Gene: PGSC0003DMG400040563

General Information

Structural Information

Species Solanum tuberosum
Gene Identifier PGSC0003DMG400040563
Transcript Identifier PGSC0003DMT400090992
Gene Type Coding gene
Location ST4.03ch12 : 49141588-49143666 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000725
#Genes/#Species 800/97
Phylogenetic origin

ID ORTHO05D002005
#Genes/#Species 327/92
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate
Block Duplication Block duplicate

Labels

Identifiers

pacid 37446054
id PGSC0003DMG400040563.v4.03
uniprot M1DLN5

Descriptions

Short descriptions
Ortholog descriptions

Description Chromatin remodeling complex subunit

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0080188	IEA	GOA Database	gene silencing by RNA-directed DNA methylation
GO:0080188	IEA	InterPro	gene silencing by RNA-directed DNA methylation
GO:1900370	ISO	PLAZA Integrative Orthology	positive regulation of RNA interference	AT3G24340

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005524	IEA	GOA Database	ATP binding
GO:0005524	IEA	InterPro	ATP binding
GO:0070615	IEA	GOA Database	nucleosome-dependent ATPase activity
GO:0070615	IEA	InterPro	nucleosome-dependent ATPase activity

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR000330	SNF2, N-terminal
IPR038718	SNF2-like, N-terminal domain superfamily
IPR044567	SNF2 domain-containing protein CLSY/DRD1

Mapman id	Description
35.1	not assigned.annotated