Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g051910.3 Solanum lycopersicum HOM05D000974 ORTHO05D002201 4.0e-82 308.1 167 100.0
Nitab4.5_0000015g0310 Nicotiana tabacum HOM05D000974 ORTHO05D002201 6.9e-50 201.1 183 60.7
Peaxi162Scf00618g00536 Petunia axillaris HOM05D000974 ORTHO05D002201 3.4e-49 198.7 182 59.3
Nitab4.5_0007520g0010 Nicotiana tabacum HOM05D000974 ORTHO05D002201 4.5e-49 198.4 183 61.7
PGSC0003DMG400019613 Solanum tuberosum HOM05D000974 ORTHO05D002201 2.7e-46 189.1 192 58.3
Sopen06g017950 Solanum pennellii HOM05D000974 ORTHO05D002201 2.3e-45 186.0 95 92.6
Cc02_g01820 Coffea canephora HOM05D000974 ORTHO05D002201 3.6e-38 162.2 183 51.4
Peaxi162Scf00904g00127 Petunia axillaris HOM05D000974 ORTHO05D002201 7.9e-38 161.0 183 52.5
Nitab4.5_0002589g0120 Nicotiana tabacum HOM05D000974 ORTHO05D006133 1.8e-37 159.8 182 52.7
CAN.G589.6 Capsicum annuum HOM05D000974 ORTHO05D002201 2.3e-37 159.5 95 81.1
Nitab4.5_0005625g0030 Nicotiana tabacum HOM05D000974 ORTHO05D006133 2.3e-37 159.5 182 51.1
PGSC0003DMG400009106 Solanum tuberosum HOM05D000974 ORTHO05D002201 6.3e-35 151.4 182 51.1
Oeu041345.2 Olea europaea HOM05D000974 ORTHO05D002201 3.9e-29 132.1 183 47.0
Dinv28330 Davidia involucrata HOM05D000974 ORTHO05D002201 2.6e-28 129.4 183 44.8
Lj3A909T47 Lonicera japonica HOM05D000974 ORTHO05D002201 1.1e-26 124.0 185 44.9
MSTRG.58 Avicennia marina HOM05D000974 ORTHO05D002201 2.6e-25 119.4 183 44.3
Sopen03g003280 Solanum pennellii HOM05D000974 ORTHO05D002201 1.3e-24 117.1 182 43.4
Manes.06G157900 Manihot esculenta HOM05D000974 ORTHO05D002201 8.5e-24 114.4 182 43.4
SGA_v2.0_scaffold10G05257 Striga asiatica HOM05D000974 ORTHO05D002201 8.5e-24 114.4 186 45.2
Rhsim09G0204300 Rhododendron simsii HOM05D000974 ORTHO05D002201 9.4e-23 110.9 189 43.4
Actinidia31869 Actinidia chinensis HOM05D000974 ORTHO05D002201 1.2e-22 110.5 129 51.2
Potri.015G020800 Populus trichocarpa HOM05D000974 ORTHO05D002201 1.6e-22 110.2 181 41.4
Migut.F01047 Erythranthe guttata HOM05D000974 ORTHO05D002201 6.1e-22 108.2 182 42.3
Sabra12G0020500 Salix brachista HOM05D000974 ORTHO05D002201 6.1e-22 108.2 182 40.1
Duzib205G2067 Durio zibethinus HOM05D000974 ORTHO05D002201 1.8e-21 106.7 182 41.2
Gorai.004G115700 Gossypium raimondii HOM05D000974 ORTHO05D002201 3.0e-21 105.9 184 41.8
Potri.012G029300 Populus trichocarpa HOM05D000974 ORTHO05D002201 8.8e-21 104.4 181 39.2
Cfa016369 Carpinus fangiana HOM05D000974 ORTHO05D002201 1.1e-20 104.0 179 42.5
Sabra15G0015900 Salix brachista HOM05D000974 ORTHO05D002201 4.4e-20 102.1 181 40.9
QL09p010723 Quercus lobata HOM05D000974 ORTHO05D002201 5.7e-20 101.7 180 40.6
Haze_00119 Corylus avellana HOM05D000974 ORTHO05D002201 7.4e-20 101.3 181 42.5
DCAR_014534 Daucus carota HOM05D000974 ORTHO05D002201 9.7e-20 100.9 183 39.9
Duzib068G0199 Durio zibethinus HOM05D000974 ORTHO05D002201 9.7e-20 100.9 182 41.2
Hma1.2p1_0327F.1_g126750 Hydrangea macrophylla HOM05D000974 ORTHO05D002201 1.7e-19 100.1 190 38.9
FAN06G1357 Fragaria x ananassa HOM05D000974 ORTHO05D002201 4.8e-19 98.6 181 41.4
Solyc03g007320.4 Solanum lycopersicum HOM05D000974 ORTHO05D002201 4.8e-19 98.6 182 39.0
Duzib084G0975 Durio zibethinus HOM05D000974 ORTHO05D002201 8.2e-19 97.8 177 40.1
RcHm_v2.0_Chr1g0380181 Rosa chinensis HOM05D000974 ORTHO05D002201 8.2e-19 97.8 180 41.1
ECA233G4294 Erigeron canadensis HOM05D000974 ORTHO05D002201 1.1e-18 97.4 190 38.9
HanXRQChr08g0216681 Helianthus annuus HOM05D000974 ORTHO05D002201 1.4e-18 97.1 183 38.3
MD07G1285900 Malus domestica HOM05D000974 ORTHO05D002201 1.8e-18 96.7 183 41.0
Manes.14G008196 Manihot esculenta HOM05D000974 ORTHO05D002201 1.8e-18 96.7 185 42.2
TWI39G0207 Tripterygium wilfordii HOM05D000974 ORTHO05D002201 2.4e-18 96.3 179 40.2
Lj1g0000917 Lotus japonicus HOM05D000974 ORTHO05D002201 3.1e-18 95.9 180 40.0
Prupe.2G308000 Prunus persica HOM05D000974 ORTHO05D002201 3.1e-18 95.9 182 40.1
Cpa.g.sc3.57 Carica papaya HOM05D000974 ORTHO05D002201 5.3e-18 95.1 174 39.7
COL.COLO4_38260 Corchorus olitorius HOM05D000974 ORTHO05D002201 5.3e-18 95.1 159 42.1
Gohir.A08G097724 Gossypium hirsutum HOM05D000974 ORTHO05D002201 7.0e-18 94.7 184 40.8
Thecc.03G193700 Theobroma cacao HOM05D000974 ORTHO05D002201 1.2e-17 94.0 182 39.6
FAN10G1818 Fragaria x ananassa HOM05D000974 ORTHO05D006000 4.5e-17 92.0 181 40.9
Eucgr.K00333 Eucalyptus grandis HOM05D000974 ORTHO05D002201 1.3e-16 90.5 186 40.9
Actinidia03159 Actinidia chinensis HOM05D000974 ORTHO05D002201 2.9e-16 89.4 156 41.0
Atru.chr1.244 Acer truncatum HOM05D000974 ORTHO05D002201 3.8e-16 89.0 187 39.0
ClCG00G002840 Citrullus lanatus HOM05D000974 ORTHO05D002201 3.8e-16 89.0 183 42.1
Glyma.13G041500 Glycine max HOM05D000974 ORTHO05D002201 3.8e-16 89.0 170 41.2
unitig_747.g21850 Utricularia gibba HOM05D000974 ORTHO05D002201 3.8e-16 89.0 203 35.0
FAN10G2816 Fragaria x ananassa HOM05D000974 ORTHO05D006000 5.0e-16 88.6 181 39.2
TWI23G0688 Tripterygium wilfordii HOM05D000974 ORTHO05D002201 6.5e-16 88.2 179 38.5
Gohir.A12G251400 Gossypium hirsutum HOM05D000974 ORTHO05D002201 1.1e-15 87.4 184 40.8
Gorai.008G270300 Gossypium raimondii HOM05D000974 ORTHO05D002201 1.1e-15 87.4 183 40.4
CSS0036199 Camellia sinensis var. sinensis HOM05D000974 ORTHO05D002201 3.2e-15 85.9 122 48.4
Gohir.D12G252200 Gossypium hirsutum HOM05D000974 ORTHO05D002201 4.2e-15 85.5 183 40.4
CiPaw.05G257200 Carya illinoinensis HOM05D000974 ORTHO05D002201 1.2e-14 84.0 178 37.6
Ca_12682_v3 Cicer arietinum L. HOM05D000974 ORTHO05D002201 1.2e-14 84.0 171 41.5
Ca_12687_v3 Cicer arietinum L. HOM05D000974 ORTHO05D002201 1.2e-14 84.0 171 41.5
PGR142G0753 Punica granatum HOM05D000974 ORTHO05D002201 4.7e-14 82.0 181 37.0
MELO3C005872.2 Cucumis melo HOM05D000974 ORTHO05D002201 6.1e-14 81.6 184 40.8
Lsat_1_v5_gn_8_4900 Lactuca sativa HOM05D000974 ORTHO05D002201 6.1e-14 81.6 209 37.3
Lalb_Chr11g0066621 Lupinus albus HOM05D000974 ORTHO05D002201 8.0e-14 81.3 170 37.1
TPR.G17290 Trifolium pratense HOM05D000974 ORTHO05D002201 1.4e-13 80.5 156 37.8
Sed0026580 Sechium edule HOM05D000974 ORTHO05D002201 2.3e-13 79.7 163 39.3
Medtr3g090960 Medicago truncatula HOM05D000974 ORTHO05D002201 4.0e-13 79.0 178 34.8
Ciclev10006435m.g Citrus clementina HOM05D000974 ORTHO05D006133 6.7e-13 78.2 151 39.1
Phvul.009G054151 Phaseolus vulgaris HOM05D000974 ORTHO05D002201 6.7e-13 78.2 187 34.8
Glyma.04G238000 Glycine max HOM05D000974 ORTHO05D002201 8.8e-13 77.8 184 36.4
VMungo1309G0758 Vigna mungo HOM05D000974 ORTHO05D002201 8.8e-13 77.8 198 34.8
Sed0024329 Sechium edule HOM05D000974 ORTHO05D002201 1.5e-12 77.0 185 38.4
Glyma.06G125951 Glycine max HOM05D000974 ORTHO05D002201 2.0e-12 76.6 180 35.6
MD01G1216000 Malus domestica HOM05D000974 ORTHO05D002201 4.4e-12 75.5 165 38.2
CsaV3_5G000650 Cucumis sativus L. HOM05D000974 ORTHO05D002201 7.5e-12 74.7 192 39.1
Aqoxy5G04190 Aquilegia oxysepala HOM05D000974 ORTHO05D002201 9.7e-12 74.3 182 36.3
THA.LOC104811931 Tarenaya hassleriana HOM05D000974 ORTHO05D002201 9.7e-12 74.3 168 38.7
HanXRQChr13g0392541 Helianthus annuus HOM05D000974 ORTHO05D002201 1.7e-11 73.6 151 38.4
FvH4_7g31120 Fragaria vesca HOM05D000974 ORTHO05D002201 2.2e-11 73.2 127 40.9
Medtr1g028440 Medicago truncatula HOM05D000974 ORTHO05D002201 2.2e-11 73.2 169 37.3
Psat6g038520 Pisum sativum HOM05D000974 ORTHO05D002201 2.8e-11 72.8 171 37.4
FAN01G3027 Fragaria x ananassa HOM05D000974 ORTHO05D002201 3.7e-11 72.4 135 39.3
CDE10G1260 Ceratophyllum demersum HOM05D000974 ORTHO05D002201 1.1e-10 70.9 169 37.3
arahy.Tifrunner.gnm1.ann1.N493LC Arachis hypogaea HOM05D000974 ORTHO05D002201 2.4e-10 69.7 183 34.4
TPR.G33308 Trifolium pratense HOM05D000974 ORTHO05D002201 4.1e-10 68.9 178 34.8
Lalb_Chr08g0240511 Lupinus albus HOM05D000974 ORTHO05D002201 7.0e-10 68.2 184 34.2
Psat5g079400 Pisum sativum HOM05D000974 ORTHO05D002201 9.1e-10 67.8 93 45.2
arahy.Tifrunner.gnm1.ann1.Q9F21C Arachis hypogaea HOM05D000974 ORTHO05D002201 1.6e-09 67.0 189 35.4
FAN06G2074 Fragaria x ananassa HOM05D000974 ORTHO05D002201 1.6e-09 67.0 180 33.9
MBI06_g05040_MAGBIO Magnolia biondii HOM05D000974 ORTHO05D002201 7.7e-09 64.7 175 34.9
CANSAT21G1551 Cannabis sativa HOM05D000974 ORTHO05D002201 1.7e-08 63.5 205 36.1
AUR62019343 Chenopodium quinoa HOM05D000974 ORTHO05D002201 2.5e-07 59.7 200 33.5
AUR62006145 Chenopodium quinoa HOM05D000974 ORTHO05D002201 3.2e-07 59.3 200 33.5
vmacro10110 Vaccinium macrocarpon HOM05D000974 ORTHO05D002201 3.2e-07 59.3 94 40.4
PSO063G6288 Papaver somniferum HOM05D000974 ORTHO05D002201 7.2e-07 58.2 179 32.4
GSVIVG01028703001 Vitis vinifera HOM05D000974 ORTHO05D006133 4.7e-06 55.5 102 38.2
Ah.07g205990 Amaranthus hybridus HOM05D000974 ORTHO05D002201 8.0e-06 54.7 160 34.4
AagrBONN_evm.TU.Sc2ySwM_344.1315 Anthoceros agrestis HOM05D000974 ORTHO05D002201 8.0e-06 54.7 187 32.6


User provided reference genes

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