Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g077640.3 Solanum lycopersicum HOM05D000725 ORTHO05D002005 8.8e-56 219.9 102 100.0
Sopen08g026150 Solanum pennellii HOM05D000725 ORTHO05D002005 1.3e-35 152.9 82 82.9
PGSC0003DMG400001852 Solanum tuberosum HOM05D000725 ORTHO05D002005 2.3e-32 142.1 82 78.0
Solyc08g077610.3 Solanum lycopersicum HOM05D000725 ORTHO05D002005 4.0e-32 141.4 85 72.9
Sopen08g017620 Solanum pennellii HOM05D000725 ORTHO05D002005 3.1e-29 131.7 82 74.4
Solyc08g061390.3 Solanum lycopersicum HOM05D000725 ORTHO05D002005 1.2e-28 129.8 85 70.6
CAN.G362.23 Capsicum annuum HOM05D000725 ORTHO05D002005 8.9e-24 113.6 84 60.7
Sopen08g026200 Solanum pennellii HOM05D000725 ORTHO05D002005 1.2e-23 113.2 82 59.8
PGSC0003DMG400006747 Solanum tuberosum HOM05D000725 ORTHO05D002005 2.0e-23 112.5 83 60.2
Sopen01g030290 Solanum pennellii HOM05D000725 ORTHO05D002005 3.4e-23 111.7 82 61.0
Sopen04g024270 Solanum pennellii HOM05D000725 ORTHO05D002005 3.4e-23 111.7 82 61.0
CAN.G649.4 Capsicum annuum HOM05D000725 ORTHO05D002005 4.4e-23 111.3 82 61.0
Solyc04g054440.3 Solanum lycopersicum HOM05D000725 ORTHO05D002005 5.7e-23 110.9 82 61.0
Solyc01g068320.3 Solanum lycopersicum HOM05D000725 ORTHO05D002005 7.5e-23 110.5 82 61.0
PGSC0003DMG400001851 Solanum tuberosum HOM05D000725 ORTHO05D002005 9.8e-23 110.2 82 58.5
PGSC0003DMG400006745 Solanum tuberosum HOM05D000725 ORTHO05D002005 9.8e-23 110.2 82 59.8
CAN.G1445.14 Capsicum annuum HOM05D000725 ORTHO05D002005 1.7e-22 109.4 82 61.0
Solyc01g068293.1 Solanum lycopersicum HOM05D000725 ORTHO05D002005 2.2e-22 109.0 82 59.8
Solyc01g068297.1 Solanum lycopersicum HOM05D000725 ORTHO05D002005 2.2e-22 109.0 82 59.8
Sopen01g030240 Solanum pennellii HOM05D000002 ORTHO05D000001 2.8e-22 108.6 82 59.8
Sopen01g030250 Solanum pennellii HOM05D000725 ORTHO05D002005 2.8e-22 108.6 82 59.8
Sopen01g030260 Solanum pennellii HOM05D000725 ORTHO05D002005 2.8e-22 108.6 82 59.8
Solyc08g077690.3 Solanum lycopersicum HOM05D000725 ORTHO05D002005 3.7e-22 108.2 82 57.3
CAN.G572.31 Capsicum annuum HOM05D000725 ORTHO05D002005 1.1e-21 106.7 82 56.1
Sopen01g026600 Solanum pennellii HOM05D000725 ORTHO05D002005 1.6e-20 102.8 82 57.3
CAN.G1016.5 Capsicum annuum HOM05D000725 ORTHO05D002005 3.5e-20 101.7 74 63.5
Solyc01g060460.2 Solanum lycopersicum HOM05D000725 ORTHO05D002005 7.8e-20 100.5 82 56.1
PGSC0003DMG400014992 Solanum tuberosum HOM05D000725 ORTHO05D002005 7.8e-20 100.5 82 56.1
Nitab4.5_0001981g0020 Nicotiana tabacum HOM05D000725 ORTHO05D002005 1.7e-19 99.4 74 60.8
Nitab4.5_0002559g0010 Nicotiana tabacum HOM05D000725 ORTHO05D002005 2.3e-19 99.0 74 60.8
PGSC0003DMG400014445 Solanum tuberosum HOM05D000725 ORTHO05D002005 5.0e-19 97.8 87 56.3
PGSC0003DMG400001835 Solanum tuberosum HOM05D000725 ORTHO05D002005 5.6e-18 94.4 82 52.4
Solyc02g033050.3 Solanum lycopersicum HOM05D000725 ORTHO05D002005 1.6e-17 92.8 88 55.7
Peaxi162Scf00715g00117 Petunia axillaris HOM05D000725 ORTHO05D002005 2.0e-15 85.9 80 51.2
Solyc08g077670.3 Solanum lycopersicum HOM05D000725 ORTHO05D014250 2.9e-14 82.0 83 49.4
CAN.G362.24 Capsicum annuum HOM05D000725 ORTHO05D002005 3.7e-14 81.6 72 51.4
Peaxi162Scf00715g00116 Petunia axillaris HOM05D000725 ORTHO05D002005 1.4e-13 79.7 82 46.3
CAN.G916.9 Capsicum annuum HOM05D000725 ORTHO05D002005 4.1e-13 78.2 52 61.5
Solyc03g098175.1 Solanum lycopersicum HOM05D000725 ORTHO05D002005 1.8e-08 62.8 45 55.6
Medtr7g450860 Medicago truncatula HOM05D000725 ORTHO05D002005 2.3e-08 62.4 80 38.8
Oeu064142.1 Olea europaea HOM05D000725 ORTHO05D002005 6.8e-08 60.8 81 40.7
PGR042G0187 Punica granatum HOM05D000725 ORTHO05D002005 1.2e-07 60.1 60 43.3
Solyc08g077600.1 Solanum lycopersicum HOM05D000725 ORTHO05D002005 1.5e-07 59.7 40 60.0
CAN.G572.34 Capsicum annuum HOM05D000725 ORTHO05D002005 2.6e-07 58.9 43 58.1
Medtr7g450780 Medicago truncatula HOM05D000725 ORTHO05D002005 2.6e-07 58.9 80 36.2
Oeu064144.1 Olea europaea HOM05D000725 ORTHO05D002005 2.6e-07 58.9 80 38.8
Actinidia31487 Actinidia chinensis HOM05D000725 ORTHO05D002005 4.4e-07 58.2 73 39.7
Medtr7g050445 Medicago truncatula HOM05D000725 ORTHO05D002005 4.4e-07 58.2 81 35.8
Solyc08g062060.1 Solanum lycopersicum HOM05D000725 ORTHO05D002005 4.4e-07 58.2 39 59.0
Solyc01g058705.1 Solanum lycopersicum HOM05D000725 ORTHO05D391697 7.5e-07 57.4 44 56.8
Nn1g00714 Nelumbo nucifera HOM05D000725 ORTHO05D002005 9.8e-07 57.0 67 41.8
Ca_20450_v3 Cicer arietinum L. HOM05D000725 ORTHO05D002005 1.7e-06 56.2 78 38.5
PGR042G2995 Punica granatum HOM05D000725 ORTHO05D002005 1.7e-06 56.2 68 38.2
MSTRG.20502 Avicennia marina HOM05D000725 ORTHO05D002005 2.2e-06 55.8 78 38.5
SalBow1G7998 Salvia bowleyana HOM05D000725 ORTHO05D002005 2.2e-06 55.8 64 42.2
Thhalv10010079m.g Eutrema salsugineum HOM05D000725 ORTHO05D002005 2.9e-06 55.5 83 33.7
TPR.G39061 Trifolium pratense HOM05D000725 ORTHO05D002005 2.9e-06 55.5 73 42.5
HanXRQChr14g0457431 Helianthus annuus HOM05D000725 ORTHO05D002005 3.7e-06 55.1 42 50.0
HanXRQChr14g0457451 Helianthus annuus HOM05D000725 ORTHO05D002005 3.7e-06 55.1 42 50.0
Lsat_1_v5_gn_3_15721 Lactuca sativa HOM05D000725 ORTHO05D002005 3.7e-06 55.1 44 54.5
DCAR_008315 Daucus carota HOM05D000725 ORTHO05D002005 4.9e-06 54.7 67 40.3
Hma1.2p1_1672F.1_g296860 Hydrangea macrophylla HOM05D000725 ORTHO05D002005 4.9e-06 54.7 48 47.9
Hma1.2p1_2802F.1_g328820 Hydrangea macrophylla HOM05D000725 ORTHO05D002005 4.9e-06 54.7 48 47.9
Thecc.08G178700 Theobroma cacao HOM05D000725 ORTHO05D002005 4.9e-06 54.7 71 40.8
ECA246G0377 Erigeron canadensis HOM05D000725 ORTHO05D002005 6.4e-06 54.3 44 52.3
HanXRQChr06g0167171 Helianthus annuus HOM05D000725 ORTHO05D002005 6.4e-06 54.3 44 54.5
CiPaw.12G056600 Carya illinoinensis HOM05D000725 ORTHO05D002005 8.3e-06 53.9 45 53.3
AUR62018808 Chenopodium quinoa HOM05D000725 ORTHO05D002005 8.3e-06 53.9 75 40.0
Dinv28892 Davidia involucrata HOM05D000725 ORTHO05D002005 8.3e-06 53.9 87 36.8
Lj9A551T46 Lonicera japonica HOM05D000725 ORTHO05D002005 8.3e-06 53.9 64 43.8
Medtr7g450820 Medicago truncatula HOM05D000725 ORTHO05D002005 8.3e-06 53.9 64 37.5
SalBow5G2797 Salvia bowleyana HOM05D000725 ORTHO05D002005 8.3e-06 53.9 50 48.0
vmacro14118 Vaccinium macrocarpon HOM05D000725 ORTHO05D002005 8.3e-06 53.9 79 36.7


User provided reference genes

Program Settings