Gene: vmacro14118

General Information

Structural Information

  • Species Vaccinium macrocarpon
  • Gene Identifier vmacro14118
  • Transcript Identifier vmacro14118-RA
  • Gene Type Coding gene
  • Location scaffold00321_Vaccinium_macrocarpon_Stevens_v1 : 276026-279633 : positive

Gene Family Information

  • ID HOM05D000725
  • #Genes/#Species 800/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id vmacro14118_Vaccinium_macrocarpon_Stevens_v1

Descriptions

  • Description Similar to CLSY3: SNF2 domain-containing protein CLASSY 3 (Arabidopsis thaliana OX=3702)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0080188
IEA
InterProgene silencing by RNA-directed DNA methylation
GO:1900370
ISO
PLAZA Integrative Orthologypositive regulation of RNA interference AT3G24340

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
ISO
PLAZA Homology (enrichment)ATP binding HOM05D000725
GO:0070615
ISO
PLAZA Homology (enrichment)nucleosome-dependent ATPase activity HOM05D000725

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR001650 Helicase, C-terminal
IPR038718 SNF2-like, N-terminal domain superfamily
IPR044567 SNF2 domain-containing protein CLSY/DRD1
Mapman id Description
16.9.1.2 RNA processing.mRNA silencing.transacting siRNA pathway.regulatory protein (CLSY3/4)