Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR365G0890 Trochodendron aralioides HOM05D000104 ORTHO05D005604 0.0e+00 1855.5 1015 100.0
TAR365G0556 Trochodendron aralioides HOM05D000104 ORTHO05D005604 4.6e-282 974.9 979 58.9
TAR362G0998 Trochodendron aralioides HOM05D000104 ORTHO05D005604 2.0e-248 863.2 1006 52.6
Nn3g21275 Nelumbo nucifera HOM05D000104 ORTHO05D005604 6.9e-193 678.7 1020 44.6
TAR365G0129 Trochodendron aralioides HOM05D000104 ORTHO05D005604 8.4e-191 671.8 584 71.9
Dinv08033 Davidia involucrata HOM05D000104 ORTHO05D005604 8.2e-138 495.7 983 37.2
PSO801G0783 Papaver somniferum HOM05D000104 ORTHO05D005604 7.3e-110 402.9 990 34.5
PSO339G1276 Papaver somniferum HOM05D000104 ORTHO05D005604 3.6e-109 400.6 985 34.4
Aqoxy5G00624 Aquilegia oxysepala HOM05D000104 ORTHO05D005604 3.7e-106 390.6 1030 33.7
Cfa015506 Carpinus fangiana HOM05D000104 ORTHO05D005604 3.2e-97 360.9 893 33.1
Haze_01047 Corylus avellana HOM05D000104 ORTHO05D005604 4.6e-96 357.1 986 32.2
GSVIVG01017820001 Vitis vinifera HOM05D000104 ORTHO05D005604 1.7e-95 355.1 988 30.8
Actinidia16312 Actinidia chinensis HOM05D000104 ORTHO05D005604 6.6e-95 353.2 959 33.4
Duzib151G0282 Durio zibethinus HOM05D000104 ORTHO05D005604 2.8e-93 347.8 906 33.1
Prupe.1G143200 Prunus persica HOM05D000104 ORTHO05D005604 2.2e-90 338.2 826 32.9
Thecc.04G275900 Theobroma cacao HOM05D000104 ORTHO05D005604 4.1e-89 334.0 898 32.4
Atru.chr3.1960 Acer truncatum HOM05D000104 ORTHO05D005604 1.5e-86 325.5 918 31.8
QL06p007127 Quercus lobata HOM05D000104 ORTHO05D005604 3.3e-86 324.3 981 30.5
COL.COLO4_25219 Corchorus olitorius HOM05D000104 ORTHO05D005604 1.5e-83 315.5 824 33.4
Gorai.011G185100 Gossypium raimondii HOM05D000104 ORTHO05D005604 4.4e-83 313.9 824 34.0
Potri.010G019150 Populus trichocarpa HOM05D000104 ORTHO05D005604 7.6e-83 313.2 900 29.8
Potri.008G195900 Populus trichocarpa HOM05D000104 ORTHO05D005604 1.3e-82 312.4 918 30.1
Duzib212G0880 Durio zibethinus HOM05D000104 ORTHO05D005604 1.2e-80 305.8 877 32.4
CANSAT78G1941 Cannabis sativa HOM05D000104 ORTHO05D005604 1.7e-79 302.0 879 30.3
Gohir.D10G165750 Gossypium hirsutum HOM05D000104 ORTHO05D005604 6.6e-79 300.1 824 33.6
MD13G1174700 Malus domestica HOM05D000104 ORTHO05D005604 8.7e-79 299.7 910 30.2
MD16G1176400 Malus domestica HOM05D000104 ORTHO05D005604 6.9e-76 290.0 907 30.4
Gohir.A10G101880 Gossypium hirsutum HOM05D000104 ORTHO05D005604 2.0e-75 288.5 824 32.8
Sabra08G0149100 Salix brachista HOM05D000104 ORTHO05D005604 1.3e-74 285.8 920 29.6
Gohir.D09G234100 Gossypium hirsutum HOM05D000104 ORTHO05D005604 8.4e-74 283.1 783 32.4
FAN17G1482 Fragaria x ananassa HOM05D000104 ORTHO05D005604 2.7e-72 278.1 973 28.6
RcHm_v2.0_Chr4g0420741 Rosa chinensis HOM05D000104 ORTHO05D005604 1.3e-71 275.8 971 28.6
FAN22G0992 Fragaria x ananassa HOM05D000104 ORTHO05D005604 5.1e-71 273.9 974 28.9
Gorai.006G257000 Gossypium raimondii HOM05D000104 ORTHO05D005604 2.5e-70 271.6 783 31.7
Manes.15G017800 Manihot esculenta HOM05D000104 ORTHO05D005604 5.6e-70 270.4 924 30.2
FAN07G2961 Fragaria x ananassa HOM05D000104 ORTHO05D005604 2.8e-69 268.1 971 28.8
Dinv36279 Davidia involucrata HOM05D000104 ORTHO05D005604 8.4e-66 256.5 315 48.6
FvH4_4g17030 Fragaria vesca HOM05D000104 ORTHO05D005604 3.2e-65 254.6 973 28.1
vmacro04191 Vaccinium macrocarpon HOM05D000104 ORTHO05D005604 3.2e-65 254.6 919 28.5
DCAR_013049 Daucus carota HOM05D000104 ORTHO05D005604 8.7e-63 246.5 958 27.9
Glyma.17G022300 Glycine max HOM05D000104 ORTHO05D005604 1.8e-60 238.8 942 28.0
Rhsim13G0223800 Rhododendron simsii HOM05D000104 ORTHO05D005604 2.4e-60 238.4 905 28.0
HPP92_007983 Vanilla planifolia HOM05D002012 ORTHO05D001992 2.4e-60 238.4 981 26.8
Dinv36280 Davidia involucrata HOM05D000104 ORTHO05D005604 2.0e-59 235.3 373 42.4
Glyma.07G252100 Glycine max HOM05D000104 ORTHO05D005604 2.9e-58 231.5 946 27.3
Ca_21553_v3 Cicer arietinum L. HOM05D000104 ORTHO05D005604 6.5e-58 230.3 811 28.7
FAN12G1949 Fragaria x ananassa HOM05D000104 ORTHO05D005604 1.4e-57 229.2 951 27.0
TAR365G0692 Trochodendron aralioides HOM05D000104 ORTHO05D005604 2.3e-55 221.9 152 77.6
Phvul.003G100200 Phaseolus vulgaris HOM05D000104 ORTHO05D005604 6.3e-53 213.8 948 26.6
Psat4g029520 Pisum sativum HOM05D000104 ORTHO05D005604 8.2e-53 213.4 815 28.0
Gohir.A09G233050 Gossypium hirsutum HOM05D000104 ORTHO05D005604 1.1e-52 213.0 624 31.9
Lj1A357G13 Lonicera japonica HOM05D000104 ORTHO05D005604 2.2e-50 205.3 750 29.6
Ciclev10004115m.g Citrus clementina HOM05D000104 ORTHO05D005604 9.7e-46 189.9 417 37.6
Lj1C354G8 Lonicera japonica HOM05D000104 ORTHO05D005604 1.3e-45 189.5 849 28.5
TWI53G1887 Tripterygium wilfordii HOM05D000104 ORTHO05D005604 3.1e-44 184.9 418 34.7
ATR1101G061 Amborella trichopoda HOM05D000104 ORTHO05D005604 9.1e-44 183.3 1031 27.3
CiPaw.02G087300 Carya illinoinensis HOM05D000104 ORTHO05D005604 9.1e-44 183.3 901 25.4
MBI19_g34717_MAGBIO Magnolia biondii HOM05D000104 ORTHO05D005604 2.0e-43 182.2 1000 25.5
Medtr4g118720 Medicago truncatula HOM05D000104 ORTHO05D005604 2.6e-43 181.8 755 27.0
CSS0020473 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D005604 1.9e-41 175.6 462 34.0
arahy.Tifrunner.gnm1.ann1.Z03QFY Arachis hypogaea HOM05D000104 ORTHO05D005604 9.4e-41 173.3 867 26.9
arahy.Tifrunner.gnm1.ann1.S83KV6 Arachis hypogaea HOM05D000104 ORTHO05D005604 2.2e-37 162.2 934 26.4
TAR365G1084 Trochodendron aralioides HOM05D000104 ORTHO05D005604 2.8e-37 161.8 87 94.3
Lj4g0028061 Lotus japonicus HOM05D000104 ORTHO05D005604 1.8e-36 159.1 812 25.1
arahy.Tifrunner.gnm1.ann1.Q30CKZ Arachis hypogaea HOM05D000104 ORTHO05D005604 3.4e-35 154.8 947 26.3
Lj6g0025055 Lotus japonicus HOM05D000104 ORTHO05D005604 1.4e-33 149.4 861 23.9
Cpa.g.sc16.100 Carica papaya HOM05D000104 ORTHO05D005604 5.5e-33 147.5 353 34.8
arahy.Tifrunner.gnm1.ann1.N8S0IJ Arachis hypogaea HOM05D000104 ORTHO05D005604 9.4e-33 146.7 947 25.7
Zm00001eb280740 Zea mays HOM05D000104 ORTHO05D005604 2.7e-32 145.2 818 25.2
Actinidia06887 Actinidia chinensis HOM05D000738 ORTHO05D000675 3.6e-32 144.8 442 29.9
Cc00_g10730 Coffea canephora HOM05D000104 ORTHO05D005604 5.7e-30 137.5 521 29.8
TPR.G14962 Trifolium pratense HOM05D000104 ORTHO05D005604 7.4e-30 137.1 755 24.8
Lalb_Chr12g0196421 Lupinus albus HOM05D000104 ORTHO05D005604 5.3e-28 131.0 811 24.4
Cpa.g.sc16.94 Carica papaya HOM05D000104 ORTHO05D005604 7.0e-28 130.6 390 30.0
ClCG05G005740 Citrullus lanatus HOM05D000104 ORTHO05D005604 5.9e-27 127.5 909 24.8
Nitab4.5_0006542g0020 Nicotiana tabacum HOM05D000104 ORTHO05D005604 1.0e-26 126.7 550 26.9
MELO3C006601.2 Cucumis melo HOM05D000104 ORTHO05D005604 3.8e-26 124.8 970 24.0
Cpa.g.sc16.103 Carica papaya HOM05D000104 ORTHO05D005604 6.5e-26 124.0 198 41.4
Solyc11g062010.3 Solanum lycopersicum HOM05D000104 ORTHO05D005604 8.5e-26 123.6 407 31.9
CsaV3_3G014070 Cucumis sativus L. HOM05D000104 ORTHO05D005604 1.1e-25 123.2 981 24.5
Sopen11g023970 Solanum pennellii HOM05D000104 ORTHO05D005604 2.5e-25 122.1 407 31.7
Lalb_Chr13g0303901 Lupinus albus HOM05D000104 ORTHO05D005604 1.6e-24 119.4 944 23.8
TPR.G14955 Trifolium pratense HOM05D029028 ORTHO05D030699 2.1e-24 119.0 323 32.5
PGR042G2589 Punica granatum HOM05D000104 ORTHO05D005604 1.4e-23 116.3 265 35.1
Nitab4.5_0000492g0040 Nicotiana tabacum HOM05D000104 ORTHO05D005604 8.8e-23 113.6 1001 23.1
Sed0001718 Sechium edule HOM05D000104 ORTHO05D005604 1.2e-22 113.2 542 28.2
Peaxi162Scf00029g00307 Petunia axillaris HOM05D000104 ORTHO05D005604 1.3e-21 109.8 181 39.8
AUR62042660 Chenopodium quinoa HOM05D000104 ORTHO05D005604 2.2e-21 109.0 311 33.4
Lsat_1_v5_gn_8_137440 Lactuca sativa HOM05D000104 ORTHO05D005604 2.2e-21 109.0 134 48.5
arahy.Tifrunner.gnm1.ann1.Z04G07 Arachis hypogaea HOM05D000104 ORTHO05D005604 2.8e-21 108.6 393 27.7
CAN.G71.7 Capsicum annuum HOM05D000104 ORTHO05D005604 1.1e-20 106.7 398 28.4
Os06g0255200 Oryza sativa ssp. japonica HOM05D000104 ORTHO05D005604 1.4e-20 106.3 343 30.0
Migut.D00580 Erythranthe guttata HOM05D000104 ORTHO05D005604 2.4e-20 105.5 372 30.4
AUR62040388 Chenopodium quinoa HOM05D000104 ORTHO05D005604 2.0e-19 102.4 311 33.4
ECA233G1169 Erigeron canadensis HOM05D000104 ORTHO05D005604 2.0e-19 102.4 134 48.5
SGA_v2.0_scaffold8G04607 Striga asiatica HOM05D000104 ORTHO05D005604 2.7e-19 102.1 276 31.9
HanXRQChr17g0554821 Helianthus annuus HOM05D000104 ORTHO05D005604 4.5e-19 101.3 255 32.9
Oeu050209.1 Olea europaea HOM05D000104 ORTHO05D005604 7.7e-19 100.5 191 40.8
BolC3t14976H Brassica oleracea HOM05D000104 ORTHO05D005604 2.9e-18 98.6 180 39.4
THA.LOC104802562 Tarenaya hassleriana HOM05D000104 ORTHO05D005604 2.9e-18 98.6 341 29.3
A03p21840 Brassica napus HOM05D000104 ORTHO05D005604 3.8e-18 98.2 164 42.1
C03p25910 Brassica napus HOM05D000104 ORTHO05D005604 3.8e-18 98.2 180 39.4
BraA03t11420Z Brassica rapa HOM05D000104 ORTHO05D005604 3.8e-18 98.2 162 41.4
arahy.Tifrunner.gnm1.ann1.Q10S7I Arachis hypogaea HOM05D000104 ORTHO05D005604 6.5e-18 97.4 380 26.8
THA.LOC104820235 Tarenaya hassleriana HOM05D000104 ORTHO05D005604 1.9e-17 95.9 228 36.4
Aa31LG5G20580 Aethionema arabicum HOM05D000104 ORTHO05D005604 3.2e-17 95.1 175 38.9
arahy.Tifrunner.gnm1.ann1.0XZV5D Arachis hypogaea HOM05D000846 ORTHO05D001340 5.5e-17 94.4 205 36.6
EL10Ac3g06521 Beta vulgaris HOM05D000104 ORTHO05D005604 7.2e-17 94.0 433 27.0
Hma1.2p1_3230F.1_g334250 Hydrangea macrophylla HOM05D000104 ORTHO05D005604 7.2e-17 94.0 252 31.3
Sp4g21400 Schrenkiella parvula HOM05D000104 ORTHO05D005604 2.1e-16 92.4 378 28.8
Thhalv10016121m.g Eutrema salsugineum HOM05D000104 ORTHO05D005604 3.6e-16 91.7 188 37.2
SHI37476 Sapria himalayana HOM05D005377 ORTHO05D005604 6.1e-16 90.9 127 40.2
Ah.04g153970 Amaranthus hybridus HOM05D000104 ORTHO05D005604 1.8e-12 79.3 309 28.8
CDE05G2634 Ceratophyllum demersum HOM05D000104 ORTHO05D005604 3.5e-11 75.1 498 24.7
SEGI_16038 Sequoiadendron giganteum HOM05D000104 ORTHO05D005604 1.3e-10 73.2 275 27.6
AL4G21810 Arabidopsis lyrata HOM05D000104 ORTHO05D005604 6.5e-10 70.9 123 41.5
CARHR121200 Cardamine hirsuta HOM05D000104 ORTHO05D005604 1.1e-09 70.1 192 33.9
BcaB01g03644 Brassica carinata HOM05D000104 ORTHO05D005604 1.5e-09 69.7 204 32.8
Cfa015504 Carpinus fangiana HOM05D000104 ORTHO05D005604 1.5e-09 69.7 90 51.1
Ah.13g074440 Amaranthus hybridus HOM05D000404 ORTHO05D005791 9.5e-09 67.0 203 30.5
AT2G28290 Arabidopsis thaliana HOM05D000104 ORTHO05D005604 2.8e-08 65.5 196 33.7
AagrBONN_evm.TU.Sc2ySwM_368.1449 Anthoceros agrestis HOM05D000104 ORTHO05D005604 2.3e-07 62.4 162 32.1
Cc00_g33690 Coffea canephora HOM05D000104 ORTHO05D005604 4.0e-07 61.6 59 54.2
TPR.G14627 Trifolium pratense HOM05D000319 ORTHO05D000903 6.8e-07 60.8 145 31.7


User provided reference genes

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