Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g021290.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 8.4e-27 122.9 59 100.0
Solyc00g500052.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.5e-23 112.1 55 94.5
Solyc00g500135.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.5e-23 112.1 55 94.5
Solyc00g500205.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.5e-23 112.1 55 94.5
Solyc00g500290.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.5e-23 112.1 55 94.5
Solyc00g500319.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.5e-23 112.1 55 94.5
PGSC0003DMG400017664 Solanum tuberosum HOM05D000216 ORTHO05D000634 7.4e-23 109.8 55 92.7
CAN.G1180.14 Capsicum annuum HOM05D000216 ORTHO05D000634 1.3e-22 109.0 55 92.7
CAN.G1648.10 Capsicum annuum HOM05D000216 ORTHO05D000634 1.3e-22 109.0 55 92.7
Peaxi162Scf00379g00084 Petunia axillaris HOM05D000216 ORTHO05D000634 1.3e-22 109.0 55 92.7
CAN.G213.14 Capsicum annuum HOM05D000216 ORTHO05D000634 3.7e-22 107.5 55 90.9
CAN.G612.1 Capsicum annuum HOM05D000216 ORTHO05D000634 1.1e-21 105.9 55 90.9
RcHm_v2.0_CPg0502411 Rosa chinensis HOM05D000216 ORTHO05D000634 1.1e-21 105.9 55 89.1
CAN.G939.13 Capsicum annuum HOM05D000216 ORTHO05D000634 6.9e-21 103.2 52 92.3
ATCG00170 Arabidopsis thaliana HOM05D000216 ORTHO05D000634 9.0e-21 102.8 55 83.6
HanXRQChr00c0313g0573461 Helianthus annuus HOM05D000216 ORTHO05D000634 9.0e-21 102.8 55 83.6
HanXRQChr00c0601g0576531 Helianthus annuus HOM05D000216 ORTHO05D000634 9.0e-21 102.8 55 83.6
HanXRQChr08g0210181 Helianthus annuus HOM05D000216 ORTHO05D000634 9.0e-21 102.8 55 83.6
HanXRQChr11g0326611 Helianthus annuus HOM05D000216 ORTHO05D000634 9.0e-21 102.8 55 83.6
HanXRQCPg0579801 Helianthus annuus HOM05D000216 ORTHO05D001131 9.0e-21 102.8 55 83.6
Lj2C1239G21 Lonicera japonica HOM05D000216 ORTHO05D000634 9.0e-21 102.8 55 85.5
unitig_91.g26496 Utricularia gibba HOM05D000216 ORTHO05D000634 1.5e-20 102.1 55 85.5
BNapus_Darmor_BZH_scaffold_253p00060 Brassica napus HOM05D000216 ORTHO05D000634 2.0e-20 101.7 55 81.8
BraSC140t45598Z Brassica rapa HOM05D000216 ORTHO05D000634 2.0e-20 101.7 55 81.8
BraSC58t46405Z Brassica rapa HOM05D000216 ORTHO05D000634 2.0e-20 101.7 55 81.8
Medtr4g051120 Medicago truncatula HOM05D000216 ORTHO05D000634 2.0e-20 101.7 55 83.6
vmacro22403 Vaccinium macrocarpon HOM05D000216 ORTHO05D000634 2.0e-20 101.7 55 83.6
PSO548G0073 Papaver somniferum HOM05D000216 ORTHO05D000634 2.6e-20 101.3 55 87.3
RhsimPtG0004600 Rhododendron simsii HOM05D000743 ORTHO05D000580 2.6e-20 101.3 55 83.6
Hma1.2p1_0414F.1_g147670 Hydrangea macrophylla HOM05D000216 ORTHO05D000634 7.7e-20 99.8 55 85.5
Ah.10g027600 Amaranthus hybridus HOM05D000216 ORTHO05D000634 1.0e-19 99.4 55 83.6
Ah.10g027800 Amaranthus hybridus HOM05D000216 ORTHO05D000634 1.0e-19 99.4 55 83.6
Ah.10g028500 Amaranthus hybridus HOM05D000216 ORTHO05D000634 1.0e-19 99.4 55 83.6
DCAR_032474 Daucus carota HOM05D000216 ORTHO05D000634 1.0e-19 99.4 55 81.8
Gohir.A05G086066 Gossypium hirsutum HOM05D000216 ORTHO05D000634 1.0e-19 99.4 54 81.5
LjContig00489g0015528 Lotus japonicus HOM05D000216 ORTHO05D000634 1.0e-19 99.4 55 83.6
Potri.013G140260 Populus trichocarpa HOM05D000216 ORTHO05D000634 1.0e-19 99.4 55 81.8
SabraPtG0001000 Salix brachista HOM05D000216 ORTHO05D000634 1.0e-19 99.4 55 81.8
Atru.chr2.3403 Acer truncatum HOM05D000216 ORTHO05D000634 1.3e-19 99.0 55 85.5
ATR0187G001 Amborella trichopoda HOM05D000216 ORTHO05D000634 1.3e-19 99.0 55 83.6
Lsat_1_v5_gn_1_6760 Lactuca sativa HOM05D003214 ORTHO05D004330 1.3e-19 99.0 55 81.8
Lsat_1_v5_gn_4_51820 Lactuca sativa HOM05D000216 ORTHO05D009870 1.3e-19 99.0 55 81.8
Lsat_1_v5_gn_5_26601 Lactuca sativa HOM05D000216 ORTHO05D000634 1.3e-19 99.0 55 81.8
Medtr7g116700 Medicago truncatula HOM05D000216 ORTHO05D000634 1.3e-19 99.0 55 81.8
Gorai.013G017900 Gossypium raimondii HOM05D000216 ORTHO05D000634 1.7e-19 98.6 55 78.2
BolSC45t60937H Brassica oleracea HOM05D000216 ORTHO05D000634 2.2e-19 98.2 51 84.3
Eucgr.K02695 Eucalyptus grandis HOM05D000216 ORTHO05D000634 2.2e-19 98.2 55 81.8
Nitab4.5_0001761g0220 Nicotiana tabacum HOM05D000216 ORTHO05D000634 2.2e-19 98.2 52 86.5
Psat5g134640 Pisum sativum HOM05D000216 ORTHO05D000634 2.2e-19 98.2 55 78.2
QL93p0837_0001 Quercus lobata HOM05D000216 ORTHO05D000634 2.2e-19 98.2 55 80.0
Manes.01G046800 Manihot esculenta HOM05D000216 ORTHO05D000634 2.9e-19 97.8 55 81.8
Zm00001eb314280 Zea mays HOM05D000216 ORTHO05D000634 2.9e-19 97.8 54 81.5
Zm00001eb435270 Zea mays HOM05D000216 ORTHO05D000634 2.9e-19 97.8 54 81.5
Zm00001eb435480 Zea mays HOM05D000216 ORTHO05D000634 2.9e-19 97.8 54 81.5
Zm00001eb436830 Zea mays HOM05D000216 ORTHO05D000634 2.9e-19 97.8 54 81.5
Zm00001eb437260 Zea mays HOM05D000216 ORTHO05D000634 2.9e-19 97.8 54 81.5
Medtr0002s0510 Medicago truncatula HOM05D000216 ORTHO05D001131 3.8e-19 97.4 54 81.5
PGR111G0086 Punica granatum HOM05D000216 ORTHO05D000634 3.8e-19 97.4 55 83.6
CsaV3_UNG207810 Cucumis sativus L. HOM05D000216 ORTHO05D000634 5.0e-19 97.1 55 81.8
Sc07g0006590 Simmondsia chinensis HOM05D000216 ORTHO05D000634 5.0e-19 97.1 55 81.8
EL10As12g24016 Beta vulgaris HOM05D000216 ORTHO05D001131 6.5e-19 96.7 55 80.0
CDE07G0287 Ceratophyllum demersum HOM05D003429 ORTHO05D003873 6.5e-19 96.7 55 81.8
Migut.D01340 Erythranthe guttata HOM05D000216 ORTHO05D000634 8.5e-19 96.3 55 81.8
Hund03956 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.1e-18 95.9 54 83.3
Hund25862 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.1e-18 95.9 54 83.3
Hund27560 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.1e-18 95.9 54 83.3
Hund27610 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.1e-18 95.9 54 83.3
Hund27866 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.1e-18 95.9 54 83.3
Hund27917 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.1e-18 95.9 54 83.3
Hund27996 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.1e-18 95.9 54 83.3
Hund28277 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.1e-18 95.9 54 83.3
Hund28387 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.1e-18 95.9 54 83.3
Hund28559 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.1e-18 95.9 54 83.3
Hund28793 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.1e-18 95.9 54 83.3
Hund29352 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.1e-18 95.9 54 83.3
Hund29740 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.1e-18 95.9 54 83.3
Sc11g0005800 Simmondsia chinensis HOM05D000216 ORTHO05D000634 2.5e-18 94.7 61 73.8
SalBow1G4778 Salvia bowleyana HOM05D000216 ORTHO05D001131 4.2e-18 94.0 55 80.0
SGA_v2.0_scaffold119G32689 Striga asiatica HOM05D000216 ORTHO05D000634 4.2e-18 94.0 55 81.8
AUR62021208 Chenopodium quinoa HOM05D000216 ORTHO05D000634 9.4e-18 92.8 55 78.2
Psat2g044360 Pisum sativum HOM05D000216 ORTHO05D000634 9.4e-18 92.8 56 75.0
SGA_v2.0_scaffold477G52216 Striga asiatica HOM05D000216 ORTHO05D000634 9.4e-18 92.8 55 80.0
AUR62030122 Chenopodium quinoa HOM05D000216 ORTHO05D000634 1.2e-17 92.4 55 76.4
CiPaw.12G031000 Carya illinoinensis HOM05D000216 ORTHO05D000634 2.1e-17 91.7 55 76.4
AUR62030170 Chenopodium quinoa HOM05D000216 ORTHO05D000634 2.7e-17 91.3 55 76.4
LjContig00318g0011041 Lotus japonicus HOM05D000216 ORTHO05D000634 2.7e-17 91.3 55 78.2
Sed0025233 Sechium edule HOM05D000216 ORTHO05D001131 2.7e-17 91.3 55 76.4
Glyma.02G221400 Glycine max HOM05D000216 ORTHO05D000634 1.0e-16 89.4 55 72.7
Oeu012802.1 Olea europaea HOM05D000216 ORTHO05D000634 1.8e-16 88.6 54 79.6
Lalb_Chr09g0335361 Lupinus albus HOM05D000216 ORTHO05D000634 3.9e-16 87.4 55 74.5
AUR62041877 Chenopodium quinoa HOM05D000216 ORTHO05D000634 2.5e-15 84.7 49 79.6
Psat4g062520 Pisum sativum HOM05D000216 ORTHO05D003518 3.3e-15 84.3 45 80.0
arahy.Tifrunner.gnm1.ann1.N383GM Arachis hypogaea HOM05D000216 ORTHO05D000634 4.3e-15 84.0 55 70.9
Lsat_1_v5_gn_3_118000 Lactuca sativa HOM05D000216 ORTHO05D000634 7.4e-15 83.2 45 82.2
HPP92_016025 Vanilla planifolia HOM05D000216 ORTHO05D000634 2.8e-14 81.3 58 70.7
Hund15943 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.8e-14 80.5 55 70.9
Hund12594 Selenicereus undatus HOM05D000216 ORTHO05D000634 6.3e-14 80.1 54 72.2
Medtr5g098620 Medicago truncatula HOM05D000216 ORTHO05D000634 1.8e-13 78.6 48 72.9
Migut.F01072 Erythranthe guttata HOM05D000216 ORTHO05D000634 4.1e-13 77.4 49 73.5
AUR62042525 Chenopodium quinoa HOM05D000216 ORTHO05D000580 5.3e-13 77.0 45 77.8
Gorai.011G135800 Gossypium raimondii HOM05D000216 ORTHO05D000634 5.3e-13 77.0 55 67.3
Gohir.D10G123250 Gossypium hirsutum HOM05D000216 ORTHO05D000634 6.9e-13 76.6 55 63.6
Sed0000813 Sechium edule HOM05D000216 ORTHO05D000634 5.9e-12 73.6 45 80.0
EL10Ac3g05558 Beta vulgaris HOM05D000216 ORTHO05D000634 1.7e-11 72.0 47 68.1
Lj2C1239T72 Lonicera japonica HOM05D000216 ORTHO05D000634 1.7e-11 72.0 41 75.6
Solyc12g062650.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 6.5e-11 70.1 55 63.6
HanXRQChr00c0988g0578131 Helianthus annuus HOM05D000216 ORTHO05D000634 1.1e-10 69.3 34 85.3
Gohir.D03G089666 Gossypium hirsutum HOM05D000216 ORTHO05D000634 5.5e-10 67.0 32 84.4
Gorai.003G071700 Gossypium raimondii HOM05D000216 ORTHO05D000634 9.4e-10 66.2 32 81.2
Migut.D01414 Erythranthe guttata HOM05D000216 ORTHO05D000634 1.0e-08 62.8 36 80.6
Oeu010681.1 Olea europaea HOM05D000216 ORTHO05D000634 1.4e-08 62.4 33 84.8
Medtr7g069560 Medicago truncatula HOM05D000216 ORTHO05D000634 3.9e-08 60.8 32 78.1
SGA_v2.0_scaffold69G23193 Striga asiatica HOM05D000216 ORTHO05D000634 4.4e-07 57.4 49 57.1


User provided reference genes

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