HOM05D001486 ORTHO05D004921 5.6e-107 393.3 445 51.2
PRCOL_00002396 Prasinoderma coloniale HOM05D001486 ORTHO05D004921 1.3e-90 339.0 964 31.5
Cre09.g394350 Chlamydomonas reinhardtii HOM05D001486 ORTHO05D004921 4.1e-81 307.4 1177 26.7
MD16G1018600 Malus domestica HOM05D001486 ORTHO05D004921 2.2e-79 301.6 210 75.2
MCO15G435 Micromonas commoda HOM05D001486 ORTHO05D004921 3.2e-78 297.7 1160 27.6
unitig_27.g25159 Utricularia gibba HOM05D001486 ORTHO05D004921 1.2e-77 295.8 203 71.4
CAN.G601.1 Capsicum annuum HOM05D001486 ORTHO05D004921 8.5e-71 273.1 165 79.4
FvH4_1g18130 Fragaria vesca HOM05D001486 ORTHO05D004921 1.6e-69 268.9 155 76.8
CDE06G1153 Ceratophyllum demersum HOM05D001486 ORTHO05D004921 1.4e-49 202.6 123 76.4
SGA_v2.0_scaffold23G10209 Striga asiatica HOM05D001486 ORTHO05D004921 6.5e-47 193.7 102 90.2
Pp3c3_36410 Physcomitrium patens HOM05D001486 ORTHO05D004921 2.3e-44 185.3 190 53.7
CARHR227050 Cardamine hirsuta HOM05D001486 ORTHO05D004921 9.5e-38 163.3 159 55.3
AL2G18360 Arabidopsis lyrata HOM05D001486 ORTHO05D004921 4.4e-35 154.5 344 34.9
Zm00001eb235300 Zea mays HOM05D001486 ORTHO05D004921 1.7e-34 152.5 129 61.2
BcaC09g49263 Brassica carinata HOM05D001486 ORTHO05D012131 8.9e-28 130.2 112 60.7
Cfa024881 Carpinus fangiana HOM05D005623 ORTHO05D007130 1.7e-26 125.9 756 23.5
BcaC01g04114 Brassica carinata HOM05D001486 ORTHO05D012131 4.1e-25 121.3 102 61.8
ClCG01G015310 Citrullus lanatus HOM05D001486 ORTHO05D004921 1.6e-24 119.4 56 96.4
SEGI_12550 Sequoiadendron giganteum HOM05D001486 ORTHO05D004921 7.8e-24 117.1 65 80.0
ClCG09G011850 Citrullus lanatus HOM05D004959 ORTHO05D005961 5.0e-23 114.4 67 76.1
GSVIVG01026805001 Vitis vinifera HOM05D001486 ORTHO05D004921 3.7e-18 98.2 70 70.0
AL3G34910 Arabidopsis lyrata HOM05D001486 ORTHO05D004921 6.4e-18 97.4 140 44.3
GSVIVG01001572001 Vitis vinifera HOM05D001486 ORTHO05D004921 2.7e-16 92.0 112 52.7
Hma1.2p1_0277F.1_g111730 Hydrangea macrophylla HOM05D001486 ORTHO05D004921 1.5e-14 86.3 53 77.4
Hma1.2p1_0705F.1_g206905 Hydrangea macrophylla HOM05D001486 ORTHO05D004921 1.5e-14 86.3 53 77.4
FvH4_4g10520 Fragaria vesca HOM05D002057 ORTHO05D004921 5.4e-09 67.8 34 85.3
Zm00001eb334690 Zea mays HOM05D001486 ORTHO05D037216 9.2e-09 67.0 50 66.0
SMO306G0002 Selaginella moellendorffii HOM05D065592 ORTHO05D004921 8.6e-07 60.5 160 28.1
SMO270G0006 Selaginella moellendorffii HOM05D065592 ORTHO05D004921 5.6e-06 57.8 160 28.1


User provided reference genes

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