Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SpUn0431_0010 Schrenkiella parvula HOM05D002159 ORTHO05D372157 2.4e-69 265.4 136 100.0
AL6G35190 Arabidopsis lyrata HOM05D002159 ORTHO05D005625 2.2e-17 92.8 47 97.9
AT5G23880 Arabidopsis thaliana HOM05D002159 ORTHO05D005625 2.2e-17 92.8 47 97.9
C07p43800 Brassica napus HOM05D002159 ORTHO05D005625 2.2e-17 92.8 47 97.9
BolC7t44909H Brassica oleracea HOM05D002159 ORTHO05D005625 2.2e-17 92.8 47 97.9
CARHR189680 Cardamine hirsuta HOM05D002159 ORTHO05D005625 2.2e-17 92.8 47 97.9
Sp2g23400 Schrenkiella parvula HOM05D002159 ORTHO05D005625 2.2e-17 92.8 47 97.9
AL6G35160 Arabidopsis lyrata HOM05D002159 ORTHO05D005625 2.8e-17 92.4 89 61.8
Carub.0006s2160 Capsella rubella HOM05D002159 ORTHO05D005625 3.7e-17 92.0 47 95.7
BcaNung05469 Brassica carinata HOM05D002159 ORTHO05D005625 4.8e-17 91.7 47 95.7
A06p34690 Brassica napus HOM05D002159 ORTHO05D005625 4.8e-17 91.7 47 95.7
BraA06t26396Z Brassica rapa HOM05D002159 ORTHO05D005625 4.8e-17 91.7 47 95.7
BcaNung01838 Brassica carinata HOM05D002159 ORTHO05D005625 6.3e-17 91.3 47 95.7
Thhalv10003707m.g Eutrema salsugineum HOM05D002159 ORTHO05D005625 2.4e-16 89.4 47 91.5
THA.LOC104821393 Tarenaya hassleriana HOM05D002159 ORTHO05D005625 1.2e-15 87.0 49 89.8
DCAR_026334 Daucus carota HOM05D002159 ORTHO05D005625 7.7e-15 84.3 49 83.7
FvH4_7g29660 Fragaria vesca HOM05D002159 ORTHO05D005625 7.7e-15 84.3 53 77.4
FAN03G1172 Fragaria x ananassa HOM05D002159 ORTHO05D005625 7.7e-15 84.3 53 77.4
FAN06G3579 Fragaria x ananassa HOM05D002159 ORTHO05D005625 7.7e-15 84.3 53 77.4
FAN06G4426 Fragaria x ananassa HOM05D002159 ORTHO05D005625 7.7e-15 84.3 53 77.4
Atru.chr1.430 Acer truncatum HOM05D002159 ORTHO05D005625 1.3e-14 83.6 49 83.7
CANSAT21G0489 Cannabis sativa HOM05D002159 ORTHO05D005625 1.3e-14 83.6 49 83.7
RcHm_v2.0_Chr1g0377681 Rosa chinensis HOM05D002159 ORTHO05D005625 1.3e-14 83.6 49 81.6
Cpa.g.c26789.4 Carica papaya HOM05D002159 ORTHO05D005625 1.7e-14 83.2 49 83.7
Duzib084G0847 Durio zibethinus HOM05D002159 ORTHO05D005625 1.7e-14 83.2 49 83.7
FAN01G0872 Fragaria x ananassa HOM05D002159 ORTHO05D005625 1.7e-14 83.2 53 75.5
Gohir.A12G256700 Gossypium hirsutum HOM05D002159 ORTHO05D005625 1.7e-14 83.2 49 83.7
Gohir.D12G258000 Gossypium hirsutum HOM05D002159 ORTHO05D005625 1.7e-14 83.2 49 83.7
Gorai.008G276300 Gossypium raimondii HOM05D002159 ORTHO05D005625 1.7e-14 83.2 49 83.7
Aa31LG11G3180 Aethionema arabicum HOM05D002159 ORTHO05D005625 2.2e-14 82.8 49 85.7
Peaxi162Scf00444g00532 Petunia axillaris HOM05D002159 ORTHO05D005625 2.2e-14 82.8 49 83.7
Sp5g10280 Schrenkiella parvula HOM05D000510 ORTHO05D002064 2.2e-14 82.8 60 76.7
FAN03G0857 Fragaria x ananassa HOM05D002159 ORTHO05D005625 2.9e-14 82.4 53 75.5
FAN10G0118 Fragaria x ananassa HOM05D002159 ORTHO05D005625 2.9e-14 82.4 53 75.5
Ca_14555_v3 Cicer arietinum L. HOM05D002159 ORTHO05D005625 3.8e-14 82.0 49 81.6
Medtr1g050492 Medicago truncatula HOM05D002159 ORTHO05D005625 3.8e-14 82.0 49 81.6
TPR.G8152 Trifolium pratense HOM05D002159 ORTHO05D005625 3.8e-14 82.0 49 81.6
Cc02_g02790 Coffea canephora HOM05D002159 ORTHO05D005625 5.0e-14 81.6 49 81.6
CAN.G1175.3 Capsicum annuum HOM05D002159 ORTHO05D005625 8.5e-14 80.9 49 79.6
Ciclev10004414m.g Citrus clementina HOM05D002159 ORTHO05D005625 8.5e-14 80.9 49 81.6
COL.COLO4_28056 Corchorus olitorius HOM05D002159 ORTHO05D005625 8.5e-14 80.9 49 81.6
Nitab4.5_0000084g0030 Nicotiana tabacum HOM05D002159 ORTHO05D005625 8.5e-14 80.9 49 79.6
Solyc03g025540.3 Solanum lycopersicum HOM05D002159 ORTHO05D005625 8.5e-14 80.9 49 79.6
Sopen03g004380 Solanum pennellii HOM05D002159 ORTHO05D005625 8.5e-14 80.9 49 79.6
Eucgr.K00275 Eucalyptus grandis HOM05D002159 ORTHO05D005625 1.1e-13 80.5 49 79.6
Psat0s1874g0200 Pisum sativum HOM05D002159 ORTHO05D005625 1.1e-13 80.5 49 79.6
Prupe.2G296200 Prunus persica HOM05D002159 ORTHO05D005625 1.1e-13 80.5 49 77.6
Rhsim03G0187300 Rhododendron simsii HOM05D002159 ORTHO05D005625 1.1e-13 80.5 49 79.6
SGA_v2.0_scaffold10G05332 Striga asiatica HOM05D002159 ORTHO05D005625 1.1e-13 80.5 53 77.4
Duzib205G0713 Durio zibethinus HOM05D002159 ORTHO05D005625 1.9e-13 79.7 49 79.6
MD07G1272900 Malus domestica HOM05D002159 ORTHO05D005625 1.9e-13 79.7 99 50.5
Sabra16G0139100 Salix brachista HOM05D002159 ORTHO05D005625 1.9e-13 79.7 49 79.6
TWI34G0379 Tripterygium wilfordii HOM05D002159 ORTHO05D005625 1.9e-13 79.7 49 79.6
Actinidia02884 Actinidia chinensis HOM05D002159 ORTHO05D005625 3.2e-13 79.0 49 77.6
Actinidia25881 Actinidia chinensis HOM05D002159 ORTHO05D005625 3.2e-13 79.0 49 77.6
CSS0008751 Camellia sinensis var. sinensis HOM05D002159 ORTHO05D005625 3.2e-13 79.0 49 77.6
CSS0044503 Camellia sinensis var. sinensis HOM05D002159 ORTHO05D005625 3.2e-13 79.0 49 77.6
Thecc.03G179100 Theobroma cacao HOM05D002159 ORTHO05D005625 3.2e-13 79.0 49 79.6
vmacro06665 Vaccinium macrocarpon HOM05D002159 ORTHO05D005625 3.2e-13 79.0 49 77.6
ATR0680G292 Amborella trichopoda HOM05D002159 ORTHO05D005625 4.2e-13 78.6 49 79.6
Aqoxy7G00327 Aquilegia oxysepala HOM05D002159 ORTHO05D005625 5.5e-13 78.2 74 63.5
CiPaw.03G108100 Carya illinoinensis HOM05D002159 ORTHO05D005625 5.5e-13 78.2 50 76.0
Manes.01G126800 Manihot esculenta HOM05D002159 ORTHO05D005625 5.5e-13 78.2 49 77.6
Nitab4.5_0004439g0160 Nicotiana tabacum HOM05D002159 ORTHO05D005625 5.5e-13 78.2 49 77.6
Potri.001G231800 Populus trichocarpa HOM05D002159 ORTHO05D005625 5.5e-13 78.2 49 77.6
SalBow2G1087 Salvia bowleyana HOM05D002159 ORTHO05D005625 5.5e-13 78.2 49 77.6
Cfa023191 Carpinus fangiana HOM05D002159 ORTHO05D005625 7.2e-13 77.8 49 77.6
ClCG05G008140 Citrullus lanatus HOM05D002201 ORTHO05D005625 7.2e-13 77.8 48 81.2
Haze_13669 Corylus avellana HOM05D002159 ORTHO05D005625 7.2e-13 77.8 49 77.6
MELO3C006919.2 Cucumis melo HOM05D002159 ORTHO05D005625 7.2e-13 77.8 48 81.2
CsaV3_3G017220 Cucumis sativus L. HOM05D002159 ORTHO05D005625 7.2e-13 77.8 48 81.2
Lj2g0019958 Lotus japonicus HOM05D002159 ORTHO05D005625 7.2e-13 77.8 47 78.7
PGR142G0288 Punica granatum HOM05D002159 ORTHO05D005625 7.2e-13 77.8 48 79.2
arahy.Tifrunner.gnm1.ann1.F9YRCX Arachis hypogaea HOM05D002159 ORTHO05D005625 9.4e-13 77.4 49 75.5
Lj8C239G4 Lonicera japonica HOM05D002159 ORTHO05D005625 9.4e-13 77.4 49 79.6
HPP92_025730 Vanilla planifolia HOM05D002159 ORTHO05D005625 9.4e-13 77.4 48 81.2
HPP92_025733 Vanilla planifolia HOM05D002159 ORTHO05D005625 9.4e-13 77.4 48 81.2
Glyma.09G136900 Glycine max HOM05D002159 ORTHO05D005625 1.2e-12 77.0 48 79.2
Phvul.004G114000 Phaseolus vulgaris HOM05D002159 ORTHO05D005625 1.2e-12 77.0 48 79.2
QL09p013785 Quercus lobata HOM05D002159 ORTHO05D005625 1.2e-12 77.0 49 75.5
GSVIVG01028919001 Vitis vinifera HOM05D002159 ORTHO05D005625 1.2e-12 77.0 49 77.6
PSO782G0249 Papaver somniferum HOM05D002159 ORTHO05D005625 1.6e-12 76.6 49 73.5
HPP92_025761 Vanilla planifolia HOM05D002159 ORTHO05D005625 1.6e-12 76.6 46 82.6
ECA238G4262 Erigeron canadensis HOM05D002159 ORTHO05D005625 2.7e-12 75.9 49 75.5
HanXRQChr14g0462121 Helianthus annuus HOM05D002159 ORTHO05D005625 2.7e-12 75.9 49 75.5
Nn1g01521 Nelumbo nucifera HOM05D002159 ORTHO05D005625 2.7e-12 75.9 48 79.2
AUR62015961 Chenopodium quinoa HOM05D002159 ORTHO05D005625 3.6e-12 75.5 48 79.2
AUR62021167 Chenopodium quinoa HOM05D002159 ORTHO05D005625 3.6e-12 75.5 48 79.2
Dinv28421 Davidia involucrata HOM05D002159 ORTHO05D005625 3.6e-12 75.5 47 76.6
PSO478G3748 Papaver somniferum HOM05D002159 ORTHO05D005625 3.6e-12 75.5 49 71.4
Os09g0569400 Oryza sativa ssp. japonica HOM05D002159 ORTHO05D005625 4.7e-12 75.1 47 76.6
TAR629G0581 Trochodendron aralioides HOM05D002159 ORTHO05D005625 4.7e-12 75.1 49 75.5
VMungo0464G2116 Vigna mungo HOM05D002159 ORTHO05D005625 4.7e-12 75.1 48 77.1
EL10Ac3g05612 Beta vulgaris HOM05D002159 ORTHO05D005625 6.1e-12 74.7 48 77.1
Hma1.2p1_1604F.1_g293320 Hydrangea macrophylla HOM05D002159 ORTHO05D005625 7.9e-12 74.3 49 77.6
Migut.F01111 Erythranthe guttata HOM05D002159 ORTHO05D005625 1.0e-11 73.9 49 73.5
Glyma.16G182300 Glycine max HOM05D002159 ORTHO05D005625 1.0e-11 73.9 48 77.1
Lj1A1000T74 Lonicera japonica HOM05D002159 ORTHO05D005625 1.0e-11 73.9 49 75.5
Ah.13g068620 Amaranthus hybridus HOM05D002159 ORTHO05D005625 1.4e-11 73.6 48 75.0
Lalb_Chr03g0034671 Lupinus albus HOM05D002159 ORTHO05D005625 1.4e-11 73.6 49 75.5
MD01G1203600 Malus domestica HOM05D002159 ORTHO05D005625 1.8e-11 73.2 48 75.0
unitig_26.g10199 Utricularia gibba HOM05D002159 ORTHO05D005625 1.8e-11 73.2 42 85.7
CARHR161650 Cardamine hirsuta HOM05D000510 ORTHO05D002064 2.3e-11 72.8 60 66.7
Lsat_1_v5_gn_2_132660 Lactuca sativa HOM05D002159 ORTHO05D005625 2.3e-11 72.8 49 71.4
Glyma.11G171003 Glycine max HOM05D002159 ORTHO05D005625 3.0e-11 72.4 48 75.0
Hund04761 Selenicereus undatus HOM05D002159 ORTHO05D005625 3.0e-11 72.4 48 72.9
Zm00001eb162800 Zea mays HOM05D002159 ORTHO05D005625 3.0e-11 72.4 46 76.1
Sed0009742 Sechium edule HOM05D002159 ORTHO05D005625 3.9e-11 72.0 48 75.0
Sc13g0008820 Simmondsia chinensis HOM05D002159 ORTHO05D005625 6.7e-11 71.2 48 75.0
CDE06G0059 Ceratophyllum demersum HOM05D002159 ORTHO05D005625 5.7e-10 68.2 49 67.3
SMO111G0062 Selaginella moellendorffii HOM05D002159 ORTHO05D005625 1.1e-08 63.9 48 66.7
Psat0s2150g0120 Pisum sativum HOM05D002159 ORTHO05D005625 1.8e-08 63.2 40 75.0
Mapoly0007s0176 Marchantia polymorpha HOM05D002159 ORTHO05D005625 3.1e-08 62.4 48 68.8
Pp3c9_11100 Physcomitrium patens HOM05D002159 ORTHO05D005625 9.1e-08 60.8 46 69.6
CBR_g4749 Chara braunii HOM05D002159 ORTHO05D005625 1.5e-07 60.1 68 54.4
PSO423G0230 Papaver somniferum HOM05D002159 ORTHO05D005625 2.6e-07 59.3 85 44.7


User provided reference genes

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