Gene: AT3G15620

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G15620
  • Transcript Identifier AT3G15620.1
  • Gene Type Coding gene
  • Location Chr3 : 5293475-5296548 : negative

Gene Family Information

  • ID HOM05D001432
  • #Genes/#Species 439/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G15620.1
  • symbol UVR3
  • full_name UV REPAIR DEFECTIVE 3
  • uniprot O48652

Descriptions

  • Description DNA photolyase family protein
  • Computational description UV REPAIR DEFECTIVE 3 (UVR3); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), DNA photolyase, N-terminal (InterPro:IPR006050), DNA photolyase, FAD-binding/Cryptochrome, C-terminal (InterPro:IPR005101); BEST Arabidopsis thaliana protein match is: cryptochrome 2 (TAIR:AT1G04400.1); Has 8860 Blast hits to 8829 proteins in 1491 species: Archae - 102; Bacteria - 3068; Metazoa - 397; Fungi - 149; Plants - 721; Viruses - 0; Other Eukaryotes - 4423 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009785
ISO
PLAZA Homology (enrichment)blue light signaling pathway HOM05D001432
GO:0006974
IEA
GOA Databasecellular response to DNA damage stimulus
GO:0006281
IEA
GOA DatabaseDNA repair
GO:0043153
IBA
Gene Ontologyentrainment of circadian clock by photoperiod1
GO:0032922
IBA
Gene Ontologycircadian regulation of gene expression1
GO:0009411
IMP
Gene Ontologyresponse to UV2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009882
ISO
PLAZA Homology (enrichment)blue light photoreceptor activity HOM05D001432
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IBA
Gene OntologyDNA binding1
GO:0016829
IEA
GOA Databaselyase activity
GO:0003914
IEA
GOA DatabaseDNA (6-4) photolyase activity
GO:0003914
IDA
ISS
Gene OntologyDNA (6-4) photolyase activity3
GO:0071949
IBA
Gene OntologyFAD binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
Gene Ontologynucleus1
GO:0009507
ISM
Gene Ontologychloroplast
GO:0005737
IBA
Gene Ontologycytoplasm1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily
IPR006050 DNA photolyase, N-terminal
IPR002081 Cryptochrome/DNA photolyase class 1
IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily
IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain
IPR014729 Rossmann-like alpha/beta/alpha sandwich fold
Mapman id Description
14.9.1 DNA damage response.photoreactivation.6-4-type photolyase (UVR3)