Gene: PSO339G5527
General Information
Structural Information
- Species Papaver somniferum
- Gene Identifier PSO339G5527
- Transcript Identifier PSO339G5527.01
- Gene Type Coding gene
- Location NC_039366.1 : 150273212-150276270 : positive
Gene Family Information
- ID HOM05D066660
- #Genes/#Species 2/1
- Phylogenetic origin
- ID ORTHO05D004692
- #Genes/#Species 173/77
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid rna-XM_026556181.1
- pid XP_026411966.1
- id gene-LOC113307729
Descriptions
- product uncharacterized LOC113307729
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G46580 |
| GO:0051747 | ISO | PLAZA Integrative Orthology | cytosine C-5 DNA demethylase activity | AT5G59380 |
| GO:0008327 | ISO | PLAZA Integrative Orthology | methyl-CpG binding | AT3G46580 |
| GO:0043621 | ISO | PLAZA Integrative Orthology | protein self-association | AT3G46580 |
| GO:0019899 | ISO | PLAZA Integrative Orthology | enzyme binding | AT3G46580 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT3G46580 |
| GO:0000792 | ISO | PLAZA Integrative Orthology | heterochromatin | AT3G46580 |
| GO:0010370 | ISO | PLAZA Integrative Orthology | perinucleolar chromocenter | AT3G46580 |
| GO:0005731 | ISO | PLAZA Integrative Orthology | nucleolus organizer region | AT5G59380 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 12.5.4.2 | Chromatin organisation.DNA methylation.cytosine methylation reader activities.methylation reader (MBD5-6) |