Gene: Sopen01g030250

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g030250
  • Transcript Identifier Sopen01g030250.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 87457767-87461306 : negative

Gene Family Information

  • ID HOM05D000725
  • #Genes/#Species 800/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g030250.1

Descriptions

  • Description chromatin remodeling 31 (chr31) | FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding | INVOLVED IN: biological_process unknown | EXPRESSED IN: 13 plant structures | EXPRESSED DURING: 6 growth stages | CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal , DNA/RNA helicase, C-terminal , Helicase, superfamily 1/2, ATP-binding domain , SNF2-related | BEST Arabidopsis thaliana protein match is: chromatin remodeling 40
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0080188
IEA
InterProgene silencing by RNA-directed DNA methylation
GO:1900370
ISO
PLAZA Integrative Orthologypositive regulation of RNA interference AT3G24340

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
InterProATP binding
GO:0070615
IEA
InterPronucleosome-dependent ATPase activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000330 SNF2, N-terminal
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR038718 SNF2-like, N-terminal domain superfamily
IPR001650 Helicase, C-terminal
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR044567 SNF2 domain-containing protein CLSY/DRD1
Mapman id Description
16.9.1.2 RNA processing.mRNA silencing.transacting siRNA pathway.regulatory protein (CLSY3/4)