Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen03g022800 Solanum pennellii HOM05D005626 ORTHO05D007372 4.9e-273 944.1 569 100.0
Solyc03g082990.3 Solanum lycopersicum HOM05D005626 ORTHO05D007372 2.4e-267 925.2 569 98.6
Nitab4.5_0005491g0050 Nicotiana tabacum HOM05D005626 ORTHO05D007372 6.3e-220 767.7 578 83.7
CAN.G481.28 Capsicum annuum HOM05D005626 ORTHO05D007372 2.5e-216 755.7 570 83.0
Peaxi162Scf00740g00226 Petunia axillaris HOM05D005626 ORTHO05D007372 8.9e-182 641.0 484 84.9
Cc02_g01370 Coffea canephora HOM05D005626 ORTHO05D007372 1.0e-145 521.2 545 60.7
Migut.F00199 Erythranthe guttata HOM05D005626 ORTHO05D007372 8.4e-140 501.5 527 62.2
Atru.chr12.2245_Atru.chr12.2244 Acer truncatum HOM05D005626 ORTHO05D007372 4.3e-136 489.2 490 65.7
Oeu010695.1 Olea europaea HOM05D005626 ORTHO05D007372 9.3e-131 471.5 536 62.1
Manes.06G012351 Manihot esculenta HOM05D005626 ORTHO05D007372 8.7e-129 464.9 577 54.6
Dinv29256 Davidia involucrata HOM05D005626 ORTHO05D007372 5.1e-121 439.1 586 58.4
CANSAT21G0821 Cannabis sativa HOM05D005626 ORTHO05D007372 3.4e-117 426.4 495 55.6
MBI07_g24765_MAGBIO Magnolia biondii HOM05D005626 ORTHO05D007372 6.5e-116 422.2 557 48.1
SalBow4G1489 Salvia bowleyana HOM05D005626 ORTHO05D007372 1.7e-108 397.5 427 59.3
EL10Ac3g05260 Beta vulgaris HOM05D005626 ORTHO05D007372 1.1e-107 394.8 523 53.0
Sabra15G0008900 Salix brachista HOM05D005626 ORTHO05D007372 1.9e-107 394.0 498 58.8
CSS0044766 Camellia sinensis var. sinensis HOM05D005626 ORTHO05D007372 3.2e-107 393.3 543 56.9
Cfa016215 Carpinus fangiana HOM05D005626 ORTHO05D007372 3.2e-107 393.3 579 49.4
unitig_92.g28249 Utricularia gibba HOM05D005626 ORTHO05D007372 4.7e-106 389.4 480 54.2
Potri.015G010800 Populus trichocarpa HOM05D005626 ORTHO05D007372 1.0e-105 388.3 581 52.5
Eucgr.A01448 Eucalyptus grandis HOM05D005626 ORTHO05D007372 5.2e-105 386.0 503 53.1
Actinidia18659 Actinidia chinensis HOM05D005626 ORTHO05D007372 6.7e-105 385.6 586 50.2
MSTRG.27018 Avicennia marina HOM05D005626 ORTHO05D007372 1.1e-104 384.8 455 58.9
CDE02G3804 Ceratophyllum demersum HOM05D005626 ORTHO05D007372 1.1e-104 384.8 463 55.5
GSVIVG01038569001 Vitis vinifera HOM05D005626 ORTHO05D007372 2.0e-104 384.0 468 53.2
QL09p007984 Quercus lobata HOM05D005626 ORTHO05D007372 4.8e-103 379.4 471 59.0
arahy.Tifrunner.gnm1.ann1.1DU7LF Arachis hypogaea HOM05D005626 ORTHO05D007372 7.7e-101 372.1 490 50.6
Gohir.D09G179900 Gossypium hirsutum HOM05D005626 ORTHO05D007372 1.0e-100 371.7 486 54.5
AUR62006074 Chenopodium quinoa HOM05D005626 ORTHO05D007372 1.3e-100 371.3 568 49.3
PGR042G1168 Punica granatum HOM05D005626 ORTHO05D007372 5.5e-99 365.9 548 53.5
Thecc.03G201200 Theobroma cacao HOM05D005626 ORTHO05D007372 9.4e-99 365.2 496 54.0
Prupe.2G313200 Prunus persica HOM05D005626 ORTHO05D007372 1.2e-98 364.8 524 48.9
Gorai.006G201900 Gossypium raimondii HOM05D005626 ORTHO05D007372 8.0e-98 362.1 518 47.7
THA.LOC104799967 Tarenaya hassleriana HOM05D005626 ORTHO05D007372 1.0e-97 361.7 506 48.6
TPR.G33639 Trifolium pratense HOM05D005626 ORTHO05D007372 1.0e-97 361.7 531 53.7
PGSC0003DMG400018528 Solanum tuberosum HOM05D005626 ORTHO05D007372 2.3e-97 360.5 211 98.1
CSS0003989 Camellia sinensis var. sinensis HOM05D005626 ORTHO05D007372 4.0e-97 359.8 649 42.5
arahy.Tifrunner.gnm1.ann1.ULB6CG Arachis hypogaea HOM05D005626 ORTHO05D007372 4.4e-96 356.3 490 47.6
Lj8A623T21 Lonicera japonica HOM05D005626 ORTHO05D007372 1.3e-95 354.8 466 57.9
Ciclev10020013m.g Citrus clementina HOM05D005626 ORTHO05D007372 1.7e-95 354.4 468 55.3
FAN06G4319 Fragaria x ananassa HOM05D005626 ORTHO05D007372 4.1e-94 349.7 504 54.2
TAR375G0360 Trochodendron aralioides HOM05D005626 ORTHO05D007372 4.1e-94 349.7 589 47.7
Manes.06G011400 Manihot esculenta HOM05D005626 ORTHO05D007372 5.3e-94 349.4 454 54.4
FvH4_7g31990 Fragaria vesca HOM05D005626 ORTHO05D007372 7.0e-94 349.0 504 54.2
Hund11648 Selenicereus undatus HOM05D005626 ORTHO05D007372 9.1e-94 348.6 489 51.3
Hma1.2p1_2307F.1_g319430 Hydrangea macrophylla HOM05D005626 ORTHO05D007372 2.0e-93 347.4 556 51.8
ClCG01G000360 Citrullus lanatus HOM05D005626 ORTHO05D007372 4.5e-93 346.3 475 56.4
Lj1g0019302 Lotus japonicus HOM05D005626 ORTHO05D007372 5.9e-93 345.9 520 49.6
TWI39G0896 Tripterygium wilfordii HOM05D005626 ORTHO05D007372 1.7e-92 344.4 497 55.3
AUR62035551 Chenopodium quinoa HOM05D005626 ORTHO05D007372 2.2e-92 344.0 582 44.5
FAN10G2571 Fragaria x ananassa HOM05D005626 ORTHO05D007372 2.2e-92 344.0 511 53.6
Hma1.2p1_0591F.1_g185250 Hydrangea macrophylla HOM05D005626 ORTHO05D007372 6.5e-92 342.4 567 50.3
MD01G1222800 Malus domestica HOM05D005626 ORTHO05D007372 6.5e-92 342.4 578 47.6
CsaV3_5G000430 Cucumis sativus L. HOM05D005626 ORTHO05D007372 1.1e-91 341.7 574 50.7
Lalb_Chr08g0240121 Lupinus albus HOM05D005626 ORTHO05D007372 1.5e-91 341.3 465 55.7
FAN03G2656 Fragaria x ananassa HOM05D005626 ORTHO05D007032 1.8e-89 334.3 509 48.9
Sc25g0000940 Simmondsia chinensis HOM05D005626 ORTHO05D007372 1.8e-89 334.3 425 55.5
CiPaw.06G045100 Carya illinoinensis HOM05D005626 ORTHO05D007372 2.3e-89 334.0 586 46.6
RcHm_v2.0_Chr1g0381501 Rosa chinensis HOM05D005626 ORTHO05D007372 2.3e-89 334.0 466 55.6
arahy.Tifrunner.gnm1.ann1.DCMH6Q Arachis hypogaea HOM05D005626 ORTHO05D007372 6.8e-89 332.4 455 48.8
MELO3C005892.2 Cucumis melo HOM05D005626 ORTHO05D007372 8.8e-89 332.0 469 55.9
arahy.Tifrunner.gnm1.ann1.CHU3M4 Arachis hypogaea HOM05D005626 ORTHO05D007372 7.5e-88 328.9 468 49.8
PSO063G0511 Papaver somniferum HOM05D005626 ORTHO05D007372 7.5e-88 328.9 463 53.6
QL09p008055 Quercus lobata HOM05D005626 ORTHO05D007372 4.8e-87 326.2 416 45.7
PSO170G4344 Papaver somniferum HOM05D005626 ORTHO05D007372 8.3e-87 325.5 514 52.1
HPP92_005288 Vanilla planifolia HOM05D005626 ORTHO05D007372 4.1e-86 323.2 389 55.5
Ca_16720_v3 Cicer arietinum L. HOM05D005626 ORTHO05D007372 2.0e-85 320.9 530 51.9
CSS0000100 Camellia sinensis var. sinensis HOM05D005626 ORTHO05D007372 3.8e-84 316.6 518 45.4
Haze_00226 Corylus avellana HOM05D005626 ORTHO05D007372 8.6e-84 315.5 437 51.9
MBI07_g43862_MAGBIO Magnolia biondii HOM05D005626 ORTHO05D007372 1.6e-82 311.2 472 41.3
AT5G53080 Arabidopsis thaliana HOM05D005626 ORTHO05D007372 3.6e-82 310.1 507 45.6
Glyma.04G234300 Glycine max HOM05D005626 ORTHO05D007372 3.6e-82 310.1 534 50.2
Nn1g00302 Nelumbo nucifera HOM05D005626 ORTHO05D007372 3.6e-82 310.1 542 46.3
Psat5g076080 Pisum sativum HOM05D005626 ORTHO05D007372 4.7e-82 309.7 572 48.8
Ah.07g205460 Amaranthus hybridus HOM05D005626 ORTHO05D007372 1.4e-81 308.1 600 43.5
Phvul.009G051300 Phaseolus vulgaris HOM05D005626 ORTHO05D007372 6.8e-81 305.8 469 54.6
COL.COLO4_16792 Corchorus olitorius HOM05D005626 ORTHO05D007032 1.5e-80 304.7 469 51.4
Duzib084G0104 Durio zibethinus HOM05D005626 ORTHO05D007372 2.0e-80 304.3 496 49.0
VMungo1309G2515 Vigna mungo HOM05D005626 ORTHO05D007372 5.7e-80 302.8 482 49.2
Sed0007830 Sechium edule HOM05D005626 ORTHO05D007372 7.5e-80 302.4 582 47.8
BcaB05g22010 Brassica carinata HOM05D005626 ORTHO05D007372 5.4e-78 296.2 490 38.6
Lsat_1_v5_gn_9_49841 Lactuca sativa HOM05D005626 ORTHO05D007372 9.2e-78 295.4 538 45.4
Aa31LG3G9390 Aethionema arabicum HOM05D005626 ORTHO05D007372 4.5e-77 293.1 504 45.6
Aqoxy5G04311 Aquilegia oxysepala HOM05D005626 ORTHO05D007372 2.9e-76 290.4 536 43.1
Carub.0008s1328 Capsella rubella HOM05D005626 ORTHO05D007372 6.6e-76 289.3 509 43.4
Sp6g15250 Schrenkiella parvula HOM05D005626 ORTHO05D007372 1.1e-75 288.5 506 45.1
AL8G27710 Arabidopsis lyrata HOM05D005626 ORTHO05D007372 2.5e-75 287.3 506 44.9
Thhalv10013148m.g Eutrema salsugineum HOM05D005626 ORTHO05D007372 9.5e-75 285.4 496 45.8
ECA232G0910 Erigeron canadensis HOM05D005626 ORTHO05D007372 3.6e-74 283.5 532 44.9
Medtr3g091780 Medicago truncatula HOM05D005626 ORTHO05D007372 8.9e-73 278.9 553 47.4
Cpa.g.sc3.101 Carica papaya HOM05D005626 ORTHO05D007372 1.2e-72 278.5 513 44.2
DCAR_010593 Daucus carota HOM05D005626 ORTHO05D007372 1.5e-72 278.1 214 68.2
A02p11310 Brassica napus HOM05D005626 ORTHO05D007372 1.7e-71 274.6 525 43.4
Gohir.A09G185000 Gossypium hirsutum HOM05D005626 ORTHO05D007372 3.7e-71 273.5 297 66.7
BraA02t06193Z Brassica rapa HOM05D005626 ORTHO05D007372 4.9e-71 273.1 470 45.5
SGA_v2.0_scaffold192G40528 Striga asiatica HOM05D005626 ORTHO05D007032 8.3e-71 272.3 433 51.5
BolC2t08014H Brassica oleracea HOM05D005626 ORTHO05D007372 1.9e-70 271.2 506 43.1
C02p18690 Brassica napus HOM05D005626 ORTHO05D007372 3.2e-70 270.4 509 43.6
HanXRQChr15g0485681 Helianthus annuus HOM05D005626 ORTHO05D007372 1.2e-69 268.5 541 46.0
BcaC03g14458 Brassica carinata HOM05D005626 ORTHO05D007372 5.0e-68 263.1 465 45.4
CARHR266100 Cardamine hirsuta HOM05D005626 ORTHO05D007372 6.6e-68 262.7 568 40.5
BcaB05g22007 Brassica carinata HOM05D005626 ORTHO05D007372 1.2e-64 251.9 496 40.3
ATR0730G125 Amborella trichopoda HOM05D005626 ORTHO05D007372 3.5e-61 240.4 344 53.8
Lj1A1021T49 Lonicera japonica HOM05D005626 ORTHO05D007372 3.3e-59 233.8 399 49.1
FAN10G0040 Fragaria x ananassa HOM05D005626 ORTHO05D009683 2.6e-56 224.2 441 43.3
Mapoly0045s0029 Marchantia polymorpha HOM05D005626 ORTHO05D007372 6.6e-44 183.0 360 43.9
Mapoly0001s0084 Marchantia polymorpha HOM05D005626 ORTHO05D007372 4.3e-43 180.3 458 32.3
Manes.06G011750 Manihot esculenta HOM05D005626 ORTHO05D007372 2.6e-40 171.0 203 64.0
Manes.06G012101 Manihot esculenta HOM05D005626 ORTHO05D007372 4.2e-38 163.7 303 47.5
Glyma.06G130267 Glycine max HOM05D005626 ORTHO05D007372 2.5e-35 154.5 109 69.7
MBI19_g14786_MAGBIO Magnolia biondii HOM05D005626 ORTHO05D007372 3.6e-34 150.6 150 51.3
Glyma.06G130333 Glycine max HOM05D005626 ORTHO05D007372 1.1e-33 149.1 129 58.9
Pp3c5_16230 Physcomitrium patens HOM05D005626 ORTHO05D007372 1.4e-30 138.7 333 29.4
QL09p008133 Quercus lobata HOM05D005626 ORTHO05D007372 3.2e-30 137.5 82 82.9
MBI19_g14787_MAGBIO Magnolia biondii HOM05D005626 ORTHO05D007372 1.1e-25 122.5 96 58.3
BcaB01g04215 Brassica carinata HOM05D005626 ORTHO05D007372 5.3e-25 120.2 151 43.7
Pp3c16_9300 Physcomitrium patens HOM05D005626 ORTHO05D007372 5.3e-25 120.2 353 27.5
FAN10G4199 Fragaria x ananassa HOM05D005626 ORTHO05D007372 7.9e-21 106.3 121 65.3
BcaB01g04214 Brassica carinata HOM05D005626 ORTHO05D007372 1.0e-20 105.9 154 43.5
Pp3c5_16240 Physcomitrium patens HOM05D005626 ORTHO05D007372 2.3e-20 104.8 364 37.6
CSS0006573 Camellia sinensis var. sinensis HOM05D005626 ORTHO05D007372 1.9e-19 101.7 85 61.2
MD07G1293400 Malus domestica HOM05D005626 ORTHO05D007372 2.1e-18 98.2 121 48.8
AagrBONN_evm.TU.Sc2ySwM_369.443 Anthoceros agrestis HOM05D005626 ORTHO05D007372 7.6e-16 89.7 173 33.5
Pp3c23_14930 Physcomitrium patens HOM05D005626 ORTHO05D007372 1.8e-12 78.6 152 33.6
Lj1C1019T10 Lonicera japonica HOM05D005626 ORTHO05D007372 1.9e-11 75.1 84 47.6
Actinidia06140 Actinidia chinensis HOM05D005626 ORTHO05D007372 3.3e-11 74.3 60 58.3
SEGI_36936 Sequoiadendron giganteum HOM05D005626 ORTHO05D007372 1.3e-10 72.4 70 50.0
Cfa019813 Carpinus fangiana HOM05D005626 ORTHO05D007372 1.6e-10 72.0 62 58.1
Pp3c8_12740 Physcomitrium patens HOM05D005626 ORTHO05D007372 1.6e-10 72.0 142 28.9
QL09p008114 Quercus lobata HOM05D005626 ORTHO05D007372 4.8e-10 70.5 118 40.7
MD07G1293500 Malus domestica HOM05D005626 ORTHO05D007372 3.4e-08 64.3 56 57.1
Peaxi162Scf00740g00238 Petunia axillaris HOM05D005626 ORTHO05D306929 4.2e-06 57.4 112 41.1


User provided reference genes

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