Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g076320.2 Solanum lycopersicum HOM05D006209 ORTHO05D007645 4.0e-78 294.7 147 100.0
Sopen12g027590 Solanum pennellii HOM05D006209 ORTHO05D007645 9.0e-70 266.9 139 96.4
CAN.G648.11 Capsicum annuum HOM05D006209 ORTHO05D007645 1.0e-57 226.9 137 83.9
Nitab4.5_0000025g0360 Nicotiana tabacum HOM05D006209 ORTHO05D007645 2.5e-56 222.2 139 82.7
Nitab4.5_0001566g0050 Nicotiana tabacum HOM05D006209 ORTHO05D007645 7.4e-56 220.7 139 82.0
Peaxi162Scf00801g00216 Petunia axillaris HOM05D006209 ORTHO05D007645 6.9e-54 214.2 135 81.5
Dinv38524 Davidia involucrata HOM05D006209 ORTHO05D007645 1.9e-51 206.1 139 75.5
CSS0022134 Camellia sinensis var. sinensis HOM05D006209 ORTHO05D007645 3.6e-50 201.8 139 74.1
Oeu040860.1 Olea europaea HOM05D006209 ORTHO05D007645 3.0e-49 198.7 149 71.8
Rhsim08G0178000 Rhododendron simsii HOM05D006209 ORTHO05D007645 3.0e-49 198.7 139 72.7
vmacro19294 Vaccinium macrocarpon HOM05D006209 ORTHO05D007645 4.4e-48 194.9 139 72.7
Thecc.03G026100 Theobroma cacao HOM05D006209 ORTHO05D007645 5.7e-48 194.5 139 69.1
Hma1.2p1_0046F.1_g027160 Hydrangea macrophylla HOM05D006209 ORTHO05D007645 3.7e-47 191.8 136 74.3
SalBow5G2378 Salvia bowleyana HOM05D006209 ORTHO05D007645 4.8e-47 191.4 141 68.8
Ciclev10020078m.g Citrus clementina HOM05D006209 ORTHO05D007645 6.3e-47 191.0 139 69.1
FAN13G2576 Fragaria x ananassa HOM05D006209 ORTHO05D007645 6.3e-47 191.0 139 69.1
Sabra15G0107900 Salix brachista HOM05D006209 ORTHO05D007645 6.3e-47 191.0 138 71.7
Prupe.5G165300 Prunus persica HOM05D006209 ORTHO05D007645 1.1e-46 190.3 139 69.1
RcHm_v2.0_Chr7g0192541 Rosa chinensis HOM05D006209 ORTHO05D007645 1.1e-46 190.3 139 69.8
FAN08G2144 Fragaria x ananassa HOM05D006209 ORTHO05D007645 1.8e-46 189.5 139 69.1
QL10p006868 Quercus lobata HOM05D006209 ORTHO05D007645 1.8e-46 189.5 138 70.3
SalBow5G0732 Salvia bowleyana HOM05D006209 ORTHO05D007645 1.8e-46 189.5 141 68.1
Cfa019222 Carpinus fangiana HOM05D006209 ORTHO05D007645 2.4e-46 189.1 140 67.1
COL.COLO4_36757 Corchorus olitorius HOM05D006209 ORTHO05D007645 2.4e-46 189.1 139 68.3
Migut.O00160 Erythranthe guttata HOM05D006209 ORTHO05D007645 2.4e-46 189.1 141 69.5
TAR371G0588 Trochodendron aralioides HOM05D006209 ORTHO05D007645 4.1e-46 188.3 136 70.6
Glyma.04G188400 Glycine max HOM05D006209 ORTHO05D007645 5.3e-46 188.0 139 69.1
Potri.012G086400 Populus trichocarpa HOM05D006209 ORTHO05D007645 5.3e-46 188.0 138 69.6
Glyma.06G177400 Glycine max HOM05D006209 ORTHO05D007645 7.0e-46 187.6 139 69.1
Medtr3g076930 Medicago truncatula HOM05D006209 ORTHO05D007645 9.1e-46 187.2 139 68.3
CDE09G0716 Ceratophyllum demersum HOM05D006209 ORTHO05D007645 1.5e-45 186.4 136 67.6
Ca_30305_v3 Cicer arietinum L. HOM05D006209 ORTHO05D007645 1.5e-45 186.4 139 69.1
FAN18G2337 Fragaria x ananassa HOM05D006209 ORTHO05D007645 2.0e-45 186.0 139 67.6
MD06G1165600 Malus domestica HOM05D006209 ORTHO05D007645 2.0e-45 186.0 139 69.1
Cpa.g.sc159.17 Carica papaya HOM05D006209 ORTHO05D007645 2.6e-45 185.7 139 66.9
Potri.015G084900 Populus trichocarpa HOM05D006209 ORTHO05D007645 2.6e-45 185.7 138 69.6
CANSAT80G1924 Cannabis sativa HOM05D006209 ORTHO05D007645 3.4e-45 185.3 139 66.2
MD14G1171200 Malus domestica HOM05D006209 ORTHO05D007645 3.4e-45 185.3 139 68.3
Phvul.009G173800 Phaseolus vulgaris HOM05D006209 ORTHO05D007645 3.4e-45 185.3 138 68.1
MSTRG.11496 Avicennia marina HOM05D006209 ORTHO05D007645 4.5e-45 184.9 141 68.1
Psat5g118240 Pisum sativum HOM05D006209 ORTHO05D007645 4.5e-45 184.9 139 69.1
Gohir.D03G109100 Gossypium hirsutum HOM05D006209 ORTHO05D007645 5.9e-45 184.5 139 66.9
Gorai.003G115100 Gossypium raimondii HOM05D006209 ORTHO05D007645 5.9e-45 184.5 139 66.9
TWI14G0288 Tripterygium wilfordii HOM05D006209 ORTHO05D007645 7.7e-45 184.1 141 66.7
VMungo1309G1487 Vigna mungo HOM05D006209 ORTHO05D007645 7.7e-45 184.1 139 67.6
DCAR_021592 Daucus carota HOM05D006209 ORTHO05D007645 2.9e-44 182.2 142 70.4
GSVIVG01007643001 Vitis vinifera HOM05D006209 ORTHO05D007645 3.8e-44 181.8 132 72.0
Lj5C130T5 Lonicera japonica HOM05D006209 ORTHO05D007645 6.5e-44 181.0 139 67.6
CiPaw.11G019400 Carya illinoinensis HOM05D006209 ORTHO05D007645 8.5e-44 180.6 139 67.6
ECA232G4716 Erigeron canadensis HOM05D006209 ORTHO05D007645 8.5e-44 180.6 139 66.2
arahy.Tifrunner.gnm1.ann1.5EQE0P Arachis hypogaea HOM05D006209 ORTHO05D007645 1.1e-43 180.3 139 67.6
Gohir.A03G057200 Gossypium hirsutum HOM05D006209 ORTHO05D007645 1.1e-43 180.3 139 66.2
Haze_07590 Corylus avellana HOM05D006209 ORTHO05D007645 1.9e-43 179.5 140 66.4
arahy.Tifrunner.gnm1.ann1.S747I7 Arachis hypogaea HOM05D006209 ORTHO05D007645 3.2e-43 178.7 139 67.6
Sc12g0004970 Simmondsia chinensis HOM05D006209 ORTHO05D007645 5.5e-43 177.9 139 66.2
TPR.G25676 Trifolium pratense HOM05D006209 ORTHO05D007645 5.5e-43 177.9 139 66.2
Aqoxy5G03742 Aquilegia oxysepala HOM05D006209 ORTHO05D007645 9.4e-43 177.2 136 64.7
Cc04_g11480 Coffea canephora HOM05D006209 ORTHO05D007645 1.2e-42 176.8 142 66.2
SGA_v2.0_scaffold25G10798 Striga asiatica HOM05D006209 ORTHO05D007645 2.1e-42 176.0 139 65.5
Nn4g22589 Nelumbo nucifera HOM05D006209 ORTHO05D007645 4.7e-42 174.9 136 65.4
CsaV3_1G008850 Cucumis sativus L. HOM05D006209 ORTHO05D007645 6.1e-42 174.5 140 65.7
HanXRQChr10g0296031 Helianthus annuus HOM05D006209 ORTHO05D007645 8.0e-42 174.1 139 64.0
PSO063G1215 Papaver somniferum HOM05D006209 ORTHO05D007645 1.8e-41 172.9 136 64.7
MELO3C002299.2 Cucumis melo HOM05D006209 ORTHO05D007645 2.3e-41 172.6 140 65.7
Lalb_Chr23g0273351 Lupinus albus HOM05D006209 ORTHO05D007645 2.3e-41 172.6 139 66.2
PSO357G0693 Papaver somniferum HOM05D006209 ORTHO05D007645 8.8e-41 170.6 136 63.2
THA.LOC104800398 Tarenaya hassleriana HOM05D006209 ORTHO05D007645 1.5e-40 169.9 139 62.6
THA.LOC104824986 Tarenaya hassleriana HOM05D006209 ORTHO05D007645 1.5e-40 169.9 139 62.6
MBI06_g16065_MAGBIO Magnolia biondii HOM05D006209 ORTHO05D007645 2.0e-40 169.5 141 66.0
PSO063G4271 Papaver somniferum HOM05D006209 ORTHO05D007645 2.0e-40 169.5 136 63.2
Sp7g22690 Schrenkiella parvula HOM05D006209 ORTHO05D007645 3.3e-40 168.7 139 61.2
PSO754G0074 Papaver somniferum HOM05D006209 ORTHO05D007645 4.4e-40 168.3 136 63.2
CARHR232090 Cardamine hirsuta HOM05D006209 ORTHO05D007645 9.7e-40 167.2 139 60.4
EL10Ac5g10654 Beta vulgaris HOM05D006209 ORTHO05D007645 1.3e-39 166.8 139 64.0
Carub.0007s1635 Capsella rubella HOM05D006209 ORTHO05D007645 1.7e-39 166.4 139 59.7
AUR62028724 Chenopodium quinoa HOM05D006209 ORTHO05D007645 2.2e-39 166.0 135 64.4
SHI17264 Sapria himalayana HOM05D006209 ORTHO05D007645 2.2e-39 166.0 139 59.7
Ah.11g051190 Amaranthus hybridus HOM05D006209 ORTHO05D007645 2.8e-39 165.6 149 61.1
ClCG03G003010 Citrullus lanatus HOM05D006209 ORTHO05D007645 2.8e-39 165.6 140 63.6
PGR083G0853 Punica granatum HOM05D006209 ORTHO05D007645 2.8e-39 165.6 139 64.0
Thhalv10025089m.g Eutrema salsugineum HOM05D006209 ORTHO05D007645 4.8e-39 164.9 139 60.4
Sed0008195 Sechium edule HOM05D006209 ORTHO05D007645 6.3e-39 164.5 140 62.9
BraA01t01539Z Brassica rapa HOM05D006209 ORTHO05D007645 1.8e-38 162.9 139 59.7
Lsat_1_v5_gn_4_77340 Lactuca sativa HOM05D006209 ORTHO05D007645 1.8e-38 162.9 140 62.9
PSO357G0046 Papaver somniferum HOM05D006209 ORTHO05D007645 1.8e-38 162.9 136 61.8
Hund02788 Selenicereus undatus HOM05D006209 ORTHO05D007645 2.4e-38 162.5 139 63.3
AUR62008142 Chenopodium quinoa HOM05D006209 ORTHO05D007645 5.3e-38 161.4 135 63.0
ATR0824G215 Amborella trichopoda HOM05D006209 ORTHO05D007645 7.0e-38 161.0 139 56.8
BcaNung07359 Brassica carinata HOM05D006209 ORTHO05D007645 9.1e-38 160.6 139 59.0
HPP92_008121 Vanilla planifolia HOM05D006209 ORTHO05D007645 9.1e-38 160.6 136 61.8
BcaC09g50838 Brassica carinata HOM05D006209 ORTHO05D007645 1.2e-37 160.2 139 59.0
BolC1t01930H Brassica oleracea HOM05D006209 ORTHO05D007645 2.6e-37 159.1 131 60.3
Aa31LG4G9900 Aethionema arabicum HOM05D006209 ORTHO05D007645 3.5e-37 158.7 135 60.7
A01p16040 Brassica napus HOM05D006209 ORTHO05D007645 3.5e-37 158.7 135 59.3
HPP92_008110 Vanilla planifolia HOM05D006209 ORTHO05D007645 7.7e-37 157.5 136 61.0
C01p20030 Brassica napus HOM05D006209 ORTHO05D007645 1.7e-36 156.4 135 58.5
Eucgr.B00217 Eucalyptus grandis HOM05D006209 ORTHO05D007645 3.8e-36 155.2 139 56.1
Zm00001eb424890 Zea mays HOM05D006209 ORTHO05D007645 1.5e-35 153.3 132 58.3
unitig_26.g8808 Utricularia gibba HOM05D000111 ORTHO05D007645 4.1e-30 135.2 126 58.7
SMO340G0102 Selaginella moellendorffii HOM05D003563 ORTHO05D005325 9.4e-27 124.0 141 50.4
Mapoly0084s0055 Marchantia polymorpha HOM05D006209 ORTHO05D007645 1.8e-25 119.8 140 47.9
Ca_16128_v3 Cicer arietinum L. HOM05D006209 ORTHO05D007645 4.0e-25 118.6 100 62.0
PSO700G0237 Papaver somniferum HOM05D006209 ORTHO05D007645 4.0e-25 118.6 99 62.6
FvH4_5g06320 Fragaria vesca HOM05D006209 ORTHO05D007645 5.7e-24 114.8 92 64.1
PSO063G5100 Papaver somniferum HOM05D006209 ORTHO05D007645 4.1e-22 108.6 93 61.3
Os04g0479000 Oryza sativa ssp. japonica HOM05D006209 ORTHO05D007645 1.3e-15 87.0 54 77.8
Cre02.g117150 Chlamydomonas reinhardtii HOM05D006209 ORTHO05D007645 9.2e-14 80.9 181 33.1
MCO05G067 Micromonas commoda HOM05D006209 ORTHO05D007645 5.9e-13 78.2 135 37.0
CBR_g39421 Chara braunii HOM05D006209 ORTHO05D007645 3.3e-11 72.4 45 71.1
BcaC06g32866 Brassica carinata HOM05D006209 ORTHO05D007645 7.3e-11 71.2 50 68.0
PSO782G2571 Papaver somniferum HOM05D006209 ORTHO05D007645 9.5e-11 70.9 40 80.0
PRCOL_00006353 Prasinoderma coloniale HOM05D006209 ORTHO05D007645 7.5e-08 61.2 128 35.2


User provided reference genes

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