Gene: PGSC0003DMG400014445

General Information

Structural Information

Species Solanum tuberosum
Gene Identifier PGSC0003DMG400014445
Transcript Identifier PGSC0003DMT400037430
Gene Type Coding gene
Location ST4.03ch12 : 49172758-49174973 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000725
#Genes/#Species 800/97
Phylogenetic origin

ID ORTHO05D002005
#Genes/#Species 327/92
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate
Block Duplication Block duplicate

Labels

Identifiers

pacid 37448990
id PGSC0003DMG400014445.v4.03
uniprot M1B5D9

Descriptions

Short descriptions
Ortholog descriptions

Description ATP-dependent helicase

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0080188	IEA	GOA Database	gene silencing by RNA-directed DNA methylation
GO:0080188	IEA	InterPro	gene silencing by RNA-directed DNA methylation
GO:1900370	ISO	PLAZA Integrative Orthology	positive regulation of RNA interference	AT3G24340

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005524	IEA	GOA Database	ATP binding
GO:0005524	IEA	InterPro	ATP binding
GO:0070615	IEA	GOA Database	nucleosome-dependent ATPase activity
GO:0070615	IEA	InterPro	nucleosome-dependent ATPase activity

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR000330	SNF2, N-terminal
IPR038718	SNF2-like, N-terminal domain superfamily
IPR014001	Helicase superfamily 1/2, ATP-binding domain
IPR044567	SNF2 domain-containing protein CLSY/DRD1
IPR027417	P-loop containing nucleoside triphosphate hydrolase

Mapman id	Description
16.9.1.2	RNA processing.mRNA silencing.transacting siRNA pathway.regulatory protein (CLSY3/4)