Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR087G0001 Trochodendron aralioides HOM05D004134 ORTHO05D005240 3.6e-109 398.3 202 100.0
Nn1g06242 Nelumbo nucifera HOM05D004134 ORTHO05D005240 1.5e-46 190.3 108 85.2
TAR381G1335 Trochodendron aralioides HOM05D004134 ORTHO05D005240 4.7e-45 185.3 102 89.2
GSVIVG01004116001 Vitis vinifera HOM05D004134 ORTHO05D005240 1.2e-43 180.6 134 66.4
Thecc.01G149600 Theobroma cacao HOM05D004134 ORTHO05D005240 1.7e-42 176.8 140 63.6
Dinv19398 Davidia involucrata HOM05D004134 ORTHO05D005240 1.4e-41 173.7 108 75.9
Hma1.2p1_0427F.1_g150710 Hydrangea macrophylla HOM05D004134 ORTHO05D005240 1.4e-41 173.7 107 77.6
Duzib147G1693 Durio zibethinus HOM05D004134 ORTHO05D005240 5.4e-41 171.8 134 63.4
Atru.chr6.762 Acer truncatum HOM05D004134 ORTHO05D005240 3.5e-40 169.1 107 75.7
CANSAT54G0881 Cannabis sativa HOM05D004134 ORTHO05D005240 7.8e-40 167.9 134 61.9
Duzib264G0885 Durio zibethinus HOM05D004134 ORTHO05D005240 7.8e-40 167.9 124 67.7
QL02p100166 Quercus lobata HOM05D004134 ORTHO05D005240 7.8e-40 167.9 109 72.5
Dinv07474 Davidia involucrata HOM05D004134 ORTHO05D005240 1.3e-39 167.2 99 78.8
MSTRG.5116 Avicennia marina HOM05D004134 ORTHO05D005240 1.7e-39 166.8 105 76.2
Gohir.A12G002500 Gossypium hirsutum HOM05D004134 ORTHO05D005240 2.3e-39 166.4 134 61.9
Sabra03G0005000 Salix brachista HOM05D004134 ORTHO05D005240 2.3e-39 166.4 135 60.7
Gohir.D12G002200 Gossypium hirsutum HOM05D004134 ORTHO05D005240 3.0e-39 166.0 134 61.9
Gorai.008G001600 Gossypium raimondii HOM05D004134 ORTHO05D005240 3.0e-39 166.0 134 61.9
vmacro19872 Vaccinium macrocarpon HOM05D004134 ORTHO05D005240 3.0e-39 166.0 155 60.0
Lju50A15T20 Lonicera japonica HOM05D004134 ORTHO05D005240 3.9e-39 165.6 106 73.6
Peaxi162Scf00011g00938 Petunia axillaris HOM05D004134 ORTHO05D005240 3.9e-39 165.6 105 76.2
Rhsim10G0097200 Rhododendron simsii HOM05D004134 ORTHO05D005240 5.1e-39 165.2 106 74.5
RhsimUnG0241700 Rhododendron simsii HOM05D004134 ORTHO05D005240 5.1e-39 165.2 106 74.5
Nitab4.5_0000948g0120 Nicotiana tabacum HOM05D004134 ORTHO05D005240 8.7e-39 164.5 105 74.3
Haze_10066 Corylus avellana HOM05D004134 ORTHO05D005240 1.5e-38 163.7 108 71.3
Haze_10069 Corylus avellana HOM05D004134 ORTHO05D005240 1.5e-38 163.7 108 71.3
Potri.003G009600 Populus trichocarpa HOM05D004134 ORTHO05D005240 1.5e-38 163.7 106 72.6
unitig_899.g15494 Utricularia gibba HOM05D004134 ORTHO05D005240 1.5e-38 163.7 105 74.3
CSS0009525 Camellia sinensis var. sinensis HOM05D004134 ORTHO05D005240 1.9e-38 163.3 101 77.2
Sc12g0003380 Simmondsia chinensis HOM05D004134 ORTHO05D005240 1.9e-38 163.3 103 72.8
Aa31LG3G10940 Aethionema arabicum HOM05D004134 ORTHO05D005240 2.5e-38 162.9 109 69.7
Cpa.g.sc612.1 Carica papaya HOM05D004134 ORTHO05D005240 2.5e-38 162.9 101 75.2
Nitab4.5_0002596g0050 Nicotiana tabacum HOM05D004134 ORTHO05D005240 2.5e-38 162.9 105 73.3
Prupe.7G053600 Prunus persica HOM05D004134 ORTHO05D005240 2.5e-38 162.9 108 69.4
Sopen01g046140 Solanum pennellii HOM05D004134 ORTHO05D005240 2.5e-38 162.9 105 73.3
PGSC0003DMG400024925 Solanum tuberosum HOM05D004134 ORTHO05D005240 2.5e-38 162.9 105 73.3
THA.LOC104801417 Tarenaya hassleriana HOM05D004134 ORTHO05D005240 2.5e-38 162.9 104 74.0
Carub.0004s2260 Capsella rubella HOM05D004134 ORTHO05D005240 3.3e-38 162.5 103 72.8
MBI13_g20493_MAGBIO Magnolia biondii HOM05D004134 ORTHO05D005240 3.3e-38 162.5 90 85.6
CiPaw.05G006000 Carya illinoinensis HOM05D004134 ORTHO05D005240 4.3e-38 162.2 107 72.9
CSS0031590 Camellia sinensis var. sinensis HOM05D004134 ORTHO05D005240 7.3e-38 161.4 100 77.0
MD10G1070100 Malus domestica HOM05D004134 ORTHO05D005240 7.3e-38 161.4 108 69.4
BcaC02g12241 Brassica carinata HOM05D004134 ORTHO05D005240 9.6e-38 161.0 104 72.1
C04p06100 Brassica napus HOM05D004134 ORTHO05D005240 9.6e-38 161.0 104 72.1
BolC4t22236H Brassica oleracea HOM05D004134 ORTHO05D005240 9.6e-38 161.0 104 72.1
CAN.G798.51 Capsicum annuum HOM05D004134 ORTHO05D005240 1.3e-37 160.6 105 72.4
A03p25010 Brassica napus HOM05D004134 ORTHO05D005240 1.6e-37 160.2 104 71.2
BraA03t11704Z Brassica rapa HOM05D004134 ORTHO05D005240 1.6e-37 160.2 104 71.2
Sp4g27170 Schrenkiella parvula HOM05D004134 ORTHO05D005240 1.6e-37 160.2 104 72.1
AUR62027202 Chenopodium quinoa HOM05D004134 ORTHO05D005240 2.8e-37 159.5 112 68.8
Thhalv10001320m.g Eutrema salsugineum HOM05D004134 ORTHO05D005240 4.8e-37 158.7 104 71.2
C03p29850 Brassica napus HOM05D004134 ORTHO05D005240 6.2e-37 158.3 104 70.2
BolC3t15332H Brassica oleracea HOM05D004134 ORTHO05D005240 6.2e-37 158.3 104 70.2
Migut.B00788 Erythranthe guttata HOM05D004134 ORTHO05D005240 6.2e-37 158.3 105 71.4
AUR62003266 Chenopodium quinoa HOM05D004134 ORTHO05D005240 8.1e-37 157.9 111 68.5
Hund16551 Selenicereus undatus HOM05D004134 ORTHO05D005240 1.1e-36 157.5 104 73.1
BcaC01g05160 Brassica carinata HOM05D004134 ORTHO05D005240 1.4e-36 157.1 104 70.2
CARHR135440 Cardamine hirsuta HOM05D004134 ORTHO05D005240 1.8e-36 156.8 105 69.5
CsaV3_5G039580 Cucumis sativus L. HOM05D004134 ORTHO05D005240 1.8e-36 156.8 107 70.1
RcHm_v2.0_Chr7g0241541 Rosa chinensis HOM05D004134 ORTHO05D005240 2.4e-36 156.4 130 59.2
AL4G38180 Arabidopsis lyrata HOM05D004134 ORTHO05D005240 3.1e-36 156.0 107 69.2
Actinidia26163 Actinidia chinensis HOM05D004134 ORTHO05D005240 4.0e-36 155.6 98 74.5
arahy.Tifrunner.gnm1.ann1.FJZE1E Arachis hypogaea HOM05D004134 ORTHO05D005240 5.3e-36 155.2 104 71.2
arahy.Tifrunner.gnm1.ann1.PV76CP Arachis hypogaea HOM05D004134 ORTHO05D005240 5.3e-36 155.2 104 71.2
ClCG08G001520 Citrullus lanatus HOM05D004134 ORTHO05D005240 5.3e-36 155.2 104 72.1
FvH4_5g21650 Fragaria vesca HOM05D004134 ORTHO05D005240 5.3e-36 155.2 108 68.5
FAN18G3216 Fragaria x ananassa HOM05D004134 ORTHO05D005240 5.3e-36 155.2 108 68.5
Zm00001eb131370 Zea mays HOM05D004134 ORTHO05D005240 6.9e-36 154.8 104 68.3
RcHm_v2.0_Chr7g0209131 Rosa chinensis HOM05D004134 ORTHO05D005240 9.0e-36 154.5 132 57.6
COL.COLO4_33567 Corchorus olitorius HOM05D004134 ORTHO05D005240 1.2e-35 154.1 146 56.2
BcaB02g08952 Brassica carinata HOM05D004134 ORTHO05D005240 1.5e-35 153.7 100 71.0
MELO3C022134.2 Cucumis melo HOM05D004134 ORTHO05D005240 1.5e-35 153.7 104 70.2
FAN13G2390 Fragaria x ananassa HOM05D004134 ORTHO05D005240 1.5e-35 153.7 104 70.2
Oeu034147.1 Olea europaea HOM05D004134 ORTHO05D005240 1.5e-35 153.7 99 72.7
VMungo0540G2254 Vigna mungo HOM05D004134 ORTHO05D005240 1.5e-35 153.7 108 69.4
Glyma.16G003700 Glycine max HOM05D004134 ORTHO05D005240 2.0e-35 153.3 103 70.9
Phvul.006G218200 Phaseolus vulgaris HOM05D004134 ORTHO05D005240 2.0e-35 153.3 108 69.4
Ah.09g229700 Amaranthus hybridus HOM05D004134 ORTHO05D005240 2.6e-35 152.9 104 69.2
FAN04G2346 Fragaria x ananassa HOM05D004134 ORTHO05D005240 2.6e-35 152.9 108 67.6
Glyma.12G167800 Glycine max HOM05D004134 ORTHO05D005240 2.6e-35 152.9 103 71.8
Sed0024495 Sechium edule HOM05D004134 ORTHO05D005240 2.6e-35 152.9 107 67.3
RcHm_v2.0_Chr7g0241521 Rosa chinensis HOM05D004134 ORTHO05D005240 4.4e-35 152.1 133 57.9
SGA_v2.0_scaffold304G47905 Striga asiatica HOM05D004134 ORTHO05D005240 4.4e-35 152.1 101 70.3
AT2G40360 Arabidopsis thaliana HOM05D004134 ORTHO05D005240 5.8e-35 151.8 103 67.0
SGA_v2.0_scaffold272G46372 Striga asiatica HOM05D004134 ORTHO05D005240 5.8e-35 151.8 101 70.3
EL10Ac6g14818 Beta vulgaris HOM05D004134 ORTHO05D005240 7.6e-35 151.4 105 67.6
TWI23G0224 Tripterygium wilfordii HOM05D004134 ORTHO05D005240 7.6e-35 151.4 106 66.0
HanXRQChr07g0187421 Helianthus annuus HOM05D004134 ORTHO05D005240 9.9e-35 151.0 105 69.5
Lj8C283T12 Lonicera japonica HOM05D004134 ORTHO05D005240 1.3e-34 150.6 96 72.9
Lalb_Chr21g0308281 Lupinus albus HOM05D004134 ORTHO05D005240 1.7e-34 150.2 103 68.9
PGR042G0619 Punica granatum HOM05D004134 ORTHO05D005240 1.7e-34 150.2 95 73.7
Lj8C281T2 Lonicera japonica HOM05D004134 ORTHO05D005240 2.9e-34 149.4 96 71.9
A05p05210 Brassica napus HOM05D004134 ORTHO05D005240 3.8e-34 149.1 97 70.1
SalBow8G3818 Salvia bowleyana HOM05D004134 ORTHO05D005240 4.9e-34 148.7 105 67.6
Lj6g0001374 Lotus japonicus HOM05D004134 ORTHO05D005240 6.4e-34 148.3 102 67.6
SalBow1G3184 Salvia bowleyana HOM05D004134 ORTHO05D005240 6.4e-34 148.3 105 67.6
TPR.G2118 Trifolium pratense HOM05D004134 ORTHO05D005240 8.4e-34 147.9 101 69.3
BraA05t19492Z Brassica rapa HOM05D004134 ORTHO05D005240 1.4e-33 147.1 96 69.8
Ciclev10000416m.g Citrus clementina HOM05D004134 ORTHO05D005240 1.9e-33 146.7 98 72.4
Aqoxy6G03049 Aquilegia oxysepala HOM05D004134 ORTHO05D005240 4.2e-33 145.6 105 69.5
SalBow8G2435 Salvia bowleyana HOM05D004134 ORTHO05D005240 4.2e-33 145.6 105 66.7
Ca_00047_v3 Cicer arietinum L. HOM05D004134 ORTHO05D005240 5.4e-33 145.2 100 68.0
BcaB01g03295 Brassica carinata HOM05D004134 ORTHO05D005240 9.3e-33 144.4 95 68.4
Lsat_1_v5_gn_7_76380 Lactuca sativa HOM05D004134 ORTHO05D005240 9.3e-33 144.4 105 66.7
MD05G1062400 Malus domestica HOM05D004134 ORTHO05D005240 1.2e-32 144.1 98 67.3
Manes.02G223500 Manihot esculenta HOM05D004134 ORTHO05D005240 2.1e-32 143.3 97 69.1
ECA236G2574 Erigeron canadensis HOM05D004134 ORTHO05D005240 2.7e-32 142.9 105 65.7
Psat0s1535g0080 Pisum sativum HOM05D004134 ORTHO05D005240 2.7e-32 142.9 109 65.1
Eucgr.G00349 Eucalyptus grandis HOM05D004134 ORTHO05D005240 3.5e-32 142.5 97 70.1
Medtr2g006020 Medicago truncatula HOM05D004134 ORTHO05D005240 1.0e-31 141.0 101 65.3
ATR0681G288 Amborella trichopoda HOM05D004134 ORTHO05D005240 1.7e-31 140.2 103 64.1
CBR_g19000 Chara braunii HOM05D004134 ORTHO05D005240 2.3e-31 139.8 100 67.0
Cc07_g19170 Coffea canephora HOM05D004134 ORTHO05D005240 3.0e-31 139.4 95 68.4
PSO063G3695 Papaver somniferum HOM05D004134 ORTHO05D005240 3.9e-31 139.0 103 68.9
Cfa014311 Carpinus fangiana HOM05D004134 ORTHO05D001258 5.1e-31 138.7 95 66.3
ATR0598G150 Amborella trichopoda HOM05D004134 ORTHO05D005240 8.7e-31 137.9 90 70.0
SMO361G0066 Selaginella moellendorffii HOM05D004134 ORTHO05D005240 8.7e-31 137.9 102 61.8
AagrBONN_evm.TU.Sc2ySwM_344.2863 Anthoceros agrestis HOM05D004134 ORTHO05D005240 2.8e-29 132.9 98 64.3
SalBow8G0286 Salvia bowleyana HOM05D004134 ORTHO05D005240 4.8e-29 132.1 105 63.8
Pp3c18_14790 Physcomitrium patens HOM05D004134 ORTHO05D005240 8.1e-29 131.3 99 62.6
Mapoly0025s0073 Marchantia polymorpha HOM05D004134 ORTHO05D005240 1.4e-28 130.6 108 57.4
DCAR_001836 Daucus carota HOM05D004134 ORTHO05D005240 6.9e-28 128.3 91 68.1
Sabra01G0168600 Salix brachista HOM05D004134 ORTHO05D005240 1.2e-27 127.5 182 42.3
SMO004G0015 Selaginella moellendorffii HOM05D004134 ORTHO05D005240 3.4e-27 125.9 95 60.0
AL3G45050 Arabidopsis lyrata HOM05D004134 ORTHO05D005240 1.4e-25 120.6 89 65.2
PSO384G1237 Papaver somniferum HOM05D004134 ORTHO05D005240 5.1e-23 112.1 99 57.6
PSO339G3543 Papaver somniferum HOM05D004134 ORTHO05D005240 5.6e-22 108.6 99 55.6
Cre10.g417950 Chlamydomonas reinhardtii HOM05D004134 ORTHO05D005240 2.1e-21 106.7 97 56.7
PRCOL_00006650 Prasinoderma coloniale HOM05D004134 ORTHO05D005240 2.4e-20 103.2 154 37.0
HPP92_014183 Vanilla planifolia HOM05D004134 ORTHO05D005240 1.1e-17 94.4 115 47.8
MCO01G460 Micromonas commoda HOM05D004134 ORTHO05D005240 6.2e-13 78.6 79 44.3
Prupe.6G114000 Prunus persica HOM05D004134 ORTHO05D005240 2.2e-10 70.1 108 38.9
Cfa026475 Carpinus fangiana HOM05D004134 ORTHO05D005240 3.8e-10 69.3 100 37.0
Solyc01g103720.4 Solanum lycopersicum HOM05D004134 ORTHO05D005240 1.6e-08 63.9 43 67.4
Haze_26888 Corylus avellana HOM05D004134 ORTHO05D005240 2.1e-08 63.5 97 34.0


User provided reference genes

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