Gene: Solyc07g008160.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc07g008160.3
  • Transcript Identifier Solyc07g008160.3.1
  • Gene Type Coding gene
  • Location SL4.0ch07 : 2841895-2857305 : positive

Gene Family Information

  • ID HOM05D001486
  • #Genes/#Species 428/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc07g008160.3.1
  • uniprot A0A3Q7H7U1
  • gene_id Solyc07g008160

Descriptions

  • Description nuclear pore complex protein NUP155 (AHRD V3.3 *** A0A2I4FD09_9ROSI)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006661
ISO
PLAZA Homology (enrichment)phosphatidylinositol biosynthetic process HOM05D001486
GO:0036228
IBA
GOA Databaseprotein localization to nuclear inner membrane
GO:0006405
IBA
GOA DatabaseRNA export from nucleus
GO:0006606
IBA
GOA Databaseprotein import into nucleus
GO:0000972
IBA
GOA Databasetranscription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery
GO:0006913
IEA
GOA Databasenucleocytoplasmic transport
GO:0006913
IEA
InterPronucleocytoplasmic transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0017056
IBA
IEA
GOA Databasestructural constituent of nuclear pore
GO:0017056
IEA
InterProstructural constituent of nuclear pore
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G14850

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G14850
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT1G14850
GO:0070772
ISO
PLAZA Homology (enrichment)PAS complex HOM05D001486
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT1G14850
GO:0044611
IBA
GOA Databasenuclear pore inner ring
GO:0005643
IEA
GOA Databasenuclear pore
GO:0005643
IEA
InterPronuclear pore
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR014908 Nucleoporin, Nup133/Nup155-like, N-terminal
IPR004870 Nucleoporin, Nup155-like
IPR042537 Nucleoporin, Nup155-like, C-terminal, subdomain 2
IPR042533 Nucleoporin, Nup155-like, C-terminal, subdomain 1
IPR042538 Nucleoporin, Nup155-like, C-terminal, subdomain 3
IPR007187 Nucleoporin, Nup133/Nup155-like, C-terminal
Mapman id Description
23.5.1.1.2.3 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).inner ring.scaffold nucleoporin (NUP155)