Gene: CSS0036316

General Information

Structural Information

  • Species Camellia sinensis var. sinensis
  • Gene Identifier CSS0036316
  • Transcript Identifier CSS0036316.1
  • Gene Type Coding gene
  • Location Chr6 : 143127794-143136806 : negative

Gene Family Information

  • ID HOM05D000924
  • #Genes/#Species 651/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid CSS0036316.1

Descriptions

  • Description PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase [Vitis vinifera]
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010228
ISO
PLAZA Integrative Orthologyvegetative to reproductive phase transition of meristem AT1G20960
GO:0006397
ISO
PLAZA Integrative OrthologymRNA processing AT1G20960

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005524
IEA
InterProATP binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G20960

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT2G42270
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G20960
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT1G20960

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR041094 Brr2, N-terminal helicase PWI domain
IPR004179 Sec63 domain
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR036390 Winged helix DNA-binding domain superfamily
IPR003593 AAA+ ATPase domain
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR014756 Immunoglobulin E-set
IPR001650 Helicase, C-terminal
IPR011545 DEAD/DEAH box helicase domain
IPR035892 C2 domain superfamily
Mapman id Description
16.2.7.1.4 RNA processing.pre-mRNA splicing.spliceosome assembly and disassembly.RNA helicase activities.RNA helicase (Brr2)