Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen06g027930 Solanum pennellii HOM05D000924 ORTHO05D001209 3.9e-76 288.1 150 100.0
Solyc06g071620.3 Solanum lycopersicum HOM05D000924 ORTHO05D001209 1.9e-67 259.2 149 90.6
Peaxi162Scf00064g01426 Petunia axillaris HOM05D000924 ORTHO05D001209 6.2e-34 147.9 139 64.0
EL10Ac2g02545 Beta vulgaris HOM05D000924 ORTHO05D001209 1.8e-33 146.4 140 64.3
CAN.G1095.6 Capsicum annuum HOM05D000924 ORTHO05D001209 5.3e-33 144.8 139 64.0
COL.COLO4_20702 Corchorus olitorius HOM05D000924 ORTHO05D001209 5.3e-33 144.8 139 64.7
Solyc06g082100.4 Solanum lycopersicum HOM05D000924 ORTHO05D001209 6.9e-33 144.4 139 63.3
PGSC0003DMG400030366 Solanum tuberosum HOM05D000924 ORTHO05D001209 6.9e-33 144.4 139 63.3
CAN.G993.32 Capsicum annuum HOM05D000924 ORTHO05D001209 9.0e-33 144.1 130 66.2
Eucgr.F01825 Eucalyptus grandis HOM05D000924 ORTHO05D001209 1.2e-32 143.7 139 61.9
Nitab4.5_0002503g0090 Nicotiana tabacum HOM05D000924 ORTHO05D001209 2.0e-32 142.9 133 60.2
TAR381G1514 Trochodendron aralioides HOM05D000924 ORTHO05D001209 4.5e-32 141.7 138 58.7
Gohir.A10G187300 Gossypium hirsutum HOM05D000924 ORTHO05D001209 5.8e-32 141.4 139 62.6
Gohir.D10G194400 Gossypium hirsutum HOM05D000924 ORTHO05D001209 5.8e-32 141.4 139 62.6
Gorai.011G217300 Gossypium raimondii HOM05D000924 ORTHO05D001209 5.8e-32 141.4 139 62.6
Duzib128G1905 Durio zibethinus HOM05D000924 ORTHO05D001209 7.6e-32 141.0 139 61.9
Hund05759 Selenicereus undatus HOM05D000924 ORTHO05D001209 2.2e-31 139.4 140 63.6
Cpa.g.sc36.108 Carica papaya HOM05D000924 ORTHO05D001209 2.9e-31 139.0 139 61.9
Manes.18G005100 Manihot esculenta HOM05D000924 ORTHO05D001209 2.9e-31 139.0 139 62.6
Migut.C00343 Erythranthe guttata HOM05D000924 ORTHO05D001209 3.8e-31 138.7 138 60.9
CSS0036316 Camellia sinensis var. sinensis HOM05D000924 ORTHO05D001209 4.9e-31 138.3 140 60.7
Nitab4.5_0003811g0010 Nicotiana tabacum HOM05D000924 ORTHO05D001209 4.9e-31 138.3 134 59.0
RcHm_v2.0_Chr7g0209461 Rosa chinensis HOM05D000924 ORTHO05D001209 6.4e-31 137.9 139 61.9
GSVIVG01010769001 Vitis vinifera HOM05D000924 ORTHO05D001209 6.4e-31 137.9 141 61.7
Ah.01g015930 Amaranthus hybridus HOM05D000924 ORTHO05D001209 8.4e-31 137.5 140 60.7
Lj5C314G2 Lonicera japonica HOM05D000924 ORTHO05D001209 8.4e-31 137.5 138 60.1
arahy.Tifrunner.gnm1.ann1.L2QDU1 Arachis hypogaea HOM05D000924 ORTHO05D001209 1.1e-30 137.1 140 60.7
Dinv10292 Davidia involucrata HOM05D000924 ORTHO05D001209 1.1e-30 137.1 139 57.6
Nitab4.5_0004954g0020 Nicotiana tabacum HOM05D000924 ORTHO05D001209 1.1e-30 137.1 139 61.9
PGR083G1659 Punica granatum HOM05D000924 ORTHO05D001209 1.1e-30 137.1 140 60.7
Thecc.10G149400 Theobroma cacao HOM05D000924 ORTHO05D001209 1.1e-30 137.1 139 61.9
Cfa014157 Carpinus fangiana HOM05D000924 ORTHO05D001209 1.4e-30 136.7 140 60.7
Haze_22879 Corylus avellana HOM05D000924 ORTHO05D001209 1.4e-30 136.7 140 60.7
MBI15_g36602_MAGBIO Magnolia biondii HOM05D000924 ORTHO05D001209 1.4e-30 136.7 138 60.1
CiPaw.07G131100 Carya illinoinensis HOM05D000924 ORTHO05D001209 1.9e-30 136.3 140 60.0
DCAR_003081 Daucus carota HOM05D000924 ORTHO05D001209 1.9e-30 136.3 139 59.7
Hma1.2p1_0914F.1_g236150 Hydrangea macrophylla HOM05D000924 ORTHO05D001209 1.9e-30 136.3 141 59.6
TPR.G25887 Trifolium pratense HOM05D000924 ORTHO05D001209 1.9e-30 136.3 141 59.6
Potri.015G095500 Populus trichocarpa HOM05D000924 ORTHO05D001209 2.4e-30 136.0 140 60.7
TPR.G10336 Trifolium pratense HOM05D000924 ORTHO05D001209 2.4e-30 136.0 141 58.9
Glyma.08G173500 Glycine max HOM05D000924 ORTHO05D001209 3.2e-30 135.6 142 57.7
Actinidia17090 Actinidia chinensis HOM05D000924 ORTHO05D001209 4.2e-30 135.2 142 61.3
Ca_03699_v3 Cicer arietinum L. HOM05D000924 ORTHO05D001209 4.2e-30 135.2 141 58.9
ECA246G0163 Erigeron canadensis HOM05D000924 ORTHO05D001209 4.2e-30 135.2 142 59.9
Prupe.6G358100 Prunus persica HOM05D000924 ORTHO05D001209 4.2e-30 135.2 139 61.9
arahy.Tifrunner.gnm1.ann1.1JT8J9 Arachis hypogaea HOM05D000924 ORTHO05D001209 5.5e-30 134.8 140 60.0
arahy.Tifrunner.gnm1.ann1.JY4JA5 Arachis hypogaea HOM05D000924 ORTHO05D001209 5.5e-30 134.8 140 60.0
COL.COLO4_18725 Corchorus olitorius HOM05D000924 ORTHO05D001209 5.5e-30 134.8 139 62.6
MELO3C006732.2 Cucumis melo HOM05D000924 ORTHO05D001209 5.5e-30 134.8 140 60.0
CsaV3_3G015340 Cucumis sativus L. HOM05D000924 ORTHO05D001209 5.5e-30 134.8 140 60.0
Sabra15G0116500 Salix brachista HOM05D000924 ORTHO05D001209 5.5e-30 134.8 140 60.0
SGA_v2.0_scaffold161G37860 Striga asiatica HOM05D000924 ORTHO05D001209 5.5e-30 134.8 138 60.1
CANSAT80G1721 Cannabis sativa HOM05D000924 ORTHO05D001209 7.1e-30 134.4 141 58.2
Rhsim06G0001600 Rhododendron simsii HOM05D000924 ORTHO05D001209 7.1e-30 134.4 140 60.7
Sc15g0004020 Simmondsia chinensis HOM05D000924 ORTHO05D001209 7.1e-30 134.4 139 63.3
Nn6g31594 Nelumbo nucifera HOM05D000924 ORTHO05D001209 9.3e-30 134.0 141 57.4
MD04G1240400 Malus domestica HOM05D000924 ORTHO05D001209 1.2e-29 133.7 139 59.7
MD12G1257300 Malus domestica HOM05D000924 ORTHO05D001209 1.2e-29 133.7 139 59.7
ClCG05G006710 Citrullus lanatus HOM05D000924 ORTHO05D001209 1.6e-29 133.3 140 60.0
TWI14G0143 Tripterygium wilfordii HOM05D000924 ORTHO05D001209 1.6e-29 133.3 139 61.9
CDE06G2318 Ceratophyllum demersum HOM05D000924 ORTHO05D001209 2.7e-29 132.5 138 56.5
Haze_17095 Corylus avellana HOM05D000924 ORTHO05D001209 2.7e-29 132.5 139 61.2
Dinv32321 Davidia involucrata HOM05D000924 ORTHO05D001209 2.7e-29 132.5 139 59.0
Lj5A314T76 Lonicera japonica HOM05D000924 ORTHO05D001209 3.5e-29 132.1 138 59.4
Sed0004818 Sechium edule HOM05D000924 ORTHO05D001209 4.6e-29 131.7 140 59.3
Glyma.15G253800 Glycine max HOM05D000924 ORTHO05D001209 6.0e-29 131.3 142 57.7
Nitab4.5_0000110g0580 Nicotiana tabacum HOM05D000924 ORTHO05D001209 7.9e-29 131.0 139 59.7
FvH4_5g21940 Fragaria vesca HOM05D000924 ORTHO05D001209 1.0e-28 130.6 139 59.7
FAN08G2720 Fragaria x ananassa HOM05D000924 ORTHO05D001209 1.0e-28 130.6 139 59.7
FAN13G1554 Fragaria x ananassa HOM05D000924 ORTHO05D001209 1.0e-28 130.6 139 59.7
FAN18G2116 Fragaria x ananassa HOM05D000924 ORTHO05D001209 1.0e-28 130.6 139 59.7
CANSAT78G0159 Cannabis sativa HOM05D000924 ORTHO05D001209 1.3e-28 130.2 136 56.6
THA.LOC104812019 Tarenaya hassleriana HOM05D000924 ORTHO05D001209 2.3e-28 129.4 137 57.7
AL1G33990 Arabidopsis lyrata HOM05D000924 ORTHO05D001209 3.0e-28 129.0 139 59.7
Potri.012G097300 Populus trichocarpa HOM05D000924 ORTHO05D001209 3.0e-28 129.0 140 59.3
TAR369G0929 Trochodendron aralioides HOM05D000924 ORTHO05D001209 3.0e-28 129.0 133 54.1
Cc02_g28440 Coffea canephora HOM05D000924 ORTHO05D001209 3.9e-28 128.6 141 61.0
Carub.0001s2043 Capsella rubella HOM05D000924 ORTHO05D001209 5.1e-28 128.3 138 58.7
Nitab4.5_0005694g0030 Nicotiana tabacum HOM05D000924 ORTHO05D001209 5.1e-28 128.3 141 60.3
Nitab4.5_0008569g0010 Nicotiana tabacum HOM05D000924 ORTHO05D001209 5.1e-28 128.3 141 60.3
BcaC06g34852 Brassica carinata HOM05D000924 ORTHO05D001209 1.1e-27 127.1 137 56.9
C07p22650 Brassica napus HOM05D000924 ORTHO05D001209 1.1e-27 127.1 137 56.9
BolC7t42794H Brassica oleracea HOM05D000924 ORTHO05D001209 1.1e-27 127.1 137 56.9
Sopen06g033490 Solanum pennellii HOM05D000924 ORTHO05D001209 1.1e-27 127.1 136 56.6
BraA02t06099Z Brassica rapa HOM05D000924 ORTHO05D001209 1.5e-27 126.7 137 56.2
Phvul.005G055300 Phaseolus vulgaris HOM05D000924 ORTHO05D001209 1.5e-27 126.7 142 55.6
VMungo1080G0748 Vigna mungo HOM05D000924 ORTHO05D001209 1.5e-27 126.7 142 56.3
Ciclev10004124m.g Citrus clementina HOM05D000924 ORTHO05D001209 2.5e-27 125.9 139 54.7
Nitab4.5_0007467g0010 Nicotiana tabacum HOM05D000924 ORTHO05D001209 2.5e-27 125.9 130 58.5
MSTRG.1010 Avicennia marina HOM05D000924 ORTHO05D001209 4.3e-27 125.2 136 56.6
CDE07G1660 Ceratophyllum demersum HOM05D000924 ORTHO05D001209 4.3e-27 125.2 140 56.4
Lsat_1_v5_gn_3_7441 Lactuca sativa HOM05D000924 ORTHO05D001209 4.3e-27 125.2 141 56.7
Lsat_1_v5_gn_3_7501 Lactuca sativa HOM05D000924 ORTHO05D001209 4.3e-27 125.2 141 56.7
Sp1g18660 Schrenkiella parvula HOM05D000924 ORTHO05D001209 4.3e-27 125.2 138 58.7
A07p15350 Brassica napus HOM05D000924 ORTHO05D001209 5.6e-27 124.8 137 56.2
BraA07t29275Z Brassica rapa HOM05D000924 ORTHO05D001209 5.6e-27 124.8 137 56.2
CARHR021420 Cardamine hirsuta HOM05D000924 ORTHO05D001209 7.4e-27 124.4 138 57.2
Migut.N01909 Erythranthe guttata HOM05D000924 ORTHO05D001209 7.4e-27 124.4 138 56.5
Thhalv10006525m.g Eutrema salsugineum HOM05D000924 ORTHO05D001209 7.4e-27 124.4 136 54.4
AT1G20960 Arabidopsis thaliana HOM05D000924 ORTHO05D001209 9.6e-27 124.0 139 58.3
A02p10320 Brassica napus HOM05D000924 ORTHO05D001209 9.6e-27 124.0 137 55.5
Aa31LG7G5140 Aethionema arabicum HOM05D000924 ORTHO05D001209 1.6e-26 123.2 136 53.7
ATR0605G032 Amborella trichopoda HOM05D000924 ORTHO05D001209 2.8e-26 122.5 140 55.0
Aqoxy3G02568 Aquilegia oxysepala HOM05D000924 ORTHO05D001209 2.8e-26 122.5 144 56.2
C02p17050 Brassica napus HOM05D000924 ORTHO05D001209 2.8e-26 122.5 137 55.5
BolC2t07803H Brassica oleracea HOM05D000924 ORTHO05D001209 2.8e-26 122.5 137 55.5
Medtr2g064740 Medicago truncatula HOM05D000924 ORTHO05D001209 2.8e-26 122.5 144 56.9
SHI31129 Sapria himalayana HOM05D000924 ORTHO05D001209 3.7e-26 122.1 140 57.1
QL04p003238 Quercus lobata HOM05D000924 ORTHO05D001209 8.2e-26 120.9 137 55.5
BcaB03g14290 Brassica carinata HOM05D000924 ORTHO05D001209 1.8e-25 119.8 136 52.9
unitig_26.g9847 Utricularia gibba HOM05D000924 ORTHO05D001209 1.8e-25 119.8 126 60.3
SEGI_03458 Sequoiadendron giganteum HOM05D000924 ORTHO05D001209 2.4e-25 119.4 141 53.9
AUR62024846 Chenopodium quinoa HOM05D000924 ORTHO05D001209 4.0e-25 118.6 138 57.2
ClCG05G013070 Citrullus lanatus HOM05D000924 ORTHO05D001209 4.0e-25 118.6 133 54.1
AL5G18660 Arabidopsis lyrata HOM05D000924 ORTHO05D001209 5.3e-25 118.2 139 53.2
AT2G42270 Arabidopsis thaliana HOM05D000924 ORTHO05D001209 5.3e-25 118.2 139 55.4
Carub.0004s2461 Capsella rubella HOM05D000924 ORTHO05D001209 5.3e-25 118.2 141 54.6
SEGI_01233 Sequoiadendron giganteum HOM05D000924 ORTHO05D001209 6.9e-25 117.9 141 53.9
Ciclev10010890m.g Citrus clementina HOM05D000924 ORTHO05D001209 1.2e-24 117.1 142 52.1
Lj3g0017691 Lotus japonicus HOM05D000924 ORTHO05D001209 1.2e-24 117.1 141 52.5
SMO347G0607 Selaginella moellendorffii HOM05D000924 ORTHO05D001209 1.5e-24 116.7 137 50.4
vmacro14714 Vaccinium macrocarpon HOM05D000924 ORTHO05D001209 2.0e-24 116.3 130 54.6
AL4G40630 Arabidopsis lyrata HOM05D000924 ORTHO05D001209 2.6e-24 115.9 140 55.7
Cc05_g03360 Coffea canephora HOM05D000924 ORTHO05D001209 2.6e-24 115.9 132 55.3
Lalb_Chr25g0285181 Lupinus albus HOM05D000924 ORTHO05D001209 2.6e-24 115.9 141 52.5
HanXRQChr17g0533721 Helianthus annuus HOM05D000924 ORTHO05D001209 2.2e-23 112.8 140 53.6
ECA232G3463 Erigeron canadensis HOM05D000924 ORTHO05D001209 6.5e-23 111.3 129 55.8
Pp3c1_35880 Physcomitrium patens HOM05D000924 ORTHO05D001209 6.5e-23 111.3 142 50.7
Zm00001eb328850 Zea mays HOM05D000924 ORTHO05D001209 6.5e-23 111.3 146 45.9
BcaB03g11743 Brassica carinata HOM05D000924 ORTHO05D001209 8.4e-23 110.9 132 54.5
Aa31LG6G12910 Aethionema arabicum HOM05D000924 ORTHO05D001209 2.5e-22 109.4 136 51.5
CARHR137320 Cardamine hirsuta HOM05D000924 ORTHO05D001209 3.2e-22 109.0 138 51.4
CBR_g70690 Chara braunii HOM05D000924 ORTHO05D001209 5.5e-22 108.2 142 47.9
Mapoly0043s0081 Marchantia polymorpha HOM05D000924 ORTHO05D001209 1.2e-21 107.1 143 49.0
Medtr4g011450 Medicago truncatula HOM05D000924 ORTHO05D001209 2.7e-21 105.9 147 46.9
BraA08t33566Z Brassica rapa HOM05D000924 ORTHO05D001209 7.9e-21 104.4 138 48.6
PSO782G5199 Papaver somniferum HOM05D000924 ORTHO05D001209 1.0e-20 104.0 144 48.6
FAN09G1765 Fragaria x ananassa HOM05D000924 ORTHO05D001209 1.8e-20 103.2 133 50.4
FAN09G2563 Fragaria x ananassa HOM05D000924 ORTHO05D001209 1.8e-20 103.2 134 50.0
AUR62024847 Chenopodium quinoa HOM05D000924 ORTHO05D001209 3.0e-20 102.4 133 51.9
PSO063G7524 Papaver somniferum HOM05D000924 ORTHO05D001209 3.9e-20 102.1 144 47.9
FvH4_6g00860 Fragaria vesca HOM05D000924 ORTHO05D001209 8.7e-20 100.9 136 49.3
FAN05G2437 Fragaria x ananassa HOM05D000924 ORTHO05D001209 8.7e-20 100.9 133 49.6
BolC3t15183H Brassica oleracea HOM05D000924 ORTHO05D001209 1.1e-19 100.5 131 51.1
FAN14G0455 Fragaria x ananassa HOM05D000924 ORTHO05D001209 1.1e-19 100.5 133 49.6
C03p28130 Brassica napus HOM05D000924 ORTHO05D001209 1.9e-19 99.8 131 51.1
FAN05G4579 Fragaria x ananassa HOM05D000924 ORTHO05D001209 1.9e-19 99.8 134 49.3
Os02g0106966 Oryza sativa ssp. japonica HOM05D000924 ORTHO05D001209 1.9e-19 99.8 142 45.1
FvH4_6g47191 Fragaria vesca HOM05D000924 ORTHO05D001209 5.7e-19 98.2 150 46.7
FAN14G3354 Fragaria x ananassa HOM05D000924 ORTHO05D001209 1.3e-18 97.1 150 46.0
Nitab4.5_0003918g0050 Nicotiana tabacum HOM05D000924 ORTHO05D001209 4.8e-18 95.1 137 51.1
BcaC01g05308 Brassica carinata HOM05D000924 ORTHO05D001209 8.2e-18 94.4 132 47.0
RcHm_v2.0_Chr2g0166221 Rosa chinensis HOM05D000924 ORTHO05D001209 1.1e-17 94.0 119 51.3
Os03g0743800 Oryza sativa ssp. japonica HOM05D000924 ORTHO05D001209 1.4e-17 93.6 143 42.7
QL10p013857 Quercus lobata HOM05D000924 ORTHO05D001209 1.8e-17 93.2 209 37.8
MD09G1063000 Malus domestica HOM05D000924 ORTHO05D001209 6.9e-17 91.3 141 46.8
Nitab4.5_0026257g0010 Nicotiana tabacum HOM05D000924 ORTHO05D001209 6.9e-17 91.3 90 57.8
FAN13G2240 Fragaria x ananassa HOM05D000924 ORTHO05D001209 9.0e-17 90.9 133 48.9
HanXRQChr12g0359471 Helianthus annuus HOM05D000924 ORTHO05D001209 9.0e-17 90.9 87 58.6
AUR62032373 Chenopodium quinoa HOM05D000924 ORTHO05D001209 2.6e-16 89.4 101 59.4
ClCG11G018370 Citrullus lanatus HOM05D000924 ORTHO05D001209 1.3e-15 87.0 83 66.3
BolC2t09659H Brassica oleracea HOM05D000924 ORTHO05D001209 1.1e-14 84.0 124 43.5
Nitab4.5_0004689g0010 Nicotiana tabacum HOM05D000924 ORTHO05D012842 1.9e-14 83.2 102 55.9
Nitab4.5_0004801g0020 Nicotiana tabacum HOM05D000924 ORTHO05D001209 3.2e-14 82.4 66 66.7
BcaC03g15896 Brassica carinata HOM05D000924 ORTHO05D001209 1.6e-13 80.1 124 41.9
RcHm_v2.0_Chr3g0448351 Rosa chinensis HOM05D000924 ORTHO05D001209 1.6e-13 80.1 84 60.7
BcaC05g26004 Brassica carinata HOM05D000924 ORTHO05D001209 4.6e-13 78.6 132 41.7
A02p22840 Brassica napus HOM05D000924 ORTHO05D001209 4.6e-13 78.6 120 42.5
C05p19630 Brassica napus HOM05D000924 ORTHO05D028009 4.6e-13 78.6 132 41.7
TWI36G0693 Tripterygium wilfordii HOM05D000924 ORTHO05D001209 7.9e-13 77.8 140 45.0
Cre17.g744147 Chlamydomonas reinhardtii HOM05D000924 ORTHO05D001209 8.8e-12 74.3 129 38.0
Lsat_1_v5_gn_4_157361 Lactuca sativa HOM05D000924 ORTHO05D001209 1.7e-10 70.1 87 55.2
Nitab4.5_0001515g0080 Nicotiana tabacum HOM05D000924 ORTHO05D001209 1.4e-09 67.0 70 58.6
BcaB05g25201 Brassica carinata HOM05D000924 ORTHO05D001209 1.2e-08 63.9 63 61.9
Oeu015891.1 Olea europaea HOM05D000924 ORTHO05D010685 1.2e-08 63.9 71 59.2
Thhalv10016123m.g Eutrema salsugineum HOM05D000924 ORTHO05D001209 2.0e-08 63.2 56 66.1
MCO02G020 Micromonas commoda HOM05D000924 ORTHO05D001209 4.5e-08 62.0 76 44.7
SalBow7G0960 Salvia bowleyana HOM05D008298 ORTHO05D010685 7.7e-08 61.2 86 48.8
Psat1g002360 Pisum sativum HOM05D000924 ORTHO05D001209 1.0e-07 60.8 85 49.4
CSS0020846 Camellia sinensis var. sinensis HOM05D000924 ORTHO05D001209 1.3e-07 60.5 87 51.7
HPP92_014733 Vanilla planifolia HOM05D000924 ORTHO05D001209 1.7e-07 60.1 71 50.7
C02p36640 Brassica napus HOM05D000924 ORTHO05D001209 1.9e-06 56.6 93 38.7
TPR.G10348 Trifolium pratense HOM05D000924 ORTHO05D001209 1.9e-06 56.6 81 43.2
Aqoxy2G02810 Aquilegia oxysepala HOM05D000924 ORTHO05D001209 7.2e-06 54.7 77 40.3
Oeu060274.1 Olea europaea HOM05D000924 ORTHO05D001209 9.4e-06 54.3 48 68.8


User provided reference genes

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