Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0022381 Sechium edule HOM05D002121 ORTHO05D008891 3.0e-168 595.1 310 100.0
MELO3C010637.2 Cucumis melo HOM05D002121 ORTHO05D008891 4.6e-124 448.4 324 75.6
CsaV3_6G034200 Cucumis sativus L. HOM05D002121 ORTHO05D008891 8.1e-121 437.6 323 74.0
ClCG08G005910 Citrullus lanatus HOM05D002121 ORTHO05D008891 1.2e-111 407.1 323 71.2
CiPaw.15G034100 Carya illinoinensis HOM05D002121 ORTHO05D008891 2.7e-108 396.0 300 68.0
Haze_17516 Corylus avellana HOM05D002121 ORTHO05D008891 7.9e-108 394.4 309 66.7
RcHm_v2.0_Chr6g0296321 Rosa chinensis HOM05D002121 ORTHO05D008891 6.7e-107 391.3 291 68.0
Prupe.1G492700 Prunus persica HOM05D002121 ORTHO05D008891 1.9e-106 389.8 312 65.7
FvH4_2g27490 Fragaria vesca HOM05D002121 ORTHO05D008891 1.3e-105 387.1 302 65.2
FAN15G1848 Fragaria x ananassa HOM05D002121 ORTHO05D008891 1.3e-105 387.1 302 65.2
FAN20G0023 Fragaria x ananassa HOM05D002121 ORTHO05D008891 2.2e-105 386.3 302 65.2
FAN27G1590 Fragaria x ananassa HOM05D002121 ORTHO05D008891 1.1e-104 384.0 275 69.1
Cpa.g.sc64.123 Carica papaya HOM05D002121 ORTHO05D008891 1.8e-104 383.3 297 67.0
CANSAT25G1674 Cannabis sativa HOM05D002121 ORTHO05D008891 4.1e-104 382.1 249 75.5
Atru.chr13.1527 Acer truncatum HOM05D002121 ORTHO05D008891 6.9e-104 381.3 253 72.3
COL.COLO4_37918 Corchorus olitorius HOM05D002121 ORTHO05D008891 6.9e-104 381.3 295 65.8
Gohir.A05G237100 Gossypium hirsutum HOM05D002121 ORTHO05D008891 1.2e-103 380.6 311 65.9
Gorai.009G248000 Gossypium raimondii HOM05D002121 ORTHO05D008891 1.5e-103 380.2 299 65.6
Lj1g0016880 Lotus japonicus HOM05D002121 ORTHO05D008891 2.6e-103 379.4 298 66.1
Rhsim11G0070100 Rhododendron simsii HOM05D002121 ORTHO05D008891 2.6e-103 379.4 297 66.0
Thecc.08G129600 Theobroma cacao HOM05D002121 ORTHO05D008891 2.6e-103 379.4 265 70.6
CSS0024419 Camellia sinensis var. sinensis HOM05D002121 ORTHO05D008891 3.4e-103 379.0 311 63.7
QL09p033741 Quercus lobata HOM05D002121 ORTHO05D008891 4.5e-103 378.6 275 67.6
Gohir.D05G239200 Gossypium hirsutum HOM05D002121 ORTHO05D008891 7.6e-103 377.9 265 69.8
Ciclev10001657m.g Citrus clementina HOM05D002121 ORTHO05D008891 1.3e-102 377.1 276 69.6
Dinv27282 Davidia involucrata HOM05D002121 ORTHO05D008891 1.7e-102 376.7 249 73.9
Duzib093G0305 Durio zibethinus HOM05D002121 ORTHO05D008891 2.2e-102 376.3 315 63.8
arahy.Tifrunner.gnm1.ann1.IC0JL2 Arachis hypogaea HOM05D002121 ORTHO05D008891 3.8e-102 375.6 317 62.1
arahy.Tifrunner.gnm1.ann1.VL2KU3 Arachis hypogaea HOM05D002121 ORTHO05D008891 1.1e-101 374.0 318 62.3
Lalb_Chr23g0271121 Lupinus albus HOM05D002121 ORTHO05D008891 1.4e-101 373.6 249 72.7
Hund17311 Selenicereus undatus HOM05D002121 ORTHO05D008891 1.4e-101 373.6 316 63.0
Ca_16577_v3 Cicer arietinum L. HOM05D002121 ORTHO05D008891 3.2e-101 372.5 298 64.8
Cc10_g12290 Coffea canephora HOM05D002121 ORTHO05D008891 4.2e-101 372.1 297 61.3
Eucgr.F03811 Eucalyptus grandis HOM05D002121 ORTHO05D008891 5.5e-101 371.7 300 64.3
Actinidia03419 Actinidia chinensis HOM05D002121 ORTHO05D008891 7.2e-101 371.3 249 72.3
Manes.02G166400 Manihot esculenta HOM05D002121 ORTHO05D008891 7.2e-101 371.3 299 64.5
Phvul.009G127600 Phaseolus vulgaris HOM05D002121 ORTHO05D008891 7.2e-101 371.3 291 65.6
TWI32G0996 Tripterygium wilfordii HOM05D002121 ORTHO05D008891 1.2e-100 370.5 304 64.5
Nn1g08892 Nelumbo nucifera HOM05D002121 ORTHO05D008891 1.6e-100 370.2 316 63.0
VMungo1309G2347 Vigna mungo HOM05D002121 ORTHO05D008891 2.7e-100 369.4 255 69.8
TAR376G0507 Trochodendron aralioides HOM05D002121 ORTHO05D008891 1.3e-99 367.1 251 71.3
Lj7A344T50 Lonicera japonica HOM05D002121 ORTHO05D008891 1.8e-99 366.7 293 63.8
Nitab4.5_0000111g0140 Nicotiana tabacum HOM05D002121 ORTHO05D008891 2.3e-99 366.3 320 60.9
THA.LOC104800213 Tarenaya hassleriana HOM05D002121 ORTHO05D008891 1.1e-98 364.0 250 72.0
Psat5g086080 Pisum sativum HOM05D002121 ORTHO05D008891 1.5e-98 363.6 249 70.3
DCAR_014379 Daucus carota HOM05D001700 ORTHO05D002131 1.9e-98 363.2 301 64.1
PGSC0003DMG400009246 Solanum tuberosum HOM05D002121 ORTHO05D008891 3.3e-98 362.5 294 63.6
MSTRG.25368 Avicennia marina HOM05D002121 ORTHO05D008891 4.3e-98 362.1 290 64.1
CAN.G1391.3 Capsicum annuum HOM05D002121 ORTHO05D008891 4.3e-98 362.1 251 70.1
DCAR_002302 Daucus carota HOM05D002121 ORTHO05D008891 5.7e-98 361.7 299 64.9
Migut.C01114 Erythranthe guttata HOM05D002121 ORTHO05D008891 5.7e-98 361.7 315 60.3
Thhalv10008051m.g Eutrema salsugineum HOM05D002121 ORTHO05D008891 5.7e-98 361.7 299 62.2
vmacro00852 Vaccinium macrocarpon HOM05D002121 ORTHO05D008891 5.7e-98 361.7 299 63.5
AT1G21710 Arabidopsis thaliana HOM05D002121 ORTHO05D008891 1.7e-97 360.1 250 69.6
Carub.0001s2115 Capsella rubella HOM05D002121 ORTHO05D008891 1.7e-97 360.1 297 62.6
Sopen11g009470 Solanum pennellii HOM05D002121 ORTHO05D008891 1.7e-97 360.1 305 63.3
AL1G34880 Arabidopsis lyrata HOM05D002121 ORTHO05D008891 2.2e-97 359.8 301 62.1
Solyc11g018510.2 Solanum lycopersicum HOM05D002121 ORTHO05D008891 2.2e-97 359.8 302 63.2
AUR62002267 Chenopodium quinoa HOM05D002121 ORTHO05D008891 2.8e-97 359.4 322 58.4
BcaB07g32168 Brassica carinata HOM05D002121 ORTHO05D008891 3.7e-97 359.0 251 70.5
Glyma.06G115500 Glycine max HOM05D002121 ORTHO05D008891 4.8e-97 358.6 310 61.6
Aqoxy6G00263 Aquilegia oxysepala HOM05D002121 ORTHO05D008891 8.2e-97 357.8 252 69.4
BcaB03g12775 Brassica carinata HOM05D002121 ORTHO05D008891 8.2e-97 357.8 295 63.4
FAN24G0685 Fragaria x ananassa HOM05D002121 ORTHO05D008891 1.8e-96 356.7 302 61.9
SGA_v2.0_scaffold52G18936 Striga asiatica HOM05D002121 ORTHO05D008891 1.8e-96 356.7 310 58.7
BcaC05g26090 Brassica carinata HOM05D002121 ORTHO05D008891 3.1e-96 355.9 295 62.7
A06p17800 Brassica napus HOM05D002121 ORTHO05D004000 3.1e-96 355.9 295 63.4
BraA06t24872Z Brassica rapa HOM05D002121 ORTHO05D008891 3.1e-96 355.9 295 63.4
CARHR022070 Cardamine hirsuta HOM05D002121 ORTHO05D008891 3.1e-96 355.9 304 61.8
Sp1g19270 Schrenkiella parvula HOM05D002121 ORTHO05D008891 6.9e-96 354.8 297 62.0
Aa31LG7G5680 Aethionema arabicum HOM05D002121 ORTHO05D008891 1.2e-95 354.0 297 61.3
BolC5t30768H Brassica oleracea HOM05D002121 ORTHO05D004000 2.0e-95 353.2 294 62.6
Medtr3g088510 Medicago truncatula HOM05D002121 ORTHO05D008891 2.0e-95 353.2 298 60.7
EL10Ac1g00004 Beta vulgaris HOM05D002121 ORTHO05D008891 3.4e-95 352.4 304 60.9
Ah.05g171490 Amaranthus hybridus HOM05D002121 ORTHO05D008891 4.5e-95 352.1 307 59.9
C05p20690 Brassica napus HOM05D002121 ORTHO05D004000 2.2e-94 349.7 295 62.7
Sc15g0002960 Simmondsia chinensis HOM05D002121 ORTHO05D008891 2.2e-94 349.7 241 71.4
HanXRQChr05g0148721 Helianthus annuus HOM05D002121 ORTHO05D008891 3.8e-94 349.0 291 59.1
Potri.005G180700 Populus trichocarpa HOM05D002121 ORTHO05D008891 8.5e-94 347.8 304 58.9
Hma1.2p1_0612F.1_g188790 Hydrangea macrophylla HOM05D002121 ORTHO05D008891 1.9e-93 346.7 249 67.9
Lsat_1_v5_gn_6_97640 Lactuca sativa HOM05D002121 ORTHO05D008891 1.2e-92 344.0 306 57.8
HPP92_011391 Vanilla planifolia HOM05D002121 ORTHO05D008891 5.1e-91 338.6 321 56.4
ATR0709G083 Amborella trichopoda HOM05D002121 ORTHO05D008891 6.7e-91 338.2 282 63.5
MBI06_g04552_MAGBIO Magnolia biondii HOM05D002121 ORTHO05D008891 2.6e-90 336.3 251 67.7
PSO170G0582 Papaver somniferum HOM05D002121 ORTHO05D008891 2.6e-90 336.3 257 65.4
CDE08G1413 Ceratophyllum demersum HOM05D002121 ORTHO05D008891 5.3e-88 328.6 260 62.7
Peaxi162Scf00310g00513 Petunia axillaris HOM05D002121 ORTHO05D008891 7.7e-87 324.7 300 58.7
Zm00001eb243580 Zea mays HOM05D002121 ORTHO05D008891 1.9e-85 320.1 319 55.2
Os02g0552600 Oryza sativa ssp. japonica HOM05D002121 ORTHO05D008891 2.3e-83 313.2 258 63.2
Dinv14647 Davidia involucrata HOM05D002121 ORTHO05D008891 1.0e-78 297.7 212 69.8
SEGI_00220 Sequoiadendron giganteum HOM05D002121 ORTHO05D008891 1.7e-78 297.0 253 58.1
SEGI_39313 Sequoiadendron giganteum HOM05D002121 ORTHO05D008891 1.7e-78 297.0 253 58.1
Mapoly0066s0098 Marchantia polymorpha HOM05D002121 ORTHO05D008891 1.5e-77 293.9 291 52.6
Pp3c15_7530 Physcomitrium patens HOM05D002121 ORTHO05D008891 3.3e-74 282.7 251 55.0
SMO367G0241 Selaginella moellendorffii HOM05D002121 ORTHO05D008891 4.8e-73 278.9 277 52.3
AagrBONN_evm.TU.Sc2ySwM_228.2791 Anthoceros agrestis HOM05D002121 ORTHO05D008891 1.4e-67 260.8 255 53.3
AUR62015427 Chenopodium quinoa HOM05D002121 ORTHO05D008891 8.8e-67 258.1 319 48.0
Sabra05G0136700 Salix brachista HOM05D002121 ORTHO05D008891 5.7e-66 255.4 165 70.9
CAN.G1347.2 Capsicum annuum HOM05D002121 ORTHO05D008891 3.0e-59 233.0 303 46.2
unitig_699.g19768 Utricularia gibba HOM05D002121 ORTHO05D003088 3.0e-59 233.0 292 44.9
Sc15g0002990 Simmondsia chinensis HOM05D002121 ORTHO05D008891 6.3e-57 225.3 170 67.6
GSVIVG01008832001 Vitis vinifera HOM05D002121 ORTHO05D008891 2.8e-52 209.9 116 80.2
Cre01.g063632 Chlamydomonas reinhardtii HOM05D002121 ORTHO05D008891 7.0e-48 195.3 361 35.5
SalBow7G2694 Salvia bowleyana HOM05D002121 ORTHO05D008891 7.0e-48 195.3 116 75.9
MCO08G296 Micromonas commoda HOM05D002121 ORTHO05D008891 2.7e-47 193.4 296 38.9
BcaB03g12777 Brassica carinata HOM05D002121 ORTHO05D008891 2.3e-46 190.3 117 76.1
Migut.C00404 Erythranthe guttata HOM05D002121 ORTHO05D008891 1.8e-43 180.6 197 53.3
MBI06_g44498_MAGBIO Magnolia biondii HOM05D002121 ORTHO05D008891 2.6e-42 176.8 219 48.4
ECA246G4340 Erigeron canadensis HOM05D002121 ORTHO05D008891 1.7e-41 174.1 108 72.2
Oeu032210.1 Olea europaea HOM05D002121 ORTHO05D008891 6.2e-28 129.0 72 79.2
RcHm_v2.0_Chr2g0118881 Rosa chinensis HOM05D002121 ORTHO05D008891 2.0e-26 124.0 95 64.2
Sc15g0002970 Simmondsia chinensis HOM05D002121 ORTHO05D008891 3.5e-15 86.7 43 88.4
PRCOL_00001975 Prasinoderma coloniale HOM05D002121 ORTHO05D008891 3.9e-14 83.2 189 32.3
HanXRQChr15g0473481 Helianthus annuus HOM05D002121 ORTHO05D008891 4.5e-10 69.7 35 77.1
Cfa022494 Carpinus fangiana HOM05D002121 ORTHO05D008891 1.3e-09 68.2 130 36.9
CBR_g3761 Chara braunii HOM05D002121 ORTHO05D008891 6.4e-09 65.9 192 28.1
PRCOL_00005231 Prasinoderma coloniale HOM05D007129 ORTHO05D008680 7.9e-07 58.9 147 30.6
PRCOL_00004066 Prasinoderma coloniale HOM05D002121 ORTHO05D008891 1.3e-06 58.2 74 43.2
Oeu016337.1 Olea europaea HOM05D007129 ORTHO05D008680 5.1e-06 56.2 47 53.2
Hund02711 Selenicereus undatus HOM05D007129 ORTHO05D008680 5.1e-06 56.2 100 37.0
Sopen03g032940 Solanum pennellii HOM05D007129 ORTHO05D008680 5.1e-06 56.2 153 30.7
MSTRG.9665 Avicennia marina HOM05D007129 ORTHO05D008680 6.7e-06 55.8 47 57.4
Sc12g0005690 Simmondsia chinensis HOM05D007129 ORTHO05D008680 6.7e-06 55.8 100 38.0
Solyc03g113880.4 Solanum lycopersicum HOM05D007129 ORTHO05D008680 6.7e-06 55.8 153 30.7
Ah.11g046160 Amaranthus hybridus HOM05D000306 ORTHO05D003182 8.7e-06 55.5 100 39.0


User provided reference genes

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