Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g115580.4 Solanum lycopersicum HOM05D006305 ORTHO05D007984 3.9e-227 791.2 419 100.0
PGSC0003DMG400024658 Solanum tuberosum HOM05D006305 ORTHO05D007984 1.6e-196 689.5 397 94.2
Sopen03g034570 Solanum pennellii HOM05D006305 ORTHO05D007984 2.3e-195 685.6 394 93.7
CAN.G479.41 Capsicum annuum HOM05D006305 ORTHO05D007984 2.5e-173 612.5 384 85.4
Nitab4.5_0002756g0070 Nicotiana tabacum HOM05D006305 ORTHO05D007984 6.1e-172 607.8 407 81.8
Peaxi162Scf00274g00026 Petunia axillaris HOM05D006305 ORTHO05D007984 2.6e-162 575.9 440 73.0
CSS0018445 Camellia sinensis var. sinensis HOM05D006305 ORTHO05D007984 8.4e-137 491.1 388 70.1
Cc02_g33730 Coffea canephora HOM05D006305 ORTHO05D007984 8.4e-137 491.1 411 66.4
Dinv23970 Davidia involucrata HOM05D006305 ORTHO05D007984 8.4e-137 491.1 410 66.6
CSS0021232 Camellia sinensis var. sinensis HOM05D006305 ORTHO05D007984 7.1e-136 488.0 404 68.1
SGA_v2.0_scaffold34G13953 Striga asiatica HOM05D006305 ORTHO05D007984 8.7e-134 481.1 374 69.8
CiPaw.07G015100 Carya illinoinensis HOM05D006305 ORTHO05D007984 1.6e-132 476.9 380 66.1
TWI56G0624 Tripterygium wilfordii HOM05D006305 ORTHO05D007984 1.6e-132 476.9 382 67.5
GSVIVG01000016001 Vitis vinifera HOM05D006305 ORTHO05D007984 3.6e-132 475.7 379 68.9
CANSAT54G0217 Cannabis sativa HOM05D006305 ORTHO05D007984 8.1e-132 474.6 383 67.1
Migut.F01514 Erythranthe guttata HOM05D006305 ORTHO05D007984 8.1e-132 474.6 368 68.2
Rhsim05G0143900 Rhododendron simsii HOM05D006305 ORTHO05D007984 1.8e-131 473.4 405 63.5
EL10Ac4g09328 Beta vulgaris HOM05D006305 ORTHO05D007984 2.4e-131 473.0 365 67.1
MD04G1208500 Malus domestica HOM05D006305 ORTHO05D007984 2.0e-130 469.9 390 66.2
Manes.09G164300 Manihot esculenta HOM05D006305 ORTHO05D007984 2.6e-130 469.5 383 65.5
HanXRQChr15g0472081 Helianthus annuus HOM05D006305 ORTHO05D007984 3.4e-130 469.2 357 72.8
Lj9A683T26 Lonicera japonica HOM05D006305 ORTHO05D007984 5.8e-130 468.4 397 65.2
Gorai.013G204500 Gossypium raimondii HOM05D006305 ORTHO05D007984 7.6e-130 468.0 372 71.0
Gohir.D13G179200 Gossypium hirsutum HOM05D006305 ORTHO05D007984 2.2e-129 466.5 370 71.1
Ca_10097_v3 Cicer arietinum L. HOM05D006305 ORTHO05D007984 4.9e-129 465.3 393 64.1
MSTRG.306 Avicennia marina HOM05D006305 ORTHO05D007984 1.4e-128 463.8 393 65.6
FAN14G0751 Fragaria x ananassa HOM05D006305 ORTHO05D007984 2.4e-128 463.0 387 64.3
FAN14G5210 Fragaria x ananassa HOM05D006305 ORTHO05D007984 2.4e-128 463.0 387 64.3
QL03p004578 Quercus lobata HOM05D006305 ORTHO05D007984 4.2e-128 462.2 411 61.1
Phvul.007G181700 Phaseolus vulgaris HOM05D006305 ORTHO05D007984 5.4e-128 461.8 393 66.2
Glyma.10G156300 Glycine max HOM05D006305 ORTHO05D007984 7.1e-128 461.5 382 64.4
Nitab4.5_0001211g0080 Nicotiana tabacum HOM05D006305 ORTHO05D007984 9.3e-128 461.1 406 67.5
FAN05G5097 Fragaria x ananassa HOM05D006305 ORTHO05D007984 1.2e-127 460.7 387 64.1
Medtr1g082570 Medicago truncatula HOM05D006305 ORTHO05D007984 1.2e-127 460.7 409 62.1
RcHm_v2.0_Chr3g0454231 Rosa chinensis HOM05D006305 ORTHO05D007984 1.6e-127 460.3 382 64.7
SalBow6G6985 Salvia bowleyana HOM05D006305 ORTHO05D007984 1.6e-127 460.3 388 64.9
FvH4_6g05460 Fragaria vesca HOM05D006305 ORTHO05D007984 2.1e-127 459.9 376 65.2
Gohir.A13G173500 Gossypium hirsutum HOM05D006305 ORTHO05D007984 2.7e-127 459.5 380 69.2
vmacro19639 Vaccinium macrocarpon HOM05D006305 ORTHO05D007984 2.7e-127 459.5 459 60.1
Atru.chr2.472 Acer truncatum HOM05D006305 ORTHO05D007984 3.5e-127 459.1 384 64.6
Thecc.05G307300 Theobroma cacao HOM05D006305 ORTHO05D007984 3.5e-127 459.1 398 66.1
Ah.06g189130 Amaranthus hybridus HOM05D006305 ORTHO05D007984 6.0e-127 458.4 392 62.8
Eucgr.H04470 Eucalyptus grandis HOM05D006305 ORTHO05D007984 1.3e-126 457.2 401 64.6
arahy.Tifrunner.gnm1.ann1.84BFE2 Arachis hypogaea HOM05D006305 ORTHO05D007984 3.9e-126 455.7 397 65.7
ECA238G3439 Erigeron canadensis HOM05D006305 ORTHO05D007984 8.7e-126 454.5 369 68.3
VMungo0720G1654 Vigna mungo HOM05D006305 ORTHO05D007984 8.7e-126 454.5 377 67.4
Lsat_1_v5_gn_2_67520 Lactuca sativa HOM05D006305 ORTHO05D007984 1.9e-125 453.4 372 65.9
Psat0ss6702g0320 Pisum sativum HOM05D006305 ORTHO05D007984 2.5e-125 453.0 401 62.1
ClCG08G002270 Citrullus lanatus HOM05D006305 ORTHO05D007984 1.3e-124 450.7 402 60.9
FAN05G0068 Fragaria x ananassa HOM05D006305 ORTHO05D007984 1.3e-124 450.7 376 64.1
Hma1.2p1_0666F.1_g199520 Hydrangea macrophylla HOM05D006305 ORTHO05D007984 3.7e-124 449.1 319 74.0
Lj5g0026498 Lotus japonicus HOM05D006305 ORTHO05D007984 6.2e-124 448.4 371 66.3
Sabra05G0037100 Salix brachista HOM05D006305 ORTHO05D007984 1.1e-123 447.6 405 61.0
Potri.005G036700 Populus trichocarpa HOM05D006305 ORTHO05D007984 6.9e-123 444.9 405 61.0
Hund21683 Selenicereus undatus HOM05D006305 ORTHO05D007984 1.2e-122 444.1 404 65.1
TAR636G3548 Trochodendron aralioides HOM05D006305 ORTHO05D007984 1.2e-122 444.1 396 66.2
arahy.Tifrunner.gnm1.ann1.39Z7HW Arachis hypogaea HOM05D006305 ORTHO05D007984 2.6e-122 443.0 395 64.8
Lalb_Chr02g0148341 Lupinus albus HOM05D006305 ORTHO05D007984 3.4e-122 442.6 389 66.1
DCAR_029432 Daucus carota HOM05D006305 ORTHO05D007984 7.6e-122 441.4 396 64.4
PGR031G3204 Punica granatum HOM05D006305 ORTHO05D007984 9.9e-122 441.0 406 61.6
A05p42370 Brassica napus HOM05D006305 ORTHO05D007984 8.4e-121 438.0 397 58.7
BraA05t23013Z Brassica rapa HOM05D006305 ORTHO05D007984 8.4e-121 438.0 397 58.7
Carub.0003s0446 Capsella rubella HOM05D006305 ORTHO05D007984 7.1e-120 434.9 388 61.3
Aqoxy5G04250 Aquilegia oxysepala HOM05D006305 ORTHO05D007984 1.2e-119 434.1 394 59.6
BcaC05g30009 Brassica carinata HOM05D006305 ORTHO05D007984 1.2e-119 434.1 394 60.2
C05p61980 Brassica napus HOM05D006305 ORTHO05D007984 1.2e-119 434.1 394 60.2
Sp3g04060 Schrenkiella parvula HOM05D006305 ORTHO05D007984 1.6e-119 433.7 401 58.9
Thhalv10020823m.g Eutrema salsugineum HOM05D006305 ORTHO05D007984 7.9e-119 431.4 393 61.1
BolC5t34858H Brassica oleracea HOM05D006305 ORTHO05D007984 1.8e-118 430.3 392 59.4
FAN02G0061 Fragaria x ananassa HOM05D006305 ORTHO05D007984 2.3e-118 429.9 385 60.3
BcaC05g30168 Brassica carinata HOM05D006305 ORTHO05D007984 3.9e-118 429.1 413 58.8
AL3G15630 Arabidopsis lyrata HOM05D006305 ORTHO05D007984 5.1e-118 428.7 390 60.8
CDE11G1040 Ceratophyllum demersum HOM05D006305 ORTHO05D007984 3.7e-116 422.5 375 59.5
Prupe.6G329400 Prunus persica HOM05D006305 ORTHO05D007984 3.7e-116 422.5 275 74.9
ATR0620G066 Amborella trichopoda HOM05D006305 ORTHO05D007984 9.0e-115 417.9 396 59.6
AUR62000888 Chenopodium quinoa HOM05D006305 ORTHO05D007984 1.0e-113 414.5 287 72.5
AUR62005086 Chenopodium quinoa HOM05D006305 ORTHO05D007984 2.9e-113 412.9 286 72.7
Ciclev10001229m.g Citrus clementina HOM05D006305 ORTHO05D007984 2.9e-113 412.9 394 59.9
HPP92_015091 Vanilla planifolia HOM05D006305 ORTHO05D007984 2.9e-113 412.9 391 58.3
THA.LOC104820089 Tarenaya hassleriana HOM05D006305 ORTHO05D007984 4.9e-113 412.1 420 57.4
Aa31LG5G15590 Aethionema arabicum HOM05D006305 ORTHO05D007984 3.2e-112 409.5 418 56.7
unitig_746.g26625 Utricularia gibba HOM05D006305 ORTHO05D007984 3.5e-111 406.0 362 60.5
BcaC05g30019 Brassica carinata HOM05D006305 ORTHO05D007984 6.7e-110 401.7 394 57.1
PSO782G4398 Papaver somniferum HOM05D006305 ORTHO05D007984 5.7e-109 398.7 402 57.7
COL.COLO4_19840 Corchorus olitorius HOM05D006305 ORTHO05D007984 6.3e-108 395.2 220 83.6
Nn3g18889 Nelumbo nucifera HOM05D006305 ORTHO05D007984 1.8e-107 393.7 284 74.6
PSO063G7033 Papaver somniferum HOM05D006305 ORTHO05D007984 3.1e-107 392.9 386 59.1
MBI04_g21739_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 1.5e-106 390.6 275 72.0
MELO3C025022.2 Cucumis melo HOM05D006305 ORTHO05D007984 3.8e-105 386.0 304 67.1
Zm00001eb043410 Zea mays HOM05D006305 ORTHO05D007984 5.0e-105 385.6 398 57.5
Cfa006552 Carpinus fangiana HOM05D006305 ORTHO05D007984 6.5e-105 385.2 294 70.1
CsaV3_6G002610 Cucumis sativus L. HOM05D006305 ORTHO05D007984 1.2e-103 380.9 293 66.6
Sed0018566 Sechium edule HOM05D006305 ORTHO05D007984 1.0e-102 377.9 299 64.2
Os10g0518900 Oryza sativa ssp. japonica HOM05D006305 ORTHO05D007984 6.7e-102 375.2 276 67.8
Haze_04230 Corylus avellana HOM05D006305 ORTHO05D007984 2.4e-99 366.7 407 55.3
Pp3c6_29610 Physcomitrium patens HOM05D006305 ORTHO05D007984 2.1e-95 353.6 337 55.5
SMO146G0211 Selaginella moellendorffii HOM05D006305 ORTHO05D007984 6.9e-91 338.6 201 79.6
Mapoly0128s0010 Marchantia polymorpha HOM05D006305 ORTHO05D007984 4.5e-90 335.9 421 50.8
CBR_g4857 Chara braunii HOM05D006305 ORTHO05D007984 7.7e-90 335.1 266 62.4
AT3G05210 Arabidopsis thaliana HOM05D006305 ORTHO05D007984 4.2e-88 329.3 285 61.1
Ciclev10002028m.g Citrus clementina HOM05D006305 ORTHO05D007984 4.2e-88 329.3 254 68.1
TPR.G22794 Trifolium pratense HOM05D006305 ORTHO05D007984 8.8e-86 321.6 244 66.8
Duzib106G1918 Durio zibethinus HOM05D006305 ORTHO05D007984 1.5e-85 320.9 399 55.1
Hma1.2p1_0666F.1_g199530 Hydrangea macrophylla HOM05D006305 ORTHO05D007984 1.7e-81 307.4 198 76.3
Sc16g0008400 Simmondsia chinensis HOM05D006305 ORTHO05D007984 2.9e-81 306.6 236 67.8
Ciclev10003828m.g Citrus clementina HOM05D006305 ORTHO05D007984 1.5e-80 304.3 308 55.2
Cpa.g.sc1183.2 Carica papaya HOM05D006305 ORTHO05D007984 2.2e-76 290.4 400 47.8
MBI04_g44620_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 1.5e-69 267.7 140 88.6
CARHR079550 Cardamine hirsuta HOM05D006305 ORTHO05D007984 1.7e-65 254.2 139 83.5
AagrBONN_evm.TU.Sc2ySwM_369.531 Anthoceros agrestis HOM05D006305 ORTHO05D007984 1.5e-64 251.1 260 52.3
Cre03.g196651 Chlamydomonas reinhardtii HOM05D006305 ORTHO05D007984 1.0e-62 245.0 225 53.3
Ciclev10003460m.g Citrus clementina HOM05D006305 ORTHO05D007984 1.3e-57 228.0 257 52.9
Ciclev10003373m.g Citrus clementina HOM05D006305 ORTHO05D007984 8.6e-57 225.3 282 49.3
PRCOL_00003423 Prasinoderma coloniale HOM05D006305 ORTHO05D007984 1.1e-43 181.8 191 46.1
Cfa026476 Carpinus fangiana HOM05D006305 ORTHO05D007984 6.2e-39 166.0 307 34.9
SalBow6G3462 Salvia bowleyana HOM05D006305 ORTHO05D007984 4.7e-31 139.8 147 55.8
MCO01G606 Micromonas commoda HOM05D006305 ORTHO05D007984 1.1e-30 138.7 194 36.1
TPR.G7405 Trifolium pratense HOM05D006305 ORTHO05D007984 2.0e-29 134.4 170 48.2
Glyma.20G232002 Glycine max HOM05D006305 ORTHO05D007984 2.6e-21 107.5 85 65.9
Pp3c16_18520 Physcomitrium patens HOM05D006305 ORTHO05D007984 2.4e-11 74.3 158 34.8
Cpa.g.sc48.16 Carica papaya HOM05D006305 ORTHO05D007984 4.6e-10 70.1 105 43.8
MBI04_g33407_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 2.5e-08 64.3 130 41.5
MELO3C033326.2 Cucumis melo HOM05D006305 ORTHO05D168382 4.8e-07 60.1 34 76.5


User provided reference genes

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