Gene: Lalb_Chr11g0066621

General Information

Structural Information

  • Species Lupinus albus
  • Gene Identifier Lalb_Chr11g0066621
  • Transcript Identifier Lalb_Chr11g0066621
  • Gene Type Coding gene
  • Location Lalb_Chr11 : 3337043-3340241 : positive

Gene Family Information

  • ID HOM05D000974
  • #Genes/#Species 616/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lalb_Chr11g0066621.v1
  • pacid 44564434
  • uniprot A0A6A4PQT4

Descriptions

  • Description KOG0114//KOG4206 - Predicted RNA-binding protein (RRM superfamily) // Spliceosomal protein snRNP-U1A/U2B
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006417
ISO
PLAZA Integrative Orthologyregulation of translation AT5G53180
GO:0000381
ISO
PLAZA Integrative Orthologyregulation of alternative mRNA splicing, via spliceosome AT5G53180
GO:0043484
ISO
PLAZA Integrative Orthologyregulation of RNA splicing AT5G53180
GO:0009846
ISO
PLAZA Integrative Orthologypollen germination AT5G53180
GO:0009845
ISO
PLAZA Integrative Orthologyseed germination AT5G53180

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT5G53180

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G53180
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT5G53180
GO:0000932
ISO
PLAZA Integrative OrthologyP-body AT5G53180

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR034794 PTBPH1/PTBPH2, RNA recognition motif 3
IPR035979 RNA-binding domain superfamily
IPR021790 PTBP1, RNA recognition motif 2-like
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
Mapman id Description
16.2.6.7 RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP factor activities.splicing factor (PTB)