Gene: Cc04_g03940
General Information
Structural Information
- Species Coffea canephora
- Gene Identifier Cc04_g03940
- Transcript Identifier Cc04_g03940.1
- Gene Type Coding gene
- Location chr4 : 2993271-2998053 : positive
Gene Family Information
- ID HOM05D001432
- #Genes/#Species 439/99
- Phylogenetic origin
- ID ORTHO05D009001
- #Genes/#Species 111/92
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- UniProtKB O48652
- UniProtKB E6NUD8
- UniProtKB D7U0W1
- UniProtKB B9RV05
- UniProtKB Q0E2Y1
- UniProtKB Q6ZZY0
- id GSCOCG00022110001
Descriptions
- Description (6-4)DNA photolyase
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009411 | ISO | PLAZA Integrative Orthology | response to UV | AT3G15620 |
| GO:0009785 | ISO | PLAZA Homology (enrichment) | blue light signaling pathway | HOM05D001432 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009882 | ISO | PLAZA Homology (enrichment) | blue light photoreceptor activity | HOM05D001432 |
| GO:0003914 | ISO | PLAZA Integrative Orthology | DNA (6-4) photolyase activity | AT3G15620 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR002081 | Cryptochrome/DNA photolyase class 1 |
| IPR036155 | Cryptochrome/photolyase, N-terminal domain superfamily |
| IPR014729 | Rossmann-like alpha/beta/alpha sandwich fold |
| IPR005101 | Cryptochrome/DNA photolyase, FAD-binding domain |
| IPR036134 | Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily |
| IPR006050 | DNA photolyase, N-terminal |
| Mapman id | Description |
|---|---|
| 14.9.1 | DNA damage response.photoreactivation.6-4-type photolyase (UVR3) |