Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc06g006080.3 Solanum lycopersicum HOM05D006184 ORTHO05D007862 0.0e+00 1351.3 652 100.0
Sopen06g002030 Solanum pennellii HOM05D006184 ORTHO05D007862 0.0e+00 1349.0 652 99.8
PGSC0003DMG400004151 Solanum tuberosum HOM05D006184 ORTHO05D007862 0.0e+00 1332.4 652 98.8
Nitab4.5_0001970g0070 Nicotiana tabacum HOM05D006184 ORTHO05D007862 0.0e+00 1281.9 647 95.2
Nitab4.5_0000102g0140 Nicotiana tabacum HOM05D006184 ORTHO05D007862 0.0e+00 1281.2 647 95.2
Peaxi162Scf00216g00033 Petunia axillaris HOM05D006184 ORTHO05D007862 0.0e+00 1256.9 649 94.1
Peaxi162Scf00451g00511 Petunia axillaris HOM05D006184 ORTHO05D007862 0.0e+00 1254.2 649 93.8
CAN.G780.2 Capsicum annuum HOM05D006184 ORTHO05D007862 0.0e+00 1218.0 646 92.1
Oeu009379.1 Olea europaea HOM05D006184 ORTHO05D007862 0.0e+00 1192.6 646 87.5
DCAR_007390 Daucus carota HOM05D006184 ORTHO05D007862 0.0e+00 1190.6 648 88.0
CSS0002743 Camellia sinensis var. sinensis HOM05D006184 ORTHO05D007862 0.0e+00 1188.3 647 87.2
Lj1A141T56 Lonicera japonica HOM05D006184 ORTHO05D007862 0.0e+00 1188.3 647 86.9
Actinidia38827 Actinidia chinensis HOM05D006184 ORTHO05D007862 0.0e+00 1186.4 647 87.9
Hma1.2p1_0227F.1_g096310 Hydrangea macrophylla HOM05D006184 ORTHO05D007862 0.0e+00 1184.5 644 87.0
EL10Ac7g16128 Beta vulgaris HOM05D006184 ORTHO05D007862 0.0e+00 1181.0 647 86.9
Ah.15g099710 Amaranthus hybridus HOM05D006184 ORTHO05D007862 0.0e+00 1178.3 647 86.7
MSTRG.24765 Avicennia marina HOM05D006184 ORTHO05D007862 0.0e+00 1178.3 647 86.4
Rhsim13G0072000 Rhododendron simsii HOM05D006184 ORTHO05D007862 0.0e+00 1176.8 647 86.6
Cc01_g13950 Coffea canephora HOM05D006184 ORTHO05D007862 0.0e+00 1175.6 646 85.6
AUR62001683 Chenopodium quinoa HOM05D006184 ORTHO05D007862 0.0e+00 1174.1 647 85.9
Prupe.6G060700 Prunus persica HOM05D006184 ORTHO05D007862 0.0e+00 1172.9 645 85.4
Cfa011654 Carpinus fangiana HOM05D006184 ORTHO05D007862 0.0e+00 1170.2 642 84.7
MD11G1080300 Malus domestica HOM05D006184 ORTHO05D007862 0.0e+00 1169.8 650 85.1
Phvul.006G065300 Phaseolus vulgaris HOM05D006184 ORTHO05D007862 0.0e+00 1169.5 645 85.6
COL.COLO4_19110 Corchorus olitorius HOM05D006184 ORTHO05D007862 0.0e+00 1168.7 645 85.4
Atru.chr3.4272 Acer truncatum HOM05D006184 ORTHO05D007862 0.0e+00 1167.1 646 85.9
VMungo0540G2418 Vigna mungo HOM05D006184 ORTHO05D007862 0.0e+00 1167.1 645 85.1
AUR62020099 Chenopodium quinoa HOM05D006184 ORTHO05D007862 0.0e+00 1166.8 648 85.6
FvH4_3g38200 Fragaria vesca HOM05D006184 ORTHO05D007862 0.0e+00 1165.2 649 85.4
HanXRQChr13g0388411 Helianthus annuus HOM05D006184 ORTHO05D007862 0.0e+00 1165.2 647 86.2
Ciclev10027988m.g Citrus clementina HOM05D006184 ORTHO05D007862 0.0e+00 1162.9 652 84.0
MD03G1074000 Malus domestica HOM05D006184 ORTHO05D007862 0.0e+00 1162.9 645 85.0
ECA248G3465 Erigeron canadensis HOM05D006184 ORTHO05D007862 0.0e+00 1162.5 647 85.8
FAN21G1896 Fragaria x ananassa HOM05D006184 ORTHO05D007862 0.0e+00 1161.7 649 84.9
Gohir.D03G117800 Gossypium hirsutum HOM05D006184 ORTHO05D007862 0.0e+00 1161.4 644 84.3
Gorai.003G124300 Gossypium raimondii HOM05D006184 ORTHO05D007862 0.0e+00 1161.4 644 84.3
QL01p026813 Quercus lobata HOM05D006184 ORTHO05D007862 0.0e+00 1161.4 646 84.1
Duzib168G0250 Durio zibethinus HOM05D006184 ORTHO05D007862 0.0e+00 1161.0 645 84.2
Gohir.A03G049500 Gossypium hirsutum HOM05D006184 ORTHO05D007862 0.0e+00 1161.0 644 84.3
Thecc.09G305300 Theobroma cacao HOM05D006184 ORTHO05D007862 0.0e+00 1160.6 646 84.4
Lj6g0009842 Lotus japonicus HOM05D006184 ORTHO05D007862 0.0e+00 1160.2 649 84.1
FAN16G1207 Fragaria x ananassa HOM05D006184 ORTHO05D007862 0.0e+00 1159.8 646 85.3
SalBow2G2183 Salvia bowleyana HOM05D006184 ORTHO05D007862 0.0e+00 1159.8 645 86.4
Nn2g13623 Nelumbo nucifera HOM05D006184 ORTHO05D007862 0.0e+00 1159.4 643 85.4
RcHm_v2.0_Chr5g0068641 Rosa chinensis HOM05D006184 ORTHO05D007862 0.0e+00 1159.4 649 84.6
FAN11G1847 Fragaria x ananassa HOM05D006184 ORTHO05D007862 0.0e+00 1156.7 649 84.6
FAN25G1982 Fragaria x ananassa HOM05D006184 ORTHO05D007862 0.0e+00 1156.7 649 84.7
Ah.08g220740 Amaranthus hybridus HOM05D006184 ORTHO05D007862 0.0e+00 1156.4 647 84.4
CiPaw.13G080700 Carya illinoinensis HOM05D006184 ORTHO05D007862 0.0e+00 1155.2 645 83.9
Manes.01G164200 Manihot esculenta HOM05D006184 ORTHO05D007862 0.0e+00 1155.2 648 84.7
HanXRQChr10g0298731 Helianthus annuus HOM05D006184 ORTHO05D007862 0.0e+00 1154.4 646 85.8
PGR102G1950 Punica granatum HOM05D006184 ORTHO05D007862 0.0e+00 1154.0 647 85.5
Hund04886 Selenicereus undatus HOM05D006184 ORTHO05D007862 0.0e+00 1154.0 650 83.7
Manes.02G121696 Manihot esculenta HOM05D006184 ORTHO05D007862 0.0e+00 1153.3 657 84.8
Medtr3g462970 Medicago truncatula HOM05D006184 ORTHO05D007862 0.0e+00 1152.5 646 84.7
TAR633G0598 Trochodendron aralioides HOM05D006184 ORTHO05D007862 0.0e+00 1152.5 642 84.1
arahy.Tifrunner.gnm1.ann1.F7MUQP Arachis hypogaea HOM05D006184 ORTHO05D007862 0.0e+00 1152.1 645 84.3
GSVIVG01024789001 Vitis vinifera HOM05D006184 ORTHO05D007862 0.0e+00 1151.3 638 86.1
Lalb_Chr17g0345001 Lupinus albus HOM05D006184 ORTHO05D007862 0.0e+00 1151.0 648 83.5
Sc12g0000880 Simmondsia chinensis HOM05D006184 ORTHO05D007862 0.0e+00 1151.0 647 84.1
CsaV3_1G036050 Cucumis sativus L. HOM05D006184 ORTHO05D007862 0.0e+00 1150.6 648 83.6
Glyma.18G065700 Glycine max HOM05D006184 ORTHO05D007862 0.0e+00 1150.6 648 84.3
arahy.Tifrunner.gnm1.ann1.N1U5TX Arachis hypogaea HOM05D006184 ORTHO05D007862 0.0e+00 1149.8 645 84.3
Oeu049272.2 Olea europaea HOM05D006184 ORTHO05D007862 0.0e+00 1149.8 714 78.6
Ca_14911_v3 Cicer arietinum L. HOM05D006184 ORTHO05D007862 0.0e+00 1149.4 645 84.5
Psat5g162200 Pisum sativum HOM05D006184 ORTHO05D007862 0.0e+00 1149.4 645 85.0
MELO3C020563.2 Cucumis melo HOM05D006184 ORTHO05D007862 0.0e+00 1149.0 646 83.7
Migut.G00281 Erythranthe guttata HOM05D006184 ORTHO05D007862 0.0e+00 1149.0 647 85.9
Thhalv10016370m.g Eutrema salsugineum HOM05D006184 ORTHO05D007862 0.0e+00 1148.7 646 85.1
MBI05_g03463_MAGBIO Magnolia biondii HOM05D006184 ORTHO05D007862 0.0e+00 1148.7 646 84.7
CARHR122950 Cardamine hirsuta HOM05D006184 ORTHO05D007862 0.0e+00 1147.5 651 84.6
Medtr3g462950 Medicago truncatula HOM05D006184 ORTHO05D007862 0.0e+00 1146.0 646 84.4
Lsat_1_v5_gn_5_158421 Lactuca sativa HOM05D006184 ORTHO05D007862 0.0e+00 1145.6 643 84.0
Aqoxy4G02661 Aquilegia oxysepala HOM05D006184 ORTHO05D007862 0.0e+00 1145.2 642 84.1
Eucgr.B02273 Eucalyptus grandis HOM05D006184 ORTHO05D007862 0.0e+00 1145.2 645 83.9
Carub.0004s1072 Capsella rubella HOM05D006184 ORTHO05D007862 0.0e+00 1144.4 646 84.8
ClCG03G000880 Citrullus lanatus HOM05D006184 ORTHO05D007862 0.0e+00 1144.0 647 83.5
AL4G24380 Arabidopsis lyrata HOM05D006184 ORTHO05D007862 0.0e+00 1142.5 644 84.9
AT2G29630 Arabidopsis thaliana HOM05D006184 ORTHO05D007862 0.0e+00 1141.7 644 84.6
Sp4g12340 Schrenkiella parvula HOM05D006184 ORTHO05D007862 0.0e+00 1140.9 645 84.7
Sed0012033 Sechium edule HOM05D006184 ORTHO05D007862 0.0e+00 1138.3 646 83.1
CDE03G0407 Ceratophyllum demersum HOM05D006184 ORTHO05D007862 0.0e+00 1135.6 642 83.0
Potri.009G043200 Populus trichocarpa HOM05D006184 ORTHO05D007862 0.0e+00 1132.1 648 84.6
Aa31LG5G7380 Aethionema arabicum HOM05D006184 ORTHO05D007862 0.0e+00 1131.3 646 82.4
Sc06g0008420 Simmondsia chinensis HOM05D006184 ORTHO05D007862 0.0e+00 1131.3 647 82.8
BcaC02g11044 Brassica carinata HOM05D006184 ORTHO05D007862 0.0e+00 1130.2 648 83.8
C04p21210 Brassica napus HOM05D006184 ORTHO05D007862 0.0e+00 1130.2 648 83.8
Glyma.11G176200 Glycine max HOM05D006184 ORTHO05D007862 0.0e+00 1128.6 648 83.0
BcaB02g10267 Brassica carinata HOM05D006184 ORTHO05D007862 0.0e+00 1127.5 646 83.4
BraA05t20491Z Brassica rapa HOM05D006184 ORTHO05D007862 0.0e+00 1127.1 648 83.6
Potri.001G249200 Populus trichocarpa HOM05D006184 ORTHO05D007862 0.0e+00 1126.3 646 84.8
A05p15770 Brassica napus HOM05D006184 ORTHO05D007862 0.0e+00 1125.5 648 83.5
Cpa.g.sc112.53 Carica papaya HOM05D006184 ORTHO05D007862 0.0e+00 1125.2 650 82.9
BolC4t23646H Brassica oleracea HOM05D006184 ORTHO05D007862 0.0e+00 1124.4 648 83.3
Sabra09G0030600 Salix brachista HOM05D006184 ORTHO05D007862 0.0e+00 1124.4 595 89.2
ATR0564G389 Amborella trichopoda HOM05D006184 ORTHO05D007862 0.0e+00 1122.1 647 83.0
TWI79G1750 Tripterygium wilfordii HOM05D006184 ORTHO05D007862 0.0e+00 1110.9 644 81.1
Os03g0679700 Oryza sativa ssp. japonica HOM05D006184 ORTHO05D007862 0.0e+00 1107.4 641 81.4
Dinv28618 Davidia involucrata HOM05D006184 ORTHO05D007862 0.0e+00 1107.0 593 88.5
SGA_v2.0_scaffold142G35644 Striga asiatica HOM05D006184 ORTHO05D007862 0.0e+00 1101.3 650 80.6
CDE04G0688 Ceratophyllum demersum HOM05D006184 ORTHO05D007862 0.0e+00 1094.0 585 87.5
Zm00001eb051950 Zea mays HOM05D006184 ORTHO05D007862 0.0e+00 1090.1 641 79.9
Haze_24258 Corylus avellana HOM05D006184 ORTHO05D007862 0.0e+00 1079.3 642 80.2
SHI12345 Sapria himalayana HOM05D006184 ORTHO05D007862 3.1e-303 1044.6 671 75.0
Pp3c16_8630 Physcomitrium patens HOM05D006184 ORTHO05D007862 1.2e-302 1042.7 583 85.1
Pp3c25_5720 Physcomitrium patens HOM05D006184 ORTHO05D007862 2.4e-300 1035.0 612 81.5
AagrBONN_evm.TU.Sc2ySwM_117.2039 Anthoceros agrestis HOM05D006184 ORTHO05D007862 1.2e-299 1032.7 591 82.9
TPR.G13280 Trifolium pratense HOM05D006184 ORTHO05D007862 2.7e-299 1031.6 645 77.5
Mapoly0078s0008 Marchantia polymorpha HOM05D006184 ORTHO05D007862 2.5e-297 1025.0 627 79.1
HPP92_012628 Vanilla planifolia HOM05D006184 ORTHO05D007862 8.9e-295 1016.5 539 87.0
SMO272G0033 Selaginella moellendorffii HOM05D006184 ORTHO05D007862 1.9e-289 998.8 569 82.2
SMO165G0141 Selaginella moellendorffii HOM05D006184 ORTHO05D007862 4.0e-287 991.1 554 83.2
Cfa015458 Carpinus fangiana HOM05D006184 ORTHO05D007862 1.6e-283 979.2 612 76.3
CBR_g30996 Chara braunii HOM05D006184 ORTHO05D007862 2.7e-251 872.1 484 85.3
Cre05.g240850 Chlamydomonas reinhardtii HOM05D006184 ORTHO05D007862 1.4e-226 790.0 554 69.1
Sabra16G0151300 Salix brachista HOM05D006184 ORTHO05D007862 1.7e-197 693.3 422 80.8
vmacro02987 Vaccinium macrocarpon HOM05D006184 ORTHO05D007862 1.7e-197 693.3 394 84.5
Haze_26876 Corylus avellana HOM05D006184 ORTHO05D007862 5.8e-193 678.3 581 58.9
RcHm_v2.0_Chr5g0068681 Rosa chinensis HOM05D006184 ORTHO05D007862 6.2e-147 525.4 267 92.5
SMO165G0069 Selaginella moellendorffii HOM05D006184 ORTHO05D007862 1.5e-124 451.1 557 47.2
SEGI_15306 Sequoiadendron giganteum HOM05D006184 ORTHO05D007862 2.0e-73 281.2 226 60.6
Nn2g11393 Nelumbo nucifera HOM05D006184 ORTHO05D007862 4.0e-69 266.9 125 95.2
Nn2g11394 Nelumbo nucifera HOM05D006184 ORTHO05D049308 1.5e-44 185.3 101 83.2
Nn2g11392 Nelumbo nucifera HOM05D006184 ORTHO05D007862 5.8e-44 183.3 163 55.8
RcHm_v2.0_Chr5g0068691 Rosa chinensis HOM05D006184 ORTHO05D049308 5.6e-39 166.8 93 82.8
Actinidia16074 Actinidia chinensis HOM05D006184 ORTHO05D007862 2.9e-35 154.5 150 56.7
Hma1.2p1_2020F.1_g311280 Hydrangea macrophylla HOM05D006184 ORTHO05D007862 3.8e-19 100.9 53 88.7
Hma1.2p1_0315F.1_g122560 Hydrangea macrophylla HOM05D006184 ORTHO05D007862 4.2e-18 97.4 53 86.8
Ah.02g117460 Amaranthus hybridus HOM05D000595 ORTHO05D004141 3.9e-08 64.3 32 90.6


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