Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc08g074710.1 Solanum lycopersicum HOM05D000725 ORTHO05D002005 2.9e-34 147.9 70 100.0
Sopen08g026150 Solanum pennellii HOM05D000725 ORTHO05D002005 4.7e-16 87.4 109 46.8
Solyc08g077590.1 Solanum lycopersicum HOM05D000725 ORTHO05D002005 3.9e-15 84.3 109 45.9
Solyc08g077610.3 Solanum lycopersicum HOM05D000725 ORTHO05D002005 3.9e-15 84.3 109 45.9
PGSC0003DMG400001852 Solanum tuberosum HOM05D000725 ORTHO05D002005 6.7e-15 83.6 107 45.8
CAN.G649.4 Capsicum annuum HOM05D000725 ORTHO05D002005 1.1e-14 82.8 111 44.1
Solyc08g061340.1 Solanum lycopersicum HOM05D000725 ORTHO05D002005 4.4e-14 80.9 109 44.0
Solyc01g068293.1 Solanum lycopersicum HOM05D000725 ORTHO05D002005 5.7e-14 80.5 98 49.0
Sopen01g030250 Solanum pennellii HOM05D000725 ORTHO05D002005 5.7e-14 80.5 109 44.0
Sopen01g030260 Solanum pennellii HOM05D000725 ORTHO05D002005 5.7e-14 80.5 109 44.0
PGSC0003DMG400006747 Solanum tuberosum HOM05D000725 ORTHO05D002005 5.7e-14 80.5 109 44.0
Solyc04g054440.3 Solanum lycopersicum HOM05D000725 ORTHO05D002005 9.7e-14 79.7 112 43.8
PGSC0003DMG400040563 Solanum tuberosum HOM05D000725 ORTHO05D002005 1.3e-13 79.3 110 42.7
PGSC0003DMG400038408 Solanum tuberosum HOM05D000725 ORTHO05D002005 1.7e-13 79.0 111 45.0
CAN.G1016.5 Capsicum annuum HOM05D000725 ORTHO05D002005 2.2e-13 78.6 109 44.0
CAN.G572.31 Capsicum annuum HOM05D000725 ORTHO05D002005 3.7e-13 77.8 109 44.0
Sopen01g030290 Solanum pennellii HOM05D000725 ORTHO05D002005 3.7e-13 77.8 109 43.1
Sopen04g024270 Solanum pennellii HOM05D000725 ORTHO05D002005 3.7e-13 77.8 112 42.9
Solyc01g060460.2 Solanum lycopersicum HOM05D000725 ORTHO05D002005 4.8e-13 77.4 109 43.1
Solyc01g068297.1 Solanum lycopersicum HOM05D000725 ORTHO05D002005 4.8e-13 77.4 109 43.1
Solyc01g068320.3 Solanum lycopersicum HOM05D000725 ORTHO05D002005 4.8e-13 77.4 109 43.1
Sopen01g026600 Solanum pennellii HOM05D000725 ORTHO05D002005 4.8e-13 77.4 109 43.1
PGSC0003DMG400006745 Solanum tuberosum HOM05D000725 ORTHO05D002005 6.3e-13 77.0 107 43.0
PGSC0003DMG400014445 Solanum tuberosum HOM05D000725 ORTHO05D002005 1.1e-12 76.3 109 44.0
Solyc08g062000.3 Solanum lycopersicum HOM05D000725 ORTHO05D002005 1.8e-12 75.5 109 44.0
Sopen08g017570 Solanum pennellii HOM05D000725 ORTHO05D002005 7.0e-12 73.6 44 77.3
PGSC0003DMG400001851 Solanum tuberosum HOM05D000725 ORTHO05D002005 7.0e-12 73.6 109 41.3
CAN.G1445.14 Capsicum annuum HOM05D000725 ORTHO05D002005 9.1e-12 73.2 109 42.2
PGSC0003DMG400001835 Solanum tuberosum HOM05D000725 ORTHO05D002005 9.1e-12 73.2 109 43.1
Sopen08g026200 Solanum pennellii HOM05D000725 ORTHO05D002005 1.2e-11 72.8 109 41.3
Sopen01g030240 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-11 72.4 44 75.0
Solyc08g077670.3 Solanum lycopersicum HOM05D000725 ORTHO05D014250 2.0e-11 72.0 90 48.9
Solyc08g077690.3 Solanum lycopersicum HOM05D000725 ORTHO05D002005 2.6e-11 71.6 109 40.4
CAN.G572.35 Capsicum annuum HOM05D000541 ORTHO05D000137 3.5e-11 71.2 44 72.7
PGSC0003DMG400035564 Solanum tuberosum HOM05D000725 ORTHO05D002005 3.5e-11 71.2 44 70.5
Sopen08g017580 Solanum pennellii HOM05D000725 ORTHO05D002005 7.7e-11 70.1 55 67.3
PGSC0003DMG400014992 Solanum tuberosum HOM05D000725 ORTHO05D002005 7.7e-11 70.1 44 72.7
Solyc01g049740.1 Solanum lycopersicum HOM05D000725 ORTHO05D002005 1.0e-10 69.7 90 44.4
Solyc08g062050.1 Solanum lycopersicum HOM05D000725 ORTHO05D002005 1.0e-10 69.7 45 71.1
CAN.G916.9 Capsicum annuum HOM05D000725 ORTHO05D002005 1.3e-10 69.3 109 40.4
Solyc08g061990.1 Solanum lycopersicum HOM05D000725 ORTHO05D002005 1.7e-10 68.9 44 72.7
Nitab4.5_0002559g0010 Nicotiana tabacum HOM05D000725 ORTHO05D002005 1.1e-09 66.2 111 37.8
Nitab4.5_0001981g0020 Nicotiana tabacum HOM05D000725 ORTHO05D002005 3.2e-09 64.7 111 37.8
Peaxi162Scf00715g00117 Petunia axillaris HOM05D000725 ORTHO05D002005 3.2e-09 64.7 115 36.5
Solyc08g061350.1 Solanum lycopersicum HOM05D000725 ORTHO05D002005 9.4e-09 63.2 39 76.9
Solyc08g077600.1 Solanum lycopersicum HOM05D000725 ORTHO05D002005 1.2e-08 62.8 45 68.9
Solyc02g033050.3 Solanum lycopersicum HOM05D000725 ORTHO05D002005 2.1e-08 62.0 89 42.7
Sopen08g026180 Solanum pennellii HOM05D000725 ORTHO05D014250 8.0e-08 60.1 109 38.5
Solyc08g061410.3 Solanum lycopersicum HOM05D000725 ORTHO05D002005 2.3e-07 58.5 65 53.8
Sopen08g016760 Solanum pennellii HOM05D017999 ORTHO05D014250 2.3e-07 58.5 42 66.7
Eucgr.E00332 Eucalyptus grandis HOM05D000725 ORTHO05D002005 3.0e-07 58.2 36 72.2
Sopen08g017620 Solanum pennellii HOM05D000725 ORTHO05D002005 6.7e-07 57.0 65 47.7
TAR636G0971 Trochodendron aralioides HOM05D000725 ORTHO05D002005 8.8e-07 56.6 41 58.5
Solyc08g061390.3 Solanum lycopersicum HOM05D000725 ORTHO05D002005 1.2e-06 56.2 36 69.4
Lsat_1_v5_gn_3_15721 Lactuca sativa HOM05D000725 ORTHO05D002005 1.5e-06 55.8 36 69.4
Actinidia25924 Actinidia chinensis HOM05D000725 ORTHO05D002005 2.0e-06 55.5 53 50.9
Hma1.2p1_1672F.1_g296860 Hydrangea macrophylla HOM05D000725 ORTHO05D002005 2.6e-06 55.1 50 52.0
Solyc08g062070.1 Solanum lycopersicum HOM05D000725 ORTHO05D002005 2.6e-06 55.1 44 61.4
Sopen08g017600 Solanum pennellii HOM05D000725 ORTHO05D014250 2.6e-06 55.1 107 35.5
Nn1g00714 Nelumbo nucifera HOM05D000725 ORTHO05D002005 3.3e-06 54.7 108 34.3
Sopen10g028210 Solanum pennellii HOM05D000725 ORTHO05D002005 3.3e-06 54.7 32 78.1
Dinv28892 Davidia involucrata HOM05D000725 ORTHO05D002005 4.4e-06 54.3 64 45.3
SHI07608 Sapria himalayana HOM05D000725 ORTHO05D002005 4.4e-06 54.3 36 58.3
Aqoxy4G01578 Aquilegia oxysepala HOM05D000725 ORTHO05D002005 5.7e-06 53.9 55 49.1
Hma1.2p1_2802F.1_g328820 Hydrangea macrophylla HOM05D000725 ORTHO05D002005 9.7e-06 53.1 36 61.1
Lalb_Chr09g0324051 Lupinus albus HOM05D000725 ORTHO05D002005 9.7e-06 53.1 101 34.7


User provided reference genes

Program Settings