Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR628G1516 Trochodendron aralioides HOM05D006779 ORTHO05D008491 1.4e-53 213.0 134 100.0
CiPaw.05G054000 Carya illinoinensis HOM05D006779 ORTHO05D008491 2.1e-20 102.8 121 52.9
QL11p037315 Quercus lobata HOM05D006779 ORTHO05D008491 6.0e-20 101.3 120 53.3
Haze_01903 Corylus avellana HOM05D006779 ORTHO05D008491 7.8e-20 100.9 120 50.8
MBI02_g21199_MAGBIO Magnolia biondii HOM05D006779 ORTHO05D008491 1.0e-19 100.5 130 53.1
GSVIVG01031784001 Vitis vinifera HOM05D006779 ORTHO05D008491 3.9e-19 98.6 121 52.1
Prupe.8G119200 Prunus persica HOM05D006779 ORTHO05D008491 5.1e-19 98.2 120 50.8
Nn5g30192 Nelumbo nucifera HOM05D006779 ORTHO05D008491 1.9e-18 96.3 123 52.8
RcHm_v2.0_Chr6g0258731 Rosa chinensis HOM05D006779 ORTHO05D008491 1.9e-18 96.3 120 47.5
MD05G1075500 Malus domestica HOM05D006779 ORTHO05D008491 5.6e-18 94.7 120 50.0
Gohir.A03G191700 Gossypium hirsutum HOM05D006779 ORTHO05D008491 9.5e-18 94.0 120 49.2
Gohir.D02G212600 Gossypium hirsutum HOM05D006779 ORTHO05D008491 1.6e-17 93.2 120 49.2
Gorai.005G240600 Gossypium raimondii HOM05D006779 ORTHO05D008491 1.6e-17 93.2 120 49.2
CsaV3_7G008730 Cucumis sativus L. HOM05D006779 ORTHO05D008491 4.7e-17 91.7 120 52.5
Dinv23582 Davidia involucrata HOM05D006779 ORTHO05D008491 4.7e-17 91.7 120 50.8
Manes.15G142500 Manihot esculenta HOM05D006779 ORTHO05D008491 1.1e-16 90.5 120 50.8
Sabra09G0080600 Salix brachista HOM05D006779 ORTHO05D008491 1.1e-16 90.5 120 50.0
Sed0011670 Sechium edule HOM05D006779 ORTHO05D008491 1.8e-16 89.7 120 50.0
TWI79G0004 Tripterygium wilfordii HOM05D006779 ORTHO05D008491 1.8e-16 89.7 121 48.8
Cc02_g18560 Coffea canephora HOM05D006779 ORTHO05D008491 2.3e-16 89.4 120 45.8
MELO3C018438.2 Cucumis melo HOM05D006779 ORTHO05D008491 2.3e-16 89.4 120 51.7
ClCG02G005780 Citrullus lanatus HOM05D006779 ORTHO05D008491 3.1e-16 89.0 120 50.8
FAN24G0787 Fragaria x ananassa HOM05D006779 ORTHO05D008491 3.1e-16 89.0 121 45.5
Potri.009G105500 Populus trichocarpa HOM05D006779 ORTHO05D008491 3.1e-16 89.0 120 49.2
PGR142G0644 Punica granatum HOM05D006779 ORTHO05D008491 3.1e-16 89.0 121 47.9
FvH4_2g06680 Fragaria vesca HOM05D006779 ORTHO05D008491 5.2e-16 88.2 121 45.5
MSTRG.16763 Avicennia marina HOM05D006779 ORTHO05D008491 6.8e-16 87.8 120 48.3
CANSAT25G0176 Cannabis sativa HOM05D006779 ORTHO05D008491 6.8e-16 87.8 120 48.3
FAN15G3147 Fragaria x ananassa HOM05D006779 ORTHO05D008491 8.9e-16 87.4 120 45.8
FAN20G1913 Fragaria x ananassa HOM05D006779 ORTHO05D008491 8.9e-16 87.4 120 45.8
FAN20G2937 Fragaria x ananassa HOM05D006779 ORTHO05D008491 8.9e-16 87.4 120 45.8
Dinv42131 Davidia involucrata HOM05D006779 ORTHO05D008491 2.0e-15 86.3 120 47.5
Aqoxy6G01411 Aquilegia oxysepala HOM05D006779 ORTHO05D008491 3.4e-15 85.5 123 46.3
COL.COLO4_32686 Corchorus olitorius HOM05D006779 ORTHO05D008491 4.4e-15 85.1 119 47.9
TWI31G0027 Tripterygium wilfordii HOM05D006779 ORTHO05D008491 4.4e-15 85.1 121 47.1
CSS0011815 Camellia sinensis var. sinensis HOM05D000591 ORTHO05D000579 9.9e-15 84.0 120 47.5
Sc18g0004890 Simmondsia chinensis HOM05D006779 ORTHO05D008491 9.9e-15 84.0 119 47.9
Thecc.02G097400 Theobroma cacao HOM05D006779 ORTHO05D008491 9.9e-15 84.0 119 47.9
EL10Ac3g06870 Beta vulgaris HOM05D006779 ORTHO05D008491 1.7e-14 83.2 122 47.5
Oeu064516.1 Olea europaea HOM05D006779 ORTHO05D008491 1.7e-14 83.2 120 47.5
Hund00325 Selenicereus undatus HOM05D006779 ORTHO05D008491 2.9e-14 82.4 119 47.9
Migut.B00314 Erythranthe guttata HOM05D006779 ORTHO05D008491 3.2e-13 79.0 122 49.2
SalBow6G0615 Salvia bowleyana HOM05D006779 ORTHO05D008491 4.1e-13 78.6 120 45.0
Ah.04g152710 Amaranthus hybridus HOM05D006779 ORTHO05D008491 2.1e-12 76.3 122 45.1
Rhsim11G0168500 Rhododendron simsii HOM05D006779 ORTHO05D008491 2.1e-12 76.3 121 43.0
vmacro02181 Vaccinium macrocarpon HOM05D006779 ORTHO05D008491 2.1e-12 76.3 121 43.0
Actinidia00459 Actinidia chinensis HOM05D006779 ORTHO05D008491 7.8e-12 74.3 120 43.3
PSO541G4058 Papaver somniferum HOM05D006779 ORTHO05D008491 1.0e-11 73.9 123 58.5
AUR62022456 Chenopodium quinoa HOM05D006779 ORTHO05D008491 1.3e-11 73.6 121 43.8
Solyc01g108430.3 Solanum lycopersicum HOM05D006779 ORTHO05D008491 1.3e-11 73.6 120 41.7
Eucgr.I01169 Eucalyptus grandis HOM05D006779 ORTHO05D008491 1.7e-11 73.2 119 45.4
Sopen01g050660 Solanum pennellii HOM05D006779 ORTHO05D008491 1.7e-11 73.2 120 41.7
PGSC0003DMG400025811 Solanum tuberosum HOM05D006779 ORTHO05D008491 1.7e-11 73.2 120 41.7
Ciclev10029963m.g Citrus clementina HOM05D006779 ORTHO05D008491 3.0e-11 72.4 124 41.9
Nitab4.5_0004334g0110 Nicotiana tabacum HOM05D006779 ORTHO05D008491 3.9e-11 72.0 120 41.7
AT1G49590 Arabidopsis thaliana HOM05D006779 ORTHO05D008491 6.6e-11 71.2 120 43.3
Nitab4.5_0005583g0020 Nicotiana tabacum HOM05D006779 ORTHO05D008491 6.6e-11 71.2 120 42.5
SGA_v2.0_scaffold90G27693 Striga asiatica HOM05D006779 ORTHO05D008491 8.6e-11 70.9 120 45.0
Glyma.01G146900 Glycine max HOM05D006779 ORTHO05D008491 1.5e-10 70.1 119 44.5
Glyma.10G112900 Glycine max HOM05D006779 ORTHO05D008491 1.5e-10 70.1 119 44.5
Lalb_Chr09g0328181 Lupinus albus HOM05D006779 ORTHO05D008491 1.5e-10 70.1 118 45.8
PSO675G5018 Papaver somniferum HOM05D006779 ORTHO05D008491 1.5e-10 70.1 123 57.7
Ca_18655_v3 Cicer arietinum L. HOM05D006779 ORTHO05D008491 1.9e-10 69.7 119 42.0
unitig_60.g25783 Utricularia gibba HOM05D006779 ORTHO05D008491 5.6e-10 68.2 120 42.5
HPP92_004257 Vanilla planifolia HOM05D006779 ORTHO05D008491 7.3e-10 67.8 123 43.1
AL1G56960 Arabidopsis lyrata HOM05D006779 ORTHO05D008491 9.6e-10 67.4 120 41.7
AUR62034187 Chenopodium quinoa HOM05D006779 ORTHO05D008491 9.6e-10 67.4 121 41.3
SGA_v2.0_scaffold90G27688 Striga asiatica HOM05D006779 ORTHO05D008491 9.6e-10 67.4 120 44.2
CDE06G1966 Ceratophyllum demersum HOM05D006779 ORTHO05D008491 2.1e-09 66.2 97 48.5
Sp1g36470 Schrenkiella parvula HOM05D006779 ORTHO05D008491 2.1e-09 66.2 120 40.8
CAN.G322.16 Capsicum annuum HOM05D006779 ORTHO05D008491 4.7e-09 65.1 120 40.8
CDE03G0027 Ceratophyllum demersum HOM05D006779 ORTHO05D008491 4.7e-09 65.1 97 47.4
Carub.0001s3879 Capsella rubella HOM05D006779 ORTHO05D008491 6.2e-09 64.7 120 40.0
Glyma.02G159500 Glycine max HOM05D006779 ORTHO05D008491 1.1e-08 63.9 119 41.2
DCAR_029018 Daucus carota HOM05D000144 ORTHO05D003364 2.4e-08 62.8 121 38.8
Thhalv10011741m.g Eutrema salsugineum HOM05D006779 ORTHO05D008491 2.4e-08 62.8 120 40.8
CSS0024784 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 4.0e-08 62.0 81 49.4
Atru.chr5.2773 Acer truncatum HOM05D006779 ORTHO05D008491 5.2e-08 61.6 124 40.3
arahy.Tifrunner.gnm1.ann1.8ZG09Z Arachis hypogaea HOM05D006779 ORTHO05D008491 5.2e-08 61.6 123 39.8
CARHR039640 Cardamine hirsuta HOM05D006779 ORTHO05D008491 5.2e-08 61.6 120 39.2
HPP92_004235 Vanilla planifolia HOM05D006779 ORTHO05D008491 5.2e-08 61.6 122 41.8
Phvul.007G247000 Phaseolus vulgaris HOM05D006779 ORTHO05D008491 8.9e-08 60.8 119 38.7
Medtr4g086640 Medicago truncatula HOM05D006779 ORTHO05D008491 1.2e-07 60.5 119 37.8
Aa31LG10G4420 Aethionema arabicum HOM05D006779 ORTHO05D008491 1.5e-07 60.1 119 40.3
BolC6t35591H Brassica oleracea HOM05D006779 ORTHO05D008491 1.5e-07 60.1 121 38.0
Zm00001eb373090 Zea mays HOM05D006779 ORTHO05D008491 2.0e-07 59.7 75 48.0
C06p04620 Brassica napus HOM05D006779 ORTHO05D008491 2.6e-07 59.3 121 37.2
BraA06t23562Z Brassica rapa HOM05D006779 ORTHO05D008491 3.4e-07 58.9 122 37.7
arahy.Tifrunner.gnm1.ann1.T066AP Arachis hypogaea HOM05D006779 ORTHO05D008491 4.4e-07 58.5 120 39.2
Psat7g121840 Pisum sativum HOM05D006779 ORTHO05D008491 4.4e-07 58.5 122 41.0
CSS0021002 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 1.3e-06 57.0 81 48.1
Lj4g0006122 Lotus japonicus HOM05D006779 ORTHO05D008491 1.3e-06 57.0 119 41.2
A06p03540 Brassica napus HOM05D006779 ORTHO05D008491 2.9e-06 55.8 121 37.2
Lj5C207T4 Lonicera japonica HOM05D006779 ORTHO05D008491 2.9e-06 55.8 120 35.8
TPR.G23531 Trifolium pratense HOM05D006779 ORTHO05D008491 6.4e-06 54.7 119 36.1


User provided reference genes

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