Gene: Zm00001eb009110
General Information
Structural Information
- Species Zea mays
- Gene Identifier Zm00001eb009110
- Transcript Identifier Zm00001eb009110_T002
- Gene Type Coding gene
- Location 1 : 28146708-28156940 : positive
Gene Family Information
- ID HOM05D001486
- #Genes/#Species 428/100
- Phylogenetic origin
- ID ORTHO05D004921
- #Genes/#Species 168/95
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Zm00001eb009110_T002
- pid Zm00001eb009110_P002
- uniprot A0A1D6JTS5
- uniprot A0A1D6JTT6
- uniprot A0A1D6JTU7
- uniprot A0A1D6JTS4
- uniprot A0A1D6JTT5
- uniprot A0A1D6JTS7
- uniprot A0A1D6JTU9
- uniprot A0A1D6PG60
- uniprot A0A1D6JTS6
- uniprot A0A1D6JTV3
- uniprot A0A1D6JTS3
- uniprot A0A1D6JTW1
- uniprot A0A1D6JTW0
- uniprot A0A1D6JTU1
- uniprot A0A1D6JTW3
- uniprot A0A317YKF7
- uniprot A0A1D6JTS9
- entrez 103632918
- refseq XP_008652862.1
- refseq XM_008654640.1
- V4_identifier Zm00001d028262
Descriptions
- Description Zm00001e000883
- Description Nuclear pore complex protein NUP155
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000972 | IBA | GOA Database | transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery | |
| GO:0006661 | ISO | PLAZA Homology (enrichment) | phosphatidylinositol biosynthetic process | HOM05D001486 |
| GO:0006913 | IEA | GOA Database | nucleocytoplasmic transport | |
| GO:0006913 | IEA | InterPro | nucleocytoplasmic transport | |
| GO:0006606 | IBA | GOA Database | protein import into nucleus | |
| GO:0006405 | IBA | GOA Database | RNA export from nucleus | |
| GO:0036228 | IBA | GOA Database | protein localization to nuclear inner membrane |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G14850 |
| GO:0017056 | IBA IEA | GOA Database | structural constituent of nuclear pore | |
| GO:0017056 | IEA | InterPro | structural constituent of nuclear pore |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT1G14850 |
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT1G14850 |
| GO:0070772 | ISO | PLAZA Homology (enrichment) | PAS complex | HOM05D001486 |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT1G14850 |
| GO:0005643 | IEA | GOA Database | nuclear pore | |
| GO:0005643 | IEA | InterPro | nuclear pore | |
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0044611 | IBA | GOA Database | nuclear pore inner ring |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR042538 | Nucleoporin, Nup155-like, C-terminal, subdomain 3 |
| IPR011044 | Quinoprotein amine dehydrogenase, beta chain-like |
| IPR042537 | Nucleoporin, Nup155-like, C-terminal, subdomain 2 |
| IPR004870 | Nucleoporin, Nup155-like |
| IPR007187 | Nucleoporin, Nup133/Nup155-like, C-terminal |
| IPR014908 | Nucleoporin, Nup133/Nup155-like, N-terminal |
| IPR042533 | Nucleoporin, Nup155-like, C-terminal, subdomain 1 |
| Mapman id | Description |
|---|---|
| 23.5.1.1.2.3 | Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).inner ring.scaffold nucleoporin (NUP155) |