Gene: Zm00001eb280740
General Information
Structural Information
- Species Zea mays
- Gene Identifier Zm00001eb280740
- Transcript Identifier Zm00001eb280740_T001
- Gene Type Coding gene
- Location 6 : 129152558-129200785 : positive
Gene Family Information
- ID HOM05D000104
- #Genes/#Species 3097/100
- Phylogenetic origin
- ID ORTHO05D005604
- #Genes/#Species 155/90
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Zm00001eb280740_T001
- pid Zm00001eb280740_P001
- uniprot A0A1D6LWT6
- uniprot A0A1D6LWU8
- uniprot A0A1D6LWT7
- uniprot A0A1D6LWT4
- uniprot A0A1D6LWU5
- uniprot A0A1D6LWT5
- uniprot A0A1D6LWU6
- uniprot A0A1D6LWV7
- uniprot A0A1D6LWU3
- uniprot A0A1D6LWT2
- uniprot A0A1D6LWT3
- uniprot A0A1D6LWU4
- uniprot A0A1D6LWU1
- uniprot A0A1D6LWT0
- uniprot A0A1D6LWV3
- uniprot A0A1D6LWV0
- uniprot A0A1D6LWV1
- uniprot A0A1D6LWU0
- uniprot A0A3L6EED4
- uniprot A0A3L6EGK4
- uniprot A0A1D6LWU9
- uniprot A0A1D6LWT8
- uniprot A0A1D6LWT9
- V4_identifier Zm00001d037346
Descriptions
- Description Zm00001e030969
- Description Chromatin structure-remodeling complex protein SYD
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0040029 | ISO | PLAZA Integrative Orthology | regulation of gene expression, epigenetic | AT2G28290 |
GO:0010199 | ISO | PLAZA Integrative Orthology | organ boundary specification between lateral organs and the meristem | AT2G28290 |
GO:2000022 | ISO | PLAZA Integrative Orthology | regulation of jasmonic acid mediated signaling pathway | AT2G28290 |
GO:0010104 | ISO | PLAZA Integrative Orthology | regulation of ethylene-activated signaling pathway | AT2G28290 |
GO:0009611 | ISO | PLAZA Integrative Orthology | response to wounding | AT2G28290 |
GO:0009908 | ISO | PLAZA Integrative Orthology | flower development | AT2G28290 |
GO:1900150 | ISO | PLAZA Integrative Orthology | regulation of defense response to fungus | AT2G28290 |
GO:0045944 | IBA | GOA Database | positive regulation of transcription by RNA polymerase II | |
GO:0043044 | IBA | GOA Database | ATP-dependent chromatin remodeling |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0042393 | IEA | GOA Database | histone binding | |
GO:0042393 | IEA | InterPro | histone binding | |
GO:0003682 | ISO | PLAZA Integrative Orthology | chromatin binding | AT2G28290 |
GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G28290 |
GO:0070615 | IEA | GOA Database | nucleosome-dependent ATPase activity | |
GO:0070615 | IEA | InterPro | nucleosome-dependent ATPase activity | |
GO:0005524 | IEA | GOA Database | ATP binding | |
GO:0005524 | IEA | InterPro | ATP binding | |
GO:0008094 | IBA | GOA Database | ATPase, acting on DNA | |
GO:0003677 | IBA | GOA Database | DNA binding | |
GO:0000166 | IEA | GOA Database | nucleotide binding |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT2G28290 |
GO:0005634 | IBA IEA | GOA Database | nucleus | |
GO:0016020 | IEA | GOA Database | membrane | |
GO:0016021 | IEA | GOA Database | integral component of membrane |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
12.4.1.1.1 | Chromatin organisation.nucleosome remodeling.SWI/SNF chromatin remodeling complexes.core modules.ATPase component SYD/BRM/MINU |