Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G1533 Trochodendron aralioides HOM05D001432 ORTHO05D415823 1.9e-58 228.8 103 100.0
TAR636G1063 Trochodendron aralioides HOM05D001432 ORTHO05D009001 1.3e-27 126.3 102 64.7
TAR383G0401 Trochodendron aralioides HOM05D001432 ORTHO05D009001 1.4e-21 106.3 53 84.9
CiPaw.02G154200 Carya illinoinensis HOM05D001432 ORTHO05D009001 1.9e-21 105.9 53 83.0
Nn8g39367 Nelumbo nucifera HOM05D001432 ORTHO05D009001 2.4e-21 105.5 53 83.0
COL.COLO4_12882 Corchorus olitorius HOM05D001432 ORTHO05D009001 5.4e-21 104.4 52 84.6
Sabra03G0034400 Salix brachista HOM05D001432 ORTHO05D009001 9.2e-21 103.6 70 68.6
GSVIVG01017239001 Vitis vinifera HOM05D001432 ORTHO05D009001 9.2e-21 103.6 53 81.1
Gohir.A06G119300 Gossypium hirsutum HOM05D001432 ORTHO05D009001 1.2e-20 103.2 53 79.2
Potri.003G060000 Populus trichocarpa HOM05D001432 ORTHO05D009001 1.2e-20 103.2 53 81.1
Gohir.D06G123500 Gossypium hirsutum HOM05D001432 ORTHO05D009001 1.6e-20 102.8 53 79.2
Gorai.010G143600 Gossypium raimondii HOM05D001432 ORTHO05D009001 1.6e-20 102.8 53 79.2
Atru.chr1.3144 Acer truncatum HOM05D001432 ORTHO05D009001 2.1e-20 102.4 53 81.1
Thecc.06G074500 Theobroma cacao HOM05D001432 ORTHO05D009001 2.7e-20 102.1 53 79.2
MBI01_g07130_MAGBIO Magnolia biondii HOM05D001432 ORTHO05D009001 3.5e-20 101.7 53 79.2
Ciclev10025319m.g Citrus clementina HOM05D001432 ORTHO05D009001 4.6e-20 101.3 53 79.2
RcHm_v2.0_Chr2g0136821 Rosa chinensis HOM05D001432 ORTHO05D009001 4.6e-20 101.3 53 77.4
CSS0039762 Camellia sinensis var. sinensis HOM05D001432 ORTHO05D009001 6.0e-20 100.9 53 81.1
FvH4_6g30470 Fragaria vesca HOM05D001432 ORTHO05D009001 6.0e-20 100.9 53 77.4
FAN14G3546 Fragaria x ananassa HOM05D001432 ORTHO05D009001 6.0e-20 100.9 53 77.4
Sopen12g022090 Solanum pennellii HOM05D001432 ORTHO05D009001 6.0e-20 100.9 76 60.5
MD17G1203600 Malus domestica HOM05D001432 ORTHO05D009001 7.8e-20 100.5 53 75.5
Peaxi162Scf00034g01311 Petunia axillaris HOM05D001432 ORTHO05D009001 1.0e-19 100.1 53 77.4
Prupe.3G078500 Prunus persica HOM05D001432 ORTHO05D009001 1.3e-19 99.8 53 73.6
Rhsim12G0193900 Rhododendron simsii HOM05D001432 ORTHO05D009001 1.3e-19 99.8 53 79.2
FAN05G1517 Fragaria x ananassa HOM05D001432 ORTHO05D009001 1.7e-19 99.4 53 75.5
Cfa002016 Carpinus fangiana HOM05D001432 ORTHO05D009001 2.3e-19 99.0 52 78.8
Eucgr.J03037 Eucalyptus grandis HOM05D001432 ORTHO05D009001 2.3e-19 99.0 52 78.8
Lsat_1_v5_gn_4_104581 Lactuca sativa HOM05D001432 ORTHO05D009001 2.3e-19 99.0 53 75.5
Manes.04G117500 Manihot esculenta HOM05D001432 ORTHO05D009001 2.3e-19 99.0 52 78.8
PGSC0003DMG400028620 Solanum tuberosum HOM05D001432 ORTHO05D009001 2.3e-19 99.0 76 59.2
CAN.G303.78 Capsicum annuum HOM05D001432 ORTHO05D009001 3.0e-19 98.6 53 75.5
Cpa.g.sc10.218 Carica papaya HOM05D001432 ORTHO05D009001 3.0e-19 98.6 53 79.2
Nitab4.5_0006854g0010 Nicotiana tabacum HOM05D001432 ORTHO05D009001 3.0e-19 98.6 53 75.5
PGR031G1163 Punica granatum HOM05D001432 ORTHO05D009001 3.0e-19 98.6 53 77.4
Aa31LG8G2830 Aethionema arabicum HOM05D001432 ORTHO05D009001 3.9e-19 98.2 53 73.6
Aqoxy7G02054 Aquilegia oxysepala HOM05D001432 ORTHO05D009001 3.9e-19 98.2 53 73.6
Duzib235G0345 Durio zibethinus HOM05D001432 ORTHO05D009001 3.9e-19 98.2 51 80.4
Glyma.08G209600 Glycine max HOM05D001432 ORTHO05D009001 3.9e-19 98.2 53 77.4
Solyc12g042910.2 Solanum lycopersicum HOM05D001432 ORTHO05D009001 3.9e-19 98.2 76 57.9
THA.LOC104818045 Tarenaya hassleriana HOM05D001432 ORTHO05D009001 3.9e-19 98.2 53 73.6
Phvul.010G153200 Phaseolus vulgaris HOM05D001432 ORTHO05D009001 5.1e-19 97.8 53 75.5
QL05p034025 Quercus lobata HOM05D001432 ORTHO05D009001 5.1e-19 97.8 52 75.0
VMungo0331G1721 Vigna mungo HOM05D001432 ORTHO05D009001 5.1e-19 97.8 53 75.5
CsaV3_7G032700 Cucumis sativus L. HOM05D001432 ORTHO05D009001 6.6e-19 97.4 53 75.5
TPR.G38677 Trifolium pratense HOM05D001432 ORTHO05D009001 6.6e-19 97.4 53 75.5
ClCG09G002630 Citrullus lanatus HOM05D001432 ORTHO05D009001 8.7e-19 97.1 53 77.4
Lj3g0019131 Lotus japonicus HOM05D001432 ORTHO05D009001 8.7e-19 97.1 53 75.5
PSO455G0239 Papaver somniferum HOM05D001432 ORTHO05D009001 8.7e-19 97.1 53 75.5
TWI12G0405 Tripterygium wilfordii HOM05D001432 ORTHO05D009001 1.1e-18 96.7 67 65.7
Nitab4.5_0003011g0090 Nicotiana tabacum HOM05D001432 ORTHO05D009001 1.5e-18 96.3 70 61.4
Psat7g254920 Pisum sativum HOM05D001432 ORTHO05D009001 1.5e-18 96.3 53 73.6
Sed0021672 Sechium edule HOM05D001432 ORTHO05D009001 1.5e-18 96.3 53 75.5
SGA_v2.0_scaffold5G02656 Striga asiatica HOM05D001432 ORTHO05D009001 1.5e-18 96.3 53 73.6
Ca_07177_v3 Cicer arietinum L. HOM05D001432 ORTHO05D009001 1.9e-18 95.9 53 73.6
HanXRQChr09g0274891 Helianthus annuus HOM05D001432 ORTHO05D009001 1.9e-18 95.9 53 69.8
PSO170G4564 Papaver somniferum HOM05D001432 ORTHO05D009001 1.9e-18 95.9 53 75.5
Cc04_g03940 Coffea canephora HOM05D001432 ORTHO05D009001 2.5e-18 95.5 53 73.6
Sc10g0005650 Simmondsia chinensis HOM05D001432 ORTHO05D009001 2.5e-18 95.5 52 73.1
TPR.G22889 Trifolium pratense HOM05D001432 ORTHO05D009001 4.3e-18 94.7 53 73.6
unitig_62.g23602 Utricularia gibba HOM05D001315 ORTHO05D001618 4.3e-18 94.7 53 71.7
CANSAT56G2537 Cannabis sativa HOM05D001432 ORTHO05D009001 5.6e-18 94.4 52 75.0
Medtr4g011370 Medicago truncatula HOM05D001432 ORTHO05D009001 5.6e-18 94.4 53 73.6
Os02g0204400 Oryza sativa ssp. japonica HOM05D001432 ORTHO05D009001 5.6e-18 94.4 53 69.8
vmacro16924 Vaccinium macrocarpon HOM05D001432 ORTHO05D009001 5.6e-18 94.4 53 73.6
AL3G28260 Arabidopsis lyrata HOM05D001432 ORTHO05D009001 7.3e-18 94.0 52 73.1
AT3G15620 Arabidopsis thaliana HOM05D001432 ORTHO05D009001 7.3e-18 94.0 52 73.1
arahy.Tifrunner.gnm1.ann1.P8UK8X Arachis hypogaea HOM05D001432 ORTHO05D009001 7.3e-18 94.0 53 71.7
CARHR090710 Cardamine hirsuta HOM05D001432 ORTHO05D009001 7.3e-18 94.0 52 73.1
Thhalv10020425m.g Eutrema salsugineum HOM05D001432 ORTHO05D009001 7.3e-18 94.0 53 69.8
arahy.Tifrunner.gnm1.ann1.NTT2QB Arachis hypogaea HOM05D001432 ORTHO05D009001 9.6e-18 93.6 52 73.1
EL10Ac9g21949 Beta vulgaris HOM05D001432 ORTHO05D009001 9.6e-18 93.6 72 59.7
Haze_16505 Corylus avellana HOM05D001432 ORTHO05D009001 1.3e-17 93.2 61 68.9
Oeu015234.1 Olea europaea HOM05D001432 ORTHO05D009001 1.3e-17 93.2 52 75.0
ATR0815G018 Amborella trichopoda HOM05D001432 ORTHO05D009001 1.6e-17 92.8 53 67.9
CDE04G0156 Ceratophyllum demersum HOM05D001432 ORTHO05D009001 1.6e-17 92.8 53 69.8
Sp3g13920 Schrenkiella parvula HOM05D001432 ORTHO05D009001 1.6e-17 92.8 53 69.8
Migut.I00806 Erythranthe guttata HOM05D001432 ORTHO05D009001 2.1e-17 92.4 53 69.8
Carub.0003s1537 Capsella rubella HOM05D001432 ORTHO05D009001 6.2e-17 90.9 52 69.2
ECA232G2422 Erigeron canadensis HOM05D001432 ORTHO05D009001 1.1e-16 90.1 53 67.9
SalBow2G3379 Salvia bowleyana HOM05D001432 ORTHO05D009001 1.4e-16 89.7 51 72.5
SEGI_39830 Sequoiadendron giganteum HOM05D001432 ORTHO05D009001 1.8e-16 89.4 53 66.0
Pp3c22_7890 Physcomitrium patens HOM05D001432 ORTHO05D009001 6.9e-16 87.4 53 66.0
BcaB04g20913 Brassica carinata HOM05D001432 ORTHO05D009001 1.2e-15 86.7 52 67.3
BcaC09g48531 Brassica carinata HOM05D001432 ORTHO05D009001 1.2e-15 86.7 52 67.3
A01p38460 Brassica napus HOM05D001432 ORTHO05D009001 1.2e-15 86.7 52 67.3
C01p48790 Brassica napus HOM05D001432 ORTHO05D009001 1.2e-15 86.7 52 67.3
BolC1t04834H Brassica oleracea HOM05D001432 ORTHO05D009001 1.2e-15 86.7 52 67.3
BraA01t03896Z Brassica rapa HOM05D001432 ORTHO05D009001 1.5e-15 86.3 52 67.3
HPP92_008657 Vanilla planifolia HOM05D001432 ORTHO05D009001 2.0e-15 85.9 53 60.4
SMO169G0266 Selaginella moellendorffii HOM05D001432 ORTHO05D009001 7.6e-15 84.0 53 66.0
CBR_g30582 Chara braunii HOM05D000019 ORTHO05D000002 9.9e-15 83.6 53 62.3
AagrBONN_evm.TU.Sc2ySwM_362.2051 Anthoceros agrestis HOM05D001432 ORTHO05D009001 6.4e-14 80.9 53 60.4
Actinidia08815 Actinidia chinensis HOM05D001432 ORTHO05D009001 1.6e-12 76.3 40 77.5
Mapoly0095s0027 Marchantia polymorpha HOM05D001432 ORTHO05D009001 1.6e-12 76.3 70 45.7
MCO04G063 Micromonas commoda HOM05D001432 ORTHO05D009001 2.1e-12 75.9 48 58.3
Cre06.g278251 Chlamydomonas reinhardtii HOM05D001432 ORTHO05D009001 6.0e-12 74.3 52 59.6
PRCOL_00000313 Prasinoderma coloniale HOM05D001432 ORTHO05D009001 4.8e-09 64.7 44 56.8
MELO3C023394.2 Cucumis melo HOM05D001432 ORTHO05D009001 1.8e-08 62.8 35 74.3
Actinidia16000 Actinidia chinensis HOM05D001262 ORTHO05D009001 1.5e-07 59.7 29 82.8


User provided reference genes

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