Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g15120 Schrenkiella parvula HOM05D004190 ORTHO05D004692 3.6e-100 368.2 182 100.0
BraA01t02543Z Brassica rapa HOM05D004190 ORTHO05D004692 1.3e-78 296.6 185 82.2
BcaC09g49754 Brassica carinata HOM05D004190 ORTHO05D004692 2.2e-78 295.8 186 81.7
C01p33300 Brassica napus HOM05D004190 ORTHO05D004692 6.5e-78 294.3 185 81.6
BolC1t03263H Brassica oleracea HOM05D004190 ORTHO05D004692 3.2e-77 292.0 185 81.1
Thhalv10002683m.g Eutrema salsugineum HOM05D004190 ORTHO05D004692 4.4e-74 281.6 177 80.8
BcaB05g23553 Brassica carinata HOM05D004190 ORTHO05D004692 5.5e-69 264.6 184 75.5
AL5G25450 Arabidopsis lyrata HOM05D004190 ORTHO05D004692 3.4e-66 255.4 176 75.0
Carub.0005s1285 Capsella rubella HOM05D004190 ORTHO05D004692 7.5e-66 254.2 189 70.9
AT3G46580 Arabidopsis thaliana HOM05D004190 ORTHO05D004692 2.8e-65 252.3 187 72.2
Sp6g21060 Schrenkiella parvula HOM05D004190 ORTHO05D004692 1.7e-49 199.9 182 57.7
Aa31LG4G15580 Aethionema arabicum HOM05D004190 ORTHO05D004692 2.9e-49 199.1 169 61.5
CARHR155230 Cardamine hirsuta HOM05D004190 ORTHO05D004692 4.1e-48 195.3 176 62.5
BraA03t10485Z Brassica rapa HOM05D004190 ORTHO05D004692 2.0e-47 193.0 181 54.7
Carub.0008s2005 Capsella rubella HOM05D004190 ORTHO05D004692 1.0e-46 190.7 175 58.3
BcaC01g06528 Brassica carinata HOM05D004190 ORTHO05D004692 1.2e-44 183.7 184 54.3
Thhalv10014530m.g Eutrema salsugineum HOM05D004190 ORTHO05D004692 2.1e-44 183.0 185 56.8
AL8G35820 Arabidopsis lyrata HOM05D004190 ORTHO05D004692 1.8e-43 179.9 176 56.2
Aa31sc23G430 Aethionema arabicum HOM05D004190 ORTHO05D004692 3.1e-43 179.1 190 52.6
CARHR285750 Cardamine hirsuta HOM05D004190 ORTHO05D004692 3.4e-42 175.6 174 52.9
BcaB01g04586 Brassica carinata HOM05D004190 ORTHO05D004692 1.3e-41 173.7 181 52.5
BraA02t05794Z Brassica rapa HOM05D004190 ORTHO05D004692 1.3e-41 173.7 171 55.6
AT5G59380 Arabidopsis thaliana HOM05D004190 ORTHO05D004692 6.4e-41 171.4 175 54.3
BcaB01g04590 Brassica carinata HOM05D004190 ORTHO05D004692 1.9e-40 169.9 182 52.7
BcaB05g22507 Brassica carinata HOM05D004190 ORTHO05D004692 4.1e-40 168.7 172 54.1
BcaC04g19780 Brassica carinata HOM05D004190 ORTHO05D004692 1.6e-39 166.8 184 51.1
C09p51780 Brassica napus HOM05D000173 ORTHO05D004692 1.6e-39 166.8 184 51.1
BolC9t58040H Brassica oleracea HOM05D000173 ORTHO05D004692 1.6e-39 166.8 184 51.1
BcaC03g14013 Brassica carinata HOM05D004190 ORTHO05D004692 2.1e-39 166.4 171 53.8
BolC2t07349H Brassica oleracea HOM05D004190 ORTHO05D004692 2.1e-39 166.4 171 53.8
C03p13790 Brassica napus HOM05D004190 ORTHO05D004692 4.6e-39 165.2 182 51.1
C02p12490 Brassica napus HOM05D000173 ORTHO05D000316 7.8e-39 164.5 171 53.2
BolC3t13827H Brassica oleracea HOM05D004190 ORTHO05D004692 1.3e-38 163.7 182 51.1
THA.LOC104810778 Tarenaya hassleriana HOM05D004190 ORTHO05D004692 1.7e-38 163.3 189 51.3
BraA10t43742Z Brassica rapa HOM05D000173 ORTHO05D000316 3.9e-38 162.2 183 49.7
THA.LOC104814877 Tarenaya hassleriana HOM05D004190 ORTHO05D004692 2.1e-36 156.4 185 53.5
BcaB08g36263 Brassica carinata HOM05D004190 ORTHO05D004692 1.2e-34 150.6 184 49.5
CiPaw.04G135700 Carya illinoinensis HOM05D004190 ORTHO05D004692 1.2e-31 140.6 175 45.1
Gohir.D13G232900 Gossypium hirsutum HOM05D004190 ORTHO05D004692 3.5e-31 139.0 174 43.7
Gorai.013G263700 Gossypium raimondii HOM05D004190 ORTHO05D004692 4.6e-31 138.7 174 43.7
Gohir.A13G227300 Gossypium hirsutum HOM05D004190 ORTHO05D004692 3.0e-30 136.0 171 43.9
Thecc.09G321100 Theobroma cacao HOM05D004190 ORTHO05D004692 5.1e-30 135.2 178 43.3
COL.COLO4_18512 Corchorus olitorius HOM05D004190 ORTHO05D004692 6.6e-30 134.8 187 42.2
Gorai.009G099200 Gossypium raimondii HOM05D004190 ORTHO05D004692 2.5e-29 132.9 183 41.5
Cpa.g.sc81.141 Carica papaya HOM05D004190 ORTHO05D004692 5.6e-29 131.7 171 43.3
Duzib150G1353 Durio zibethinus HOM05D004190 ORTHO05D004692 1.2e-28 130.6 166 41.6
Gohir.A05G095600 Gossypium hirsutum HOM05D004190 ORTHO05D004692 2.1e-28 129.8 177 41.8
CsaV3_1G034280 Cucumis sativus L. HOM05D004190 ORTHO05D004692 6.2e-28 128.3 177 40.1
Manes.01G173632 Manihot esculenta HOM05D004190 ORTHO05D004692 6.2e-28 128.3 159 44.0
Duzib170G0106 Durio zibethinus HOM05D004190 ORTHO05D004692 8.1e-28 127.9 174 43.1
Atru.chr3.3912 Acer truncatum HOM05D004190 ORTHO05D004692 2.4e-27 126.3 191 37.7
Sed0018693 Sechium edule HOM05D004190 ORTHO05D004692 2.4e-27 126.3 164 45.1
Gohir.D05G095900 Gossypium hirsutum HOM05D004190 ORTHO05D004692 3.1e-27 125.9 177 40.7
Prupe.6G076700 Prunus persica HOM05D004190 ORTHO05D004692 4.0e-27 125.6 145 44.1
CiPaw.13G093900 Carya illinoinensis HOM05D004190 ORTHO05D004692 5.2e-27 125.2 166 42.2
ClCG03G001470 Citrullus lanatus HOM05D004190 ORTHO05D004692 8.9e-27 124.4 176 39.8
MD03G1092700 Malus domestica HOM05D004190 ORTHO05D004692 9.9e-26 120.9 163 44.8
Sed0024869 Sechium edule HOM05D004190 ORTHO05D004692 4.9e-25 118.6 164 41.5
FvH4_3g36180 Fragaria vesca HOM05D004190 ORTHO05D004692 6.4e-25 118.2 173 38.7
FAN25G3130 Fragaria x ananassa HOM05D004190 ORTHO05D004692 1.1e-24 117.5 173 38.7
FAN11G2049 Fragaria x ananassa HOM05D004190 ORTHO05D004692 5.4e-24 115.2 164 36.6
FAN21G2646 Fragaria x ananassa HOM05D004190 ORTHO05D004692 7.1e-24 114.8 173 38.2
FAN16G2398 Fragaria x ananassa HOM05D004190 ORTHO05D004692 9.3e-24 114.4 145 40.0
RcHm_v2.0_Chr5g0064931 Rosa chinensis HOM05D004190 ORTHO05D004692 2.7e-23 112.8 177 37.9
TWI31G0561 Tripterygium wilfordii HOM05D004190 ORTHO05D004692 3.5e-23 112.5 140 42.1
MD11G1107500 Malus domestica HOM05D004190 ORTHO05D004692 4.6e-23 112.1 164 42.1
TAR623G1294 Trochodendron aralioides HOM05D004190 ORTHO05D004692 4.6e-23 112.1 190 34.7
Ciclev10029152m.g Citrus clementina HOM05D004190 ORTHO05D004692 7.8e-23 111.3 176 40.3
Aa31LG8G9210 Aethionema arabicum HOM05D004190 ORTHO05D004692 2.3e-22 109.8 170 41.8
Eucgr.J02050 Eucalyptus grandis HOM05D004190 ORTHO05D004692 5.1e-22 108.6 186 36.0
Potri.009G031100 Populus trichocarpa HOM05D004190 ORTHO05D004692 6.6e-22 108.2 173 37.6
Actinidia07264 Actinidia chinensis HOM05D004190 ORTHO05D004692 1.9e-21 106.7 166 38.6
TWI79G1380 Tripterygium wilfordii HOM05D004190 ORTHO05D004692 1.9e-21 106.7 135 40.7
CDE02G2475 Ceratophyllum demersum HOM05D004190 ORTHO05D004692 2.5e-21 106.3 147 38.1
PGR119G1862 Punica granatum HOM05D004190 ORTHO05D004692 2.5e-21 106.3 186 37.1
GSVIVG01024954001 Vitis vinifera HOM05D004190 ORTHO05D004692 5.6e-21 105.1 140 42.1
Sc24g0002450 Simmondsia chinensis HOM05D004190 ORTHO05D004692 9.6e-21 104.4 175 40.6
Haze_24100 Corylus avellana HOM05D004190 ORTHO05D004692 1.6e-20 103.6 138 40.6
CANSAT54G1895 Cannabis sativa HOM05D004190 ORTHO05D004692 2.1e-20 103.2 180 35.6
Dinv08914 Davidia involucrata HOM05D004190 ORTHO05D004692 8.1e-20 101.3 132 41.7
Ah.08g219540 Amaranthus hybridus HOM05D004190 ORTHO05D004692 1.1e-19 100.9 175 41.7
Nn2g13344 Nelumbo nucifera HOM05D004190 ORTHO05D004692 1.1e-19 100.9 177 35.6
Ah.15g097420 Amaranthus hybridus HOM05D004190 ORTHO05D004692 4.0e-19 99.0 154 39.6
Sc21g0005810 Simmondsia chinensis HOM05D004190 ORTHO05D004692 1.2e-18 97.4 169 36.7
Hund18906 Selenicereus undatus HOM05D004190 ORTHO05D004692 2.0e-18 96.7 201 34.8
A01p26200 Brassica napus HOM05D004190 ORTHO05D004692 3.4e-18 95.9 57 78.9
Solyc11g068740.2 Solanum lycopersicum HOM05D004190 ORTHO05D004692 1.3e-17 94.0 143 39.2
Sopen11g027450 Solanum pennellii HOM05D004190 ORTHO05D004692 1.3e-17 94.0 143 39.2
Hund04953 Selenicereus undatus HOM05D004190 ORTHO05D004692 2.9e-17 92.8 192 35.9
MBI05_g22031_MAGBIO Magnolia biondii HOM05D004190 ORTHO05D004692 4.9e-17 92.0 163 35.0
EL10Ac7g16022 Beta vulgaris HOM05D004190 ORTHO05D004692 8.4e-17 91.3 144 39.6
PGSC0003DMG400026344 Solanum tuberosum HOM05D004190 ORTHO05D004692 1.1e-16 90.9 142 38.0
Haze_12048 Corylus avellana HOM05D004190 ORTHO05D004692 1.9e-16 90.1 261 26.8
Oeu048854.1 Olea europaea HOM05D004190 ORTHO05D004692 2.4e-16 89.7 143 37.8
Dinv22804 Davidia involucrata HOM05D004190 ORTHO05D004692 4.2e-16 89.0 135 38.5
Nitab4.5_0001135g0020 Nicotiana tabacum HOM05D004190 ORTHO05D004692 5.4e-16 88.6 155 33.5
Cfa011508 Carpinus fangiana HOM05D004190 ORTHO05D004692 7.1e-16 88.2 94 50.0
Peaxi162Scf00224g00513 Petunia axillaris HOM05D004190 ORTHO05D004692 7.1e-16 88.2 168 32.1
Sabra09G0021900 Salix brachista HOM05D004190 ORTHO05D004692 9.3e-16 87.8 199 32.2
Nitab4.5_0003516g0050 Nicotiana tabacum HOM05D004190 ORTHO05D004692 1.6e-15 87.0 168 33.9
QL01p031797 Quercus lobata HOM05D004190 ORTHO05D004692 1.3e-14 84.0 255 26.3
SHI05942 Sapria himalayana HOM05D004190 ORTHO05D004692 3.0e-14 82.8 150 33.3
ATR0559G266 Amborella trichopoda HOM05D004190 ORTHO05D004692 3.9e-14 82.4 148 36.5
Rhsim13G0195100 Rhododendron simsii HOM05D004190 ORTHO05D004692 5.1e-14 82.0 225 30.2
Hma1.2p1_0220F.1_g093040 Hydrangea macrophylla HOM05D004190 ORTHO05D004692 6.7e-14 81.6 143 32.9
Hma1.2p1_1227F.1_g268580 Hydrangea macrophylla HOM05D004190 ORTHO05D004692 6.7e-14 81.6 143 32.9
PGSC0003DMG400024773 Solanum tuberosum HOM05D004190 ORTHO05D004692 8.7e-14 81.3 143 33.6
Potri.001G240100 Populus trichocarpa HOM05D004190 ORTHO05D004692 5.6e-13 78.6 73 53.4
HanXRQChr03g0089211 Helianthus annuus HOM05D004190 ORTHO05D004692 1.6e-12 77.0 176 32.4
CSS0021452 Camellia sinensis var. sinensis HOM05D004190 ORTHO05D004692 2.1e-12 76.6 113 34.5
Gorai.001G110900 Gossypium raimondii HOM05D004190 ORTHO05D004692 2.8e-12 76.3 76 48.7
Duzib093G1405 Durio zibethinus HOM05D006496 ORTHO05D004692 6.2e-12 75.1 153 30.7
Gohir.D07G103000 Gossypium hirsutum HOM05D004190 ORTHO05D004692 8.1e-12 74.7 76 47.4
Aqoxy4G02933 Aquilegia oxysepala HOM05D004190 ORTHO05D004692 1.1e-11 74.3 138 34.1
Cc01_g08740 Coffea canephora HOM05D004190 ORTHO05D004692 2.4e-11 73.2 176 29.0
Lsat_1_v5_gn_3_111560 Lactuca sativa HOM05D004190 ORTHO05D004692 4.0e-11 72.4 177 30.5
CAN.G745.23 Capsicum annuum HOM05D004190 ORTHO05D004692 6.9e-11 71.6 143 31.5
DCAR_002216 Daucus carota HOM05D002742 ORTHO05D002959 9.0e-11 71.2 125 37.6
CAN.G1733.5 Capsicum annuum HOM05D004190 ORTHO05D004692 2.6e-10 69.7 139 30.9
BolC3t13826H Brassica oleracea HOM05D000021 ORTHO05D000010 3.4e-10 69.3 54 55.6
ECA240G3776 Erigeron canadensis HOM05D004190 ORTHO05D000203 4.5e-10 68.9 177 29.9
C03p13770 Brassica napus HOM05D000021 ORTHO05D000010 5.8e-10 68.6 54 55.6
HanXRQChr13g0419771 Helianthus annuus HOM05D004190 ORTHO05D004692 7.6e-10 68.2 144 32.6
SEGI_27640 Sequoiadendron giganteum HOM05D027190 ORTHO05D004692 7.6e-10 68.2 132 32.6
MD03G1099400 Malus domestica HOM05D006496 ORTHO05D008390 1.3e-09 67.4 158 31.6
CAN.G420.5 Capsicum annuum HOM05D006496 ORTHO05D008390 1.7e-09 67.0 143 32.2
CAN.G745.27 Capsicum annuum HOM05D004190 ORTHO05D004692 1.7e-09 67.0 117 35.9
CDE08G1317 Ceratophyllum demersum HOM05D004190 ORTHO05D004692 2.9e-09 66.2 99 38.4
SEGI_09707 Sequoiadendron giganteum HOM05D004190 ORTHO05D004692 2.9e-09 66.2 141 34.8
SEGI_38205 Sequoiadendron giganteum HOM05D027190 ORTHO05D004692 2.9e-09 66.2 125 32.8
SEGI_27595 Sequoiadendron giganteum HOM05D027190 ORTHO05D004692 3.8e-09 65.9 125 32.0
ECA248G1113 Erigeron canadensis HOM05D006496 ORTHO05D008390 8.4e-09 64.7 147 30.6
FAN09G4791 Fragaria x ananassa HOM05D004190 ORTHO05D022494 1.1e-08 64.3 158 26.6
FAN14G3185 Fragaria x ananassa HOM05D022761 ORTHO05D022494 1.1e-08 64.3 158 26.6
Oeu002348.1 Olea europaea HOM05D004190 ORTHO05D004692 1.1e-08 64.3 116 34.5
Lsat_1_v5_gn_5_167360 Lactuca sativa HOM05D006496 ORTHO05D008390 1.4e-08 63.9 159 30.2
Hund04996 Selenicereus undatus HOM05D006496 ORTHO05D008390 1.9e-08 63.5 139 31.7
Potri.009G027600 Populus trichocarpa HOM05D006496 ORTHO05D008390 2.4e-08 63.2 135 28.9
CAN.G1733.7 Capsicum annuum HOM05D000006 ORTHO05D004030 3.2e-08 62.8 122 32.0
FvH4_6g13651 Fragaria vesca HOM05D022761 ORTHO05D022494 4.2e-08 62.4 158 25.9
SEGI_04263 Sequoiadendron giganteum HOM05D016141 ORTHO05D004692 4.2e-08 62.4 54 51.9
PGSC0003DMG400015535 Solanum tuberosum HOM05D006496 ORTHO05D008390 4.2e-08 62.4 142 32.4
HanXRQChr01g0009851 Helianthus annuus HOM05D006496 ORTHO05D008390 5.5e-08 62.0 179 29.1
Manes.04G031000 Manihot esculenta HOM05D006496 ORTHO05D008390 7.1e-08 61.6 147 29.3
vmacro03111 Vaccinium macrocarpon HOM05D006496 ORTHO05D008390 7.1e-08 61.6 136 33.1
MELO3C020629.2 Cucumis melo HOM05D004190 ORTHO05D004692 9.3e-08 61.2 49 53.1
RcHm_v2.0_Chr5g0062931 Rosa chinensis HOM05D006496 ORTHO05D008390 9.3e-08 61.2 153 32.0
CAN.G745.26 Capsicum annuum HOM05D004190 ORTHO05D004692 1.2e-07 60.8 146 30.8
Migut.N02470 Erythranthe guttata HOM05D004190 ORTHO05D004692 1.2e-07 60.8 119 35.3
PSO339G5527 Papaver somniferum HOM05D066660 ORTHO05D004692 1.6e-07 60.5 113 37.2
PSO384G5141 Papaver somniferum HOM05D066660 ORTHO05D004692 1.6e-07 60.5 113 37.2
CSS0042381 Camellia sinensis var. sinensis HOM05D006496 ORTHO05D008390 2.1e-07 60.1 146 30.1
Sopen11g030740 Solanum pennellii HOM05D006496 ORTHO05D008390 2.1e-07 60.1 142 31.7
SalBow3G0001 Salvia bowleyana HOM05D004190 ORTHO05D004692 3.5e-07 59.3 124 36.3
SalBow3G1961 Salvia bowleyana HOM05D006496 ORTHO05D008390 3.5e-07 59.3 142 26.8
Rhsim13G0086700 Rhododendron simsii HOM05D006496 ORTHO05D008390 6.0e-07 58.5 137 31.4
Aqoxy4G00226 Aquilegia oxysepala HOM05D004190 ORTHO05D004692 1.0e-06 57.8 141 31.2
SGA_v2.0_scaffold295G47507 Striga asiatica HOM05D004190 ORTHO05D004692 3.9e-06 55.8 80 40.0
ATR0680G240 Amborella trichopoda HOM05D003520 ORTHO05D003332 5.1e-06 55.5 82 39.0
CARHR264240 Cardamine hirsuta HOM05D004190 ORTHO05D004692 5.1e-06 55.5 57 49.1
MD03G1099500 Malus domestica HOM05D006496 ORTHO05D008390 5.1e-06 55.5 177 27.1
SEGI_35246 Sequoiadendron giganteum HOM05D004190 ORTHO05D004692 5.1e-06 55.5 101 38.6
CAN.G1733.2 Capsicum annuum HOM05D004190 ORTHO05D004692 6.7e-06 55.1 124 30.6


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