Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc03g082990.3 Solanum lycopersicum HOM05D005626 ORTHO05D007372 8.4e-273 943.3 569 100.0
Sopen03g022800 Solanum pennellii HOM05D005626 ORTHO05D007372 4.0e-267 924.5 569 98.6
Nitab4.5_0005491g0050 Nicotiana tabacum HOM05D005626 ORTHO05D007372 1.3e-217 760.0 578 83.2
CAN.G481.28 Capsicum annuum HOM05D005626 ORTHO05D007372 1.9e-216 756.1 570 83.0
Peaxi162Scf00740g00226 Petunia axillaris HOM05D005626 ORTHO05D007372 9.8e-181 637.5 484 84.7
Cc02_g01370 Coffea canephora HOM05D005626 ORTHO05D007372 3.9e-145 519.2 545 60.6
Migut.F00199 Erythranthe guttata HOM05D005626 ORTHO05D007372 7.1e-139 498.4 527 62.0
Atru.chr12.2245_Atru.chr12.2244 Acer truncatum HOM05D005626 ORTHO05D007372 4.8e-135 485.7 490 65.3
Oeu010695.1 Olea europaea HOM05D005626 ORTHO05D007372 4.6e-130 469.2 533 62.1
Manes.06G012351 Manihot esculenta HOM05D005626 ORTHO05D007372 9.7e-128 461.5 577 54.2
Dinv29256 Davidia involucrata HOM05D005626 ORTHO05D007372 3.1e-118 429.9 586 57.7
CANSAT21G0821 Cannabis sativa HOM05D005626 ORTHO05D007372 1.7e-116 424.1 468 57.3
MBI07_g24765_MAGBIO Magnolia biondii HOM05D005626 ORTHO05D007372 6.5e-116 422.2 557 48.3
SalBow4G1489 Salvia bowleyana HOM05D005626 ORTHO05D007372 4.5e-109 399.4 427 59.3
Sabra15G0008900 Salix brachista HOM05D005626 ORTHO05D007372 3.2e-107 393.3 498 58.6
EL10Ac3g05260 Beta vulgaris HOM05D005626 ORTHO05D007372 5.5e-107 392.5 526 52.9
unitig_92.g28249 Utricularia gibba HOM05D005626 ORTHO05D007372 7.2e-107 392.1 480 54.6
CSS0044766 Camellia sinensis var. sinensis HOM05D005626 ORTHO05D007372 1.6e-106 391.0 543 56.5
Cfa016215 Carpinus fangiana HOM05D005626 ORTHO05D007372 2.7e-106 390.2 578 49.1
Potri.015G010800 Populus trichocarpa HOM05D005626 ORTHO05D007372 2.3e-105 387.1 581 52.2
CDE02G3804 Ceratophyllum demersum HOM05D005626 ORTHO05D007372 2.0e-104 384.0 463 55.5
Actinidia18659 Actinidia chinensis HOM05D005626 ORTHO05D007372 3.3e-104 383.3 583 50.6
Eucgr.A01448 Eucalyptus grandis HOM05D005626 ORTHO05D007372 5.7e-104 382.5 503 52.9
MSTRG.27018 Avicennia marina HOM05D005626 ORTHO05D007372 7.4e-104 382.1 455 58.7
QL09p007984 Quercus lobata HOM05D005626 ORTHO05D007372 4.1e-102 376.3 471 58.8
GSVIVG01038569001 Vitis vinifera HOM05D005626 ORTHO05D007372 4.1e-102 376.3 539 48.8
AUR62006074 Chenopodium quinoa HOM05D005626 ORTHO05D007372 2.2e-100 370.5 572 49.1
Gohir.D09G179900 Gossypium hirsutum HOM05D005626 ORTHO05D007372 2.9e-100 370.2 508 53.3
arahy.Tifrunner.gnm1.ann1.1DU7LF Arachis hypogaea HOM05D005626 ORTHO05D007372 6.5e-100 369.0 490 50.4
PGR042G1168 Punica granatum HOM05D005626 ORTHO05D007372 4.2e-99 366.3 548 53.6
Prupe.2G313200 Prunus persica HOM05D005626 ORTHO05D007372 6.1e-98 362.5 524 48.5
Thecc.03G201200 Theobroma cacao HOM05D005626 ORTHO05D007372 8.0e-98 362.1 507 52.9
Gorai.006G201900 Gossypium raimondii HOM05D005626 ORTHO05D007372 2.3e-97 360.5 540 46.9
PGSC0003DMG400018528 Solanum tuberosum HOM05D005626 ORTHO05D007372 2.3e-97 360.5 211 98.1
TPR.G33639 Trifolium pratense HOM05D005626 ORTHO05D007372 3.0e-97 360.1 531 53.7
THA.LOC104799967 Tarenaya hassleriana HOM05D005626 ORTHO05D007372 8.8e-97 358.6 506 48.4
CSS0003989 Camellia sinensis var. sinensis HOM05D005626 ORTHO05D007372 2.0e-96 357.5 649 42.2
arahy.Tifrunner.gnm1.ann1.ULB6CG Arachis hypogaea HOM05D005626 ORTHO05D007372 2.2e-95 354.0 490 47.6
Lj8A623T21 Lonicera japonica HOM05D005626 ORTHO05D007372 4.8e-95 352.8 466 57.9
Ciclev10020013m.g Citrus clementina HOM05D005626 ORTHO05D007372 1.8e-94 350.9 468 54.9
TAR375G0360 Trochodendron aralioides HOM05D005626 ORTHO05D007372 9.1e-94 348.6 593 47.7
Hund11648 Selenicereus undatus HOM05D005626 ORTHO05D007372 1.6e-93 347.8 489 51.3
FAN06G4319 Fragaria x ananassa HOM05D005626 ORTHO05D007372 2.7e-93 347.1 490 54.9
Manes.06G011400 Manihot esculenta HOM05D005626 ORTHO05D007372 2.7e-93 347.1 454 54.2
FvH4_7g31990 Fragaria vesca HOM05D005626 ORTHO05D007372 1.0e-92 345.1 504 54.0
Lj1g0019302 Lotus japonicus HOM05D005626 ORTHO05D007372 1.7e-92 344.4 520 49.6
Hma1.2p1_2307F.1_g319430 Hydrangea macrophylla HOM05D005626 ORTHO05D007372 2.9e-92 343.6 556 51.6
TWI39G0896 Tripterygium wilfordii HOM05D005626 ORTHO05D007372 3.8e-92 343.2 468 57.5
Hma1.2p1_0591F.1_g185250 Hydrangea macrophylla HOM05D005626 ORTHO05D007372 6.5e-92 342.4 567 50.3
ClCG01G000360 Citrullus lanatus HOM05D005626 ORTHO05D007372 1.5e-91 341.3 474 56.1
Lalb_Chr08g0240121 Lupinus albus HOM05D005626 ORTHO05D007372 1.5e-91 341.3 465 55.9
MD01G1222800 Malus domestica HOM05D005626 ORTHO05D007372 2.5e-91 340.5 578 47.4
AUR62035551 Chenopodium quinoa HOM05D005626 ORTHO05D007372 3.2e-91 340.1 582 44.2
FAN10G2571 Fragaria x ananassa HOM05D005626 ORTHO05D007372 3.2e-91 340.1 511 53.4
CsaV3_5G000430 Cucumis sativus L. HOM05D005626 ORTHO05D007372 7.2e-91 339.0 574 50.5
CiPaw.06G045100 Carya illinoinensis HOM05D005626 ORTHO05D007372 5.2e-89 332.8 586 46.8
Sc25g0000940 Simmondsia chinensis HOM05D005626 ORTHO05D007372 5.2e-89 332.8 425 55.3
FAN03G2656 Fragaria x ananassa HOM05D005626 ORTHO05D007032 1.2e-88 331.6 509 48.9
arahy.Tifrunner.gnm1.ann1.DCMH6Q Arachis hypogaea HOM05D005626 ORTHO05D007372 2.0e-88 330.9 455 48.6
RcHm_v2.0_Chr1g0381501 Rosa chinensis HOM05D005626 ORTHO05D007372 2.0e-88 330.9 466 55.4
MELO3C005892.2 Cucumis melo HOM05D005626 ORTHO05D007372 7.5e-88 328.9 475 54.9
arahy.Tifrunner.gnm1.ann1.CHU3M4 Arachis hypogaea HOM05D005626 ORTHO05D007372 2.8e-87 327.0 468 49.6
PSO063G0511 Papaver somniferum HOM05D005626 ORTHO05D007372 2.4e-86 323.9 463 52.5
PSO170G4344 Papaver somniferum HOM05D005626 ORTHO05D007372 5.4e-86 322.8 514 51.9
QL09p008055 Quercus lobata HOM05D005626 ORTHO05D007372 5.4e-86 322.8 416 45.4
HPP92_005288 Vanilla planifolia HOM05D005626 ORTHO05D007372 1.2e-85 321.6 398 54.5
Ca_16720_v3 Cicer arietinum L. HOM05D005626 ORTHO05D007372 4.5e-85 319.7 538 50.7
CSS0000100 Camellia sinensis var. sinensis HOM05D005626 ORTHO05D007372 1.5e-83 314.7 512 45.5
Haze_00226 Corylus avellana HOM05D005626 ORTHO05D007372 7.2e-83 312.4 437 51.7
MBI07_g43862_MAGBIO Magnolia biondii HOM05D005626 ORTHO05D007372 1.6e-82 311.2 472 41.5
Glyma.04G234300 Glycine max HOM05D005626 ORTHO05D007372 1.8e-81 307.8 534 50.0
Ah.07g205460 Amaranthus hybridus HOM05D005626 ORTHO05D007372 4.0e-81 306.6 602 43.2
Psat5g076080 Pisum sativum HOM05D005626 ORTHO05D007372 6.8e-81 305.8 572 48.8
AT5G53080 Arabidopsis thaliana HOM05D005626 ORTHO05D007372 8.9e-81 305.4 504 45.2
Nn1g00302 Nelumbo nucifera HOM05D005626 ORTHO05D007372 8.9e-81 305.4 542 45.9
Phvul.009G051300 Phaseolus vulgaris HOM05D005626 ORTHO05D007372 3.4e-80 303.5 469 54.4
Duzib084G0104 Durio zibethinus HOM05D005626 ORTHO05D007372 8.3e-79 298.9 590 44.9
COL.COLO4_16792 Corchorus olitorius HOM05D005626 ORTHO05D007032 1.1e-78 298.5 555 46.5
Sed0007830 Sechium edule HOM05D005626 ORTHO05D007372 1.1e-78 298.5 582 47.6
VMungo1309G2515 Vigna mungo HOM05D005626 ORTHO05D007372 1.8e-78 297.7 482 48.8
BcaB05g22010 Brassica carinata HOM05D005626 ORTHO05D007372 4.5e-77 293.1 527 36.8
Lsat_1_v5_gn_9_49841 Lactuca sativa HOM05D005626 ORTHO05D007372 1.3e-76 291.6 538 45.0
Aa31LG3G9390 Aethionema arabicum HOM05D005626 ORTHO05D007372 1.7e-76 291.2 512 45.1
Aqoxy5G04311 Aquilegia oxysepala HOM05D005626 ORTHO05D007372 1.9e-75 287.7 536 42.9
AL8G27710 Arabidopsis lyrata HOM05D005626 ORTHO05D007372 4.3e-75 286.6 506 44.7
Sp6g15250 Schrenkiella parvula HOM05D005626 ORTHO05D007372 1.6e-74 284.6 468 46.8
Carub.0008s1328 Capsella rubella HOM05D005626 ORTHO05D007372 3.6e-74 283.5 506 43.1
Thhalv10013148m.g Eutrema salsugineum HOM05D005626 ORTHO05D007372 1.4e-73 281.6 496 45.4
ECA232G0910 Erigeron canadensis HOM05D005626 ORTHO05D007372 4.0e-73 280.0 538 45.7
DCAR_010593 Daucus carota HOM05D005626 ORTHO05D007372 2.0e-72 277.7 214 67.8
Medtr3g091780 Medicago truncatula HOM05D005626 ORTHO05D007372 9.8e-72 275.4 553 47.4
Cpa.g.sc3.101 Carica papaya HOM05D005626 ORTHO05D007372 1.7e-71 274.6 513 43.9
Gohir.A09G185000 Gossypium hirsutum HOM05D005626 ORTHO05D007372 4.9e-71 273.1 297 66.7
A02p11310 Brassica napus HOM05D005626 ORTHO05D007372 3.2e-70 270.4 525 42.9
C02p18690 Brassica napus HOM05D005626 ORTHO05D007372 4.1e-70 270.0 509 43.4
BolC2t08014H Brassica oleracea HOM05D005626 ORTHO05D007372 5.4e-70 269.6 506 42.9
SGA_v2.0_scaffold192G40528 Striga asiatica HOM05D005626 ORTHO05D007032 7.0e-70 269.2 436 51.4
BraA02t06193Z Brassica rapa HOM05D005626 ORTHO05D007372 2.0e-69 267.7 495 43.6
HanXRQChr15g0485681 Helianthus annuus HOM05D005626 ORTHO05D007372 2.0e-69 267.7 547 46.6
CARHR266100 Cardamine hirsuta HOM05D005626 ORTHO05D007372 9.5e-67 258.8 568 40.1
BcaC03g14458 Brassica carinata HOM05D005626 ORTHO05D007372 4.7e-66 256.5 502 42.8
BcaB05g22007 Brassica carinata HOM05D005626 ORTHO05D007372 4.4e-64 250.0 494 40.1
ATR0730G125 Amborella trichopoda HOM05D005626 ORTHO05D007372 7.8e-61 239.2 344 53.8
Lj1A1021T49 Lonicera japonica HOM05D005626 ORTHO05D007372 9.5e-59 232.3 399 48.9
FAN10G0040 Fragaria x ananassa HOM05D005626 ORTHO05D009683 7.5e-56 222.6 420 44.0
Mapoly0045s0029 Marchantia polymorpha HOM05D005626 ORTHO05D007372 3.3e-43 180.6 338 45.3
Mapoly0001s0084 Marchantia polymorpha HOM05D005626 ORTHO05D007372 7.3e-43 179.5 458 32.3
Manes.06G011750 Manihot esculenta HOM05D005626 ORTHO05D007372 4.4e-40 170.2 203 64.0
Manes.06G012101 Manihot esculenta HOM05D005626 ORTHO05D007372 7.1e-38 162.9 303 47.2
Glyma.06G130267 Glycine max HOM05D005626 ORTHO05D007372 2.5e-35 154.5 109 69.7
Glyma.06G130333 Glycine max HOM05D005626 ORTHO05D007372 6.2e-34 149.8 129 58.9
MBI19_g14786_MAGBIO Magnolia biondii HOM05D005626 ORTHO05D007372 8.1e-34 149.4 150 50.7
Pp3c5_16230 Physcomitrium patens HOM05D005626 ORTHO05D007372 4.2e-30 137.1 333 29.4
QL09p008133 Quercus lobata HOM05D005626 ORTHO05D007372 1.2e-29 135.6 82 81.7
Pp3c16_9300 Physcomitrium patens HOM05D005626 ORTHO05D007372 1.4e-25 122.1 359 27.3
MBI19_g14787_MAGBIO Magnolia biondii HOM05D005626 ORTHO05D007372 3.1e-25 120.9 96 58.3
BcaB01g04215 Brassica carinata HOM05D005626 ORTHO05D007372 6.9e-25 119.8 151 43.0
FAN10G4199 Fragaria x ananassa HOM05D005626 ORTHO05D007372 7.9e-21 106.3 121 65.3
BcaB01g04214 Brassica carinata HOM05D005626 ORTHO05D007372 1.0e-20 105.9 154 43.5
Pp3c5_16240 Physcomitrium patens HOM05D005626 ORTHO05D007372 1.3e-20 105.5 322 39.4
CSS0006573 Camellia sinensis var. sinensis HOM05D005626 ORTHO05D007372 4.3e-19 100.5 85 60.0
MD07G1293400 Malus domestica HOM05D005626 ORTHO05D007372 2.1e-18 98.2 121 48.8
AagrBONN_evm.TU.Sc2ySwM_369.443 Anthoceros agrestis HOM05D005626 ORTHO05D007372 5.8e-16 90.1 160 35.0
Pp3c23_14930 Physcomitrium patens HOM05D005626 ORTHO05D007372 1.0e-12 79.3 152 34.2
Lj1C1019T10 Lonicera japonica HOM05D005626 ORTHO05D007372 1.9e-11 75.1 84 47.6
Pp3c8_12740 Physcomitrium patens HOM05D005626 ORTHO05D007372 4.3e-11 73.9 149 28.9
Actinidia06140 Actinidia chinensis HOM05D005626 ORTHO05D007372 9.7e-11 72.8 60 56.7
SEGI_36936 Sequoiadendron giganteum HOM05D005626 ORTHO05D007372 9.7e-11 72.8 70 50.0
Cfa019813 Carpinus fangiana HOM05D005626 ORTHO05D007372 3.7e-10 70.9 62 56.5
QL09p008114 Quercus lobata HOM05D005626 ORTHO05D007372 1.1e-09 69.3 53 66.0
MD07G1293500 Malus domestica HOM05D005626 ORTHO05D007372 2.6e-08 64.7 56 57.1
Lj1A1021T50 Lonicera japonica HOM05D005626 ORTHO05D007372 5.5e-06 57.0 163 35.0
Peaxi162Scf00740g00238 Petunia axillaris HOM05D005626 ORTHO05D306929 5.5e-06 57.0 112 40.2


User provided reference genes

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