Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc12g035950.1 Solanum lycopersicum HOM05D000216 ORTHO05D001131 2.2e-23 111.3 52 100.0
Migut.H02461 Erythranthe guttata HOM05D000216 ORTHO05D001131 1.5e-14 82.0 51 78.4
Potri.013G142232 Populus trichocarpa HOM05D000216 ORTHO05D001131 7.2e-14 79.7 51 76.5
PGR111G0080 Punica granatum HOM05D000216 ORTHO05D001131 7.2e-14 79.7 51 76.5
SabraPtG0001100 Salix brachista HOM05D000216 ORTHO05D001131 7.2e-14 79.7 51 76.5
AL2G20930 Arabidopsis lyrata HOM05D000216 ORTHO05D001131 9.4e-14 79.3 51 76.5
ATCG00190 Arabidopsis thaliana HOM05D000216 ORTHO05D001131 9.4e-14 79.3 51 76.5
CAN.G1738.7 Capsicum annuum HOM05D000216 ORTHO05D001131 9.4e-14 79.3 51 76.5
CAN.G219.20 Capsicum annuum HOM05D000216 ORTHO05D001131 9.4e-14 79.3 51 76.5
CAN.G892.2 Capsicum annuum HOM05D000216 ORTHO05D001131 9.4e-14 79.3 51 76.5
CAN.G939.17 Capsicum annuum HOM05D000216 ORTHO05D001131 9.4e-14 79.3 51 76.5
CARHR281930 Cardamine hirsuta HOM05D000216 ORTHO05D001131 9.4e-14 79.3 51 76.5
DCAR_032476 Daucus carota HOM05D000216 ORTHO05D001131 9.4e-14 79.3 51 76.5
Gohir.D01G029500 Gossypium hirsutum HOM05D000216 ORTHO05D001131 9.4e-14 79.3 51 76.5
Lalb_Chr09g0335411 Lupinus albus HOM05D000216 ORTHO05D001131 9.4e-14 79.3 51 76.5
Nn082s42674 Nelumbo nucifera HOM05D000216 ORTHO05D001131 9.4e-14 79.3 51 76.5
Peaxi162Scf00608g00014 Petunia axillaris HOM05D000216 ORTHO05D001131 9.4e-14 79.3 51 76.5
BNapus_Darmor_BZH_scaffold_253p00080 Brassica napus HOM05D000216 ORTHO05D001131 1.2e-13 79.0 51 74.5
C04p22650 Brassica napus HOM05D000216 ORTHO05D001131 1.2e-13 79.0 51 74.5
BolSC37t60764H Brassica oleracea HOM05D000216 ORTHO05D001131 1.2e-13 79.0 51 74.5
BolSC45t60940H Brassica oleracea HOM05D000216 ORTHO05D001131 1.2e-13 79.0 51 74.5
BolSC49t61196H Brassica oleracea HOM05D000216 ORTHO05D001131 1.2e-13 79.0 51 74.5
BraSC140t45600Z Brassica rapa HOM05D000216 ORTHO05D001131 1.2e-13 79.0 51 74.5
BraSC140t45606Z Brassica rapa HOM05D000216 ORTHO05D001131 1.2e-13 79.0 51 74.5
BraSC151t45705Z Brassica rapa HOM05D000216 ORTHO05D001131 1.2e-13 79.0 51 74.5
BraSC58t46479Z Brassica rapa HOM05D000216 ORTHO05D001131 1.2e-13 79.0 51 74.5
BolSC45t60873H Brassica oleracea HOM05D000216 ORTHO05D001131 3.6e-13 77.4 51 72.5
Ah.01g011550 Amaranthus hybridus HOM05D000216 ORTHO05D001131 4.7e-13 77.0 51 74.5
Ah.09g227320 Amaranthus hybridus HOM05D000216 ORTHO05D001131 4.7e-13 77.0 51 74.5
Ah.10g027590 Amaranthus hybridus HOM05D000216 ORTHO05D001131 4.7e-13 77.0 51 74.5
EL10As12g24016 Beta vulgaris HOM05D000216 ORTHO05D001131 4.7e-13 77.0 51 74.5
EL10As4g23395 Beta vulgaris HOM05D000216 ORTHO05D001131 4.7e-13 77.0 51 74.5
LjContig00318g0016482 Lotus japonicus HOM05D000216 ORTHO05D001131 4.7e-13 77.0 51 74.5
LjContig00489g0016354 Lotus japonicus HOM05D000216 ORTHO05D001131 4.7e-13 77.0 51 74.5
Medtr4g051130 Medicago truncatula HOM05D000216 ORTHO05D001131 4.7e-13 77.0 51 74.5
RcHm_v2.0_CPg0502401 Rosa chinensis HOM05D000216 ORTHO05D001131 4.7e-13 77.0 51 74.5
Hund28715 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.7e-13 77.0 51 72.5
Sc15g0001760 Simmondsia chinensis HOM05D000216 ORTHO05D001131 4.7e-13 77.0 51 74.5
Sc25g0001960 Simmondsia chinensis HOM05D000216 ORTHO05D001131 4.7e-13 77.0 51 74.5
CsaV3_UNG208330 Cucumis sativus L. HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund08566 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund18042 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund19314 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund23975 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund25935 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund27452 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund27562 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund27608 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund27642 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund27656 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund27670 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund27699 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund27744 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund27763 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund27805 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund27822 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund27840 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund27867 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund27916 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund27928 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund27944 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund27998 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund28018 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund28026 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund28058 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund28085 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund28123 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund28131 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund28139 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund28154 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund28163 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund28189 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund28208 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund28237 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund28247 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund28260 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund28280 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund28292 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund28336 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund28351 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund28353 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund28372 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund28385 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund28398 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund28500 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund28555 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund28578 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund28618 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund28642 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund28686 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund28697 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund28702 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund28806 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund28824 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund28835 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund28904 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund28914 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund28984 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund29113 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund29197 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund29207 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund29354 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund29389 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund29478 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund29486 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund29645 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund29745 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund30018 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Hund30063 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.1e-13 76.6 51 72.5
Eucgr.E02520 Eucalyptus grandis HOM05D000216 ORTHO05D001131 8.0e-13 76.3 51 74.5
GSVIVG01035251001 Vitis vinifera HOM05D000216 ORTHO05D001131 8.0e-13 76.3 50 72.0
arahy.Tifrunner.gnm1.ann1.MIWC4Y Arachis hypogaea HOM05D000216 ORTHO05D001131 1.0e-12 75.9 51 72.5
BolC7t41731H Brassica oleracea HOM05D000216 ORTHO05D001131 1.0e-12 75.9 51 72.5
Psat0s6357g0040 Pisum sativum HOM05D000216 ORTHO05D001131 1.4e-12 75.5 51 72.5
Psat0s6638g0160 Pisum sativum HOM05D000216 ORTHO05D001131 1.4e-12 75.5 51 72.5
Psat3g186440 Pisum sativum HOM05D000216 ORTHO05D001131 1.4e-12 75.5 51 72.5
Psat7g199200 Pisum sativum HOM05D000216 ORTHO05D001131 1.4e-12 75.5 51 72.5
Solyc02g067590.2 Solanum lycopersicum HOM05D000216 ORTHO05D001131 1.4e-12 75.5 51 72.5
VMungo0647G1325 Vigna mungo HOM05D000216 ORTHO05D001131 1.4e-12 75.5 51 74.5
VMungo1015G0001 Vigna mungo HOM05D000216 ORTHO05D001131 1.4e-12 75.5 51 74.5
PSO548G0026 Papaver somniferum HOM05D000216 ORTHO05D001131 2.3e-12 74.7 51 72.5
Sed0002232 Sechium edule HOM05D000216 ORTHO05D001131 2.3e-12 74.7 51 70.6
Sed0007596 Sechium edule HOM05D000216 ORTHO05D001131 2.3e-12 74.7 51 70.6
Sed0025233 Sechium edule HOM05D000216 ORTHO05D001131 2.3e-12 74.7 51 70.6
CAN.G100.43 Capsicum annuum HOM05D000216 ORTHO05D001131 3.0e-12 74.3 51 74.5
CAN.G1648.7 Capsicum annuum HOM05D000216 ORTHO05D001131 4.0e-12 73.9 51 72.5
Lj2C1237G9 Lonicera japonica HOM05D000216 ORTHO05D001131 4.0e-12 73.9 51 70.6
Gohir.D02G042933 Gossypium hirsutum HOM05D000216 ORTHO05D001131 5.2e-12 73.6 51 72.5
unitig_91.g26498 Utricularia gibba HOM05D000216 ORTHO05D001131 5.2e-12 73.6 51 68.6
Psat4g147960 Pisum sativum HOM05D000216 ORTHO05D001131 6.8e-12 73.2 51 70.6
Psat0s5655g0160 Pisum sativum HOM05D000216 ORTHO05D001131 8.8e-12 72.8 51 68.6
Solyc10g017920.1 Solanum lycopersicum HOM05D000216 ORTHO05D001131 1.5e-11 72.0 51 70.6
Medtr0002s0510 Medicago truncatula HOM05D000216 ORTHO05D001131 2.6e-11 71.2 51 66.7
Migut.D01417 Erythranthe guttata HOM05D000216 ORTHO05D001131 3.4e-11 70.9 45 77.8
Gorai.007G168000 Gossypium raimondii HOM05D000216 ORTHO05D001131 3.4e-11 70.9 48 75.0
HanXRQChr11g0326591 Helianthus annuus HOM05D000216 ORTHO05D001131 3.4e-11 70.9 51 70.6
HanXRQCPg0579801 Helianthus annuus HOM05D000216 ORTHO05D001131 3.4e-11 70.9 51 70.6
Lsat_1_v5_gn_1_118620 Lactuca sativa HOM05D000216 ORTHO05D001131 3.4e-11 70.9 51 70.6
Lsat_1_v5_gn_1_92840 Lactuca sativa HOM05D000216 ORTHO05D001131 3.4e-11 70.9 51 70.6
Gorai.008G095600 Gossypium raimondii HOM05D000216 ORTHO05D001131 4.4e-11 70.5 51 68.6
HanXRQChr11g0340031 Helianthus annuus HOM05D000216 ORTHO05D001131 5.7e-11 70.1 51 70.6
arahy.Tifrunner.gnm1.ann1.Q51NGA Arachis hypogaea HOM05D000216 ORTHO05D001131 7.5e-11 69.7 51 68.6
Gorai.005G047300 Gossypium raimondii HOM05D000216 ORTHO05D001131 1.3e-10 68.9 51 68.6
Gohir.D12G085301 Gossypium hirsutum HOM05D000216 ORTHO05D001131 1.7e-10 68.6 51 66.7
HanXRQChr00c0165g0572161 Helianthus annuus HOM05D000216 ORTHO05D001131 4.8e-10 67.0 48 70.8
Medtr5g005060 Medicago truncatula HOM05D000216 ORTHO05D001131 8.3e-10 66.2 43 72.1
ClCG07G004170 Citrullus lanatus HOM05D000216 ORTHO05D001131 2.7e-08 61.2 51 62.7
CSS0046430 Camellia sinensis var. sinensis HOM05D000216 ORTHO05D001131 3.5e-08 60.8 41 70.7
Mapoly0019s0087 Marchantia polymorpha HOM05D000216 ORTHO05D001131 1.7e-07 58.5 50 54.0
BolSC46t60987H Brassica oleracea HOM05D000216 ORTHO05D001131 7.2e-06 53.1 38 68.4
Migut.E00860 Erythranthe guttata HOM05D000216 ORTHO05D001131 9.5e-06 52.8 33 75.8


User provided reference genes

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