Gene: Cfa015506
General Information
Structural Information
- Species Carpinus fangiana
- Gene Identifier Cfa015506
- Transcript Identifier Cfa015506.t1
- Gene Type Coding gene
- Location Cfa06 : 26531366-26559361 : positive
Gene Family Information
- ID HOM05D000104
- #Genes/#Species 3097/100
- Phylogenetic origin
- ID ORTHO05D005604
- #Genes/#Species 155/90
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Cfa015506.t1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:1900150 | ISO | PLAZA Integrative Orthology | regulation of defense response to fungus | AT2G28290 |
| GO:0009908 | ISO | PLAZA Integrative Orthology | flower development | AT2G28290 |
| GO:0009611 | ISO | PLAZA Integrative Orthology | response to wounding | AT2G28290 |
| GO:0010104 | ISO | PLAZA Integrative Orthology | regulation of ethylene-activated signaling pathway | AT2G28290 |
| GO:2000022 | ISO | PLAZA Integrative Orthology | regulation of jasmonic acid mediated signaling pathway | AT2G28290 |
| GO:0010199 | ISO | PLAZA Integrative Orthology | organ boundary specification between lateral organs and the meristem | AT2G28290 |
| GO:0040029 | ISO | PLAZA Integrative Orthology | regulation of gene expression, epigenetic | AT2G28290 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0070615 | IEA | InterPro | nucleosome-dependent ATPase activity | |
| GO:0042393 | IEA | InterPro | histone binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G28290 |
| GO:0003682 | ISO | PLAZA Integrative Orthology | chromatin binding | AT2G28290 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | InterPro | nucleus | |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT2G28290 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR000330 | SNF2, N-terminal |
| IPR029295 | Snf2, ATP coupling domain |
| IPR038718 | SNF2-like, N-terminal domain superfamily |
| IPR001650 | Helicase, C-terminal |
| IPR014978 | Glutamine-Leucine-Glutamine, QLQ |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| Mapman id | Description |
|---|---|
| 12.4.1.1.1 | Chromatin organisation.nucleosome remodeling.SWI/SNF chromatin remodeling complexes.core modules.ATPase component SYD/BRM/MINU |