Gene: Manes.17G083900

General Information

Structural Information

Species Manihot esculenta
Gene Identifier Manes.17G083900
Transcript Identifier Manes.17G083900.1
Gene Type Coding gene
Location Chromosome17 : 29036595-29047027 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D001486
#Genes/#Species 428/100
Phylogenetic origin

ID ORTHO05D004921
#Genes/#Species 168/95
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate
Block Duplication Block duplicate

Labels

Identifiers

id Manes.17G083900.v8.1
pacid 50289547

Descriptions

Ortholog descriptions

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006913	IEA	InterPro	nucleocytoplasmic transport
GO:0006661	ISO	PLAZA Homology (enrichment)	phosphatidylinositol biosynthetic process	HOM05D001486

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0017056	IEA	InterPro	structural constituent of nuclear pore
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT1G14850

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005643	IEA	InterPro	nuclear pore
GO:0009506	ISO	PLAZA Integrative Orthology	plasmodesma	AT1G14850
GO:0070772	ISO	PLAZA Homology (enrichment)	PAS complex	HOM05D001486
GO:0005730	ISO	PLAZA Integrative Orthology	nucleolus	AT1G14850
GO:0005886	ISO	PLAZA Integrative Orthology	plasma membrane	AT1G14850

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR042533	Nucleoporin, Nup155-like, C-terminal, subdomain 1
IPR042538	Nucleoporin, Nup155-like, C-terminal, subdomain 3
IPR014908	Nucleoporin, Nup133/Nup155-like, N-terminal
IPR004870	Nucleoporin, Nup155-like
IPR042537	Nucleoporin, Nup155-like, C-terminal, subdomain 2

Mapman id	Description
23.5.1.1.2.3	Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).inner ring.scaffold nucleoporin (NUP155)