Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0018571 Sechium edule HOM05D006124 ORTHO05D007854 4.5e-247 857.4 425 100.0
ClCG01G004970 Citrullus lanatus HOM05D006124 ORTHO05D007854 6.5e-230 800.4 424 91.5
CsaV3_5G005370 Cucumis sativus L. HOM05D006124 ORTHO05D007854 1.2e-228 796.2 424 90.3
MELO3C005421.2 Cucumis melo HOM05D006124 ORTHO05D007854 3.6e-228 794.7 424 90.6
QL01p023235 Quercus lobata HOM05D006124 ORTHO05D007854 3.2e-208 728.4 423 81.1
Cfa012640 Carpinus fangiana HOM05D006124 ORTHO05D007854 3.5e-207 724.9 423 81.3
Haze_08019 Corylus avellana HOM05D006124 ORTHO05D007854 2.5e-205 718.8 430 80.0
FAN25G1144 Fragaria x ananassa HOM05D006124 ORTHO05D007854 1.6e-199 699.5 424 78.8
CANSAT54G1697 Cannabis sativa HOM05D006124 ORTHO05D007854 2.7e-199 698.7 423 79.0
RcHm_v2.0_Chr5g0060301 Rosa chinensis HOM05D006124 ORTHO05D007854 2.7e-199 698.7 424 78.8
Prupe.6G097100 Prunus persica HOM05D006124 ORTHO05D007854 6.0e-199 697.6 424 79.5
MD03G1112800 Malus domestica HOM05D006124 ORTHO05D007854 1.0e-198 696.8 419 80.0
FvH4_3g32970 Fragaria vesca HOM05D006124 ORTHO05D007854 1.3e-198 696.4 424 78.5
FAN11G0357 Fragaria x ananassa HOM05D006124 ORTHO05D007854 2.3e-198 695.7 424 78.5
Cpa.g.sc139.77 Carica papaya HOM05D006124 ORTHO05D007854 3.0e-198 695.3 422 80.1
GSVIVG01025154001 Vitis vinifera HOM05D006124 ORTHO05D007854 3.0e-198 695.3 419 81.1
Dinv30520 Davidia involucrata HOM05D006124 ORTHO05D007854 1.5e-197 693.0 421 80.3
FAN21G3497 Fragaria x ananassa HOM05D006124 ORTHO05D007854 1.5e-197 693.0 424 78.3
Hma1.2p1_0002F.1_g001970 Hydrangea macrophylla HOM05D006124 ORTHO05D007854 5.6e-197 691.0 418 80.1
Eucgr.J00945 Eucalyptus grandis HOM05D006124 ORTHO05D007854 1.2e-196 689.9 423 77.1
Rhsim08G0043400 Rhododendron simsii HOM05D006124 ORTHO05D007854 1.2e-196 689.9 424 79.2
vmacro03179 Vaccinium macrocarpon HOM05D006124 ORTHO05D007854 6.2e-196 687.6 424 78.8
CSS0017090 Camellia sinensis var. sinensis HOM05D006124 ORTHO05D007854 4.0e-195 684.9 424 79.2
Thecc.09G259100 Theobroma cacao HOM05D006124 ORTHO05D007854 8.9e-195 683.7 392 80.4
Nn7g36111 Nelumbo nucifera HOM05D006124 ORTHO05D007854 2.0e-194 682.6 415 79.8
Lj1g0025688 Lotus japonicus HOM05D006124 ORTHO05D007854 3.4e-194 681.8 423 75.7
Ciclev10011800m.g Citrus clementina HOM05D006124 ORTHO05D007854 4.4e-194 681.4 425 77.6
Duzib150G0641 Durio zibethinus HOM05D006124 ORTHO05D007854 4.4e-194 681.4 391 80.3
Ciclev10005033m.g Citrus clementina HOM05D006124 ORTHO05D007854 5.8e-194 681.0 424 76.2
Actinidia07118 Actinidia chinensis HOM05D006124 ORTHO05D007854 9.9e-194 680.2 425 78.6
Glyma.19G129000 Glycine max HOM05D006124 ORTHO05D007854 1.3e-193 679.9 423 74.5
Nitab4.5_0000214g0090 Nicotiana tabacum HOM05D006124 ORTHO05D007854 3.8e-193 678.3 418 77.5
COL.COLO4_05187 Corchorus olitorius HOM05D006124 ORTHO05D007854 6.4e-193 677.6 419 78.3
Atru.chr3.3681 Acer truncatum HOM05D006124 ORTHO05D007854 1.1e-192 676.8 425 75.8
CiPaw.05G171100 Carya illinoinensis HOM05D006124 ORTHO05D007854 3.2e-192 675.2 425 77.9
Lalb_Chr22g0357551 Lupinus albus HOM05D006124 ORTHO05D007854 3.2e-192 675.2 423 74.0
Manes.04G024500 Manihot esculenta HOM05D006124 ORTHO05D007854 1.2e-191 673.3 416 77.4
Ca_08379_v3 Cicer arietinum L. HOM05D006124 ORTHO05D007854 1.6e-191 672.9 422 75.1
Aqoxy5G00340 Aquilegia oxysepala HOM05D006124 ORTHO05D007854 2.1e-191 672.5 422 76.3
Cc01_g01430 Coffea canephora HOM05D006124 ORTHO05D007854 4.6e-191 671.4 421 77.9
Medtr7g089440 Medicago truncatula HOM05D006124 ORTHO05D007854 1.7e-190 669.5 424 73.8
PSO541G0641 Papaver somniferum HOM05D006124 ORTHO05D007854 3.0e-190 668.7 419 76.4
PSO384G4530 Papaver somniferum HOM05D006124 ORTHO05D007854 5.1e-190 667.9 392 78.6
TPR.G16093 Trifolium pratense HOM05D006124 ORTHO05D007854 6.6e-190 667.5 423 74.2
Solyc04g054700.3 Solanum lycopersicum HOM05D006124 ORTHO05D007854 1.5e-189 666.4 418 76.1
VMungo1383G3228 Vigna mungo HOM05D006124 ORTHO05D007854 1.9e-189 666.0 425 73.4
Glyma.11G073900 Glycine max HOM05D006124 ORTHO05D007854 2.5e-189 665.6 423 73.3
THA.LOC104801004 Tarenaya hassleriana HOM05D006124 ORTHO05D007854 2.5e-189 665.6 417 77.5
MBI18_g17017_MAGBIO Magnolia biondii HOM05D006124 ORTHO05D007854 3.3e-189 665.2 395 78.2
PSO339G3674 Papaver somniferum HOM05D006124 ORTHO05D007854 3.3e-189 665.2 392 78.3
Gohir.D09G102900 Gossypium hirsutum HOM05D006124 ORTHO05D007854 4.3e-189 664.8 416 75.2
arahy.Tifrunner.gnm1.ann1.63AZS3 Arachis hypogaea HOM05D006124 ORTHO05D007854 5.6e-189 664.5 422 74.2
Gohir.A09G106200 Gossypium hirsutum HOM05D006124 ORTHO05D007854 5.6e-189 664.5 416 76.4
Gorai.006G120700 Gossypium raimondii HOM05D006124 ORTHO05D007854 5.6e-189 664.5 416 76.4
Peaxi162Scf00876g00022 Petunia axillaris HOM05D006124 ORTHO05D007854 7.3e-189 664.1 395 79.5
arahy.Tifrunner.gnm1.ann1.M1WJK6 Arachis hypogaea HOM05D006124 ORTHO05D007854 1.6e-188 662.9 422 74.2
CAN.G219.5 Capsicum annuum HOM05D006124 ORTHO05D007854 1.6e-188 662.9 418 78.0
Nitab4.5_0004386g0010 Nicotiana tabacum HOM05D006124 ORTHO05D007854 1.4e-187 659.8 412 77.2
Thhalv10007730m.g Eutrema salsugineum HOM05D006124 ORTHO05D007854 3.1e-187 658.7 421 74.8
Lalb_Chr14g0365721 Lupinus albus HOM05D006124 ORTHO05D007854 3.1e-187 658.7 423 73.3
Peaxi162Scf00272g00827 Petunia axillaris HOM05D006124 ORTHO05D007854 9.0e-187 657.1 420 76.9
Lsat_1_v5_gn_6_46340 Lactuca sativa HOM05D006124 ORTHO05D007854 3.4e-186 655.2 392 77.8
TWI39G0794 Tripterygium wilfordii HOM05D006124 ORTHO05D007854 3.4e-186 655.2 416 75.2
Migut.D02195 Erythranthe guttata HOM05D006124 ORTHO05D007854 1.7e-185 652.9 395 77.2
Aa31LG1G19730 Aethionema arabicum HOM05D006124 ORTHO05D007854 2.2e-185 652.5 420 74.3
HanXRQChr02g0055911 Helianthus annuus HOM05D006124 ORTHO05D007854 1.1e-184 650.2 419 75.2
CARHR004500 Cardamine hirsuta HOM05D006124 ORTHO05D007854 1.4e-184 649.8 421 74.1
Sp1g03920 Schrenkiella parvula HOM05D006124 ORTHO05D007854 1.4e-184 649.8 423 74.2
EL10Ac5g12347 Beta vulgaris HOM05D006124 ORTHO05D007854 1.9e-184 649.4 393 77.1
A08p36590 Brassica napus HOM05D006124 ORTHO05D007854 3.2e-184 648.7 421 73.6
BraA08t35561Z Brassica rapa HOM05D006124 ORTHO05D007854 3.2e-184 648.7 421 73.6
AL1G14800 Arabidopsis lyrata HOM05D006124 ORTHO05D007854 7.1e-184 647.5 421 74.8
C08p01730 Brassica napus HOM05D006124 ORTHO05D007854 1.6e-183 646.4 421 73.4
BolC8t46973H Brassica oleracea HOM05D006124 ORTHO05D007854 1.6e-183 646.4 421 73.4
BcaB03g13459 Brassica carinata HOM05D006124 ORTHO05D007854 2.1e-183 646.0 421 73.4
AT1G05055 Arabidopsis thaliana HOM05D006124 ORTHO05D007854 2.7e-183 645.6 421 74.1
MSTRG.21138 Avicennia marina HOM05D006124 ORTHO05D007854 7.8e-183 644.0 395 77.0
Carub.0001s0430 Capsella rubella HOM05D006124 ORTHO05D007854 1.7e-182 642.9 421 73.2
Potri.004G113700 Populus trichocarpa HOM05D006124 ORTHO05D007854 4.3e-181 638.3 386 76.7
Sabra04G0071700 Salix brachista HOM05D006124 ORTHO05D007854 4.3e-181 638.3 386 77.2
ECA233G1948 Erigeron canadensis HOM05D006124 ORTHO05D007854 2.4e-179 632.5 386 77.2
SGA_v2.0_scaffold61G21160 Striga asiatica HOM05D006124 ORTHO05D007854 1.3e-177 626.7 417 71.9
CiPaw.13G108300 Carya illinoinensis HOM05D006124 ORTHO05D007854 5.4e-176 621.3 376 80.3
Os04g0508900 Oryza sativa ssp. japonica HOM05D006124 ORTHO05D007854 2.8e-172 609.0 389 73.3
Zm00001eb077790 Zea mays HOM05D006124 ORTHO05D007854 4.8e-172 608.2 389 73.5
unitig_21.g20322 Utricularia gibba HOM05D006124 ORTHO05D007854 5.3e-171 604.7 432 68.3
PGR119G0371 Punica granatum HOM05D006124 ORTHO05D007854 1.5e-170 603.2 373 78.3
DCAR_015555 Daucus carota HOM05D006124 ORTHO05D007854 6.0e-167 591.3 365 77.5
Oeu035057.1 Olea europaea HOM05D006124 ORTHO05D007854 7.9e-167 590.9 374 77.3
AUR62021039 Chenopodium quinoa HOM05D006124 ORTHO05D007854 3.9e-166 588.6 359 76.6
AUR62018404 Chenopodium quinoa HOM05D006124 ORTHO05D007854 1.4e-163 580.1 348 77.9
SEGI_32950 Sequoiadendron giganteum HOM05D006124 ORTHO05D007854 3.1e-163 578.9 388 68.3
SalBow3G1513 Salvia bowleyana HOM05D006124 ORTHO05D007854 4.0e-163 578.6 351 78.3
CDE04G2680 Ceratophyllum demersum HOM05D006124 ORTHO05D007854 1.2e-154 550.4 339 76.7
Mapoly0005s0033 Marchantia polymorpha HOM05D006124 ORTHO05D007854 2.0e-154 549.7 386 63.2
TAR369G0666 Trochodendron aralioides HOM05D006124 ORTHO05D007854 4.5e-154 548.5 333 76.9
Sopen04g024450 Solanum pennellii HOM05D006124 ORTHO05D007854 1.7e-153 546.6 320 78.4
Pp3c24_6530 Physcomitrium patens HOM05D006124 ORTHO05D007854 5.0e-153 545.0 388 63.1
Ah.13g077240 Amaranthus hybridus HOM05D006124 ORTHO05D007854 6.5e-153 544.7 323 78.0
Sc06g0010480 Simmondsia chinensis HOM05D006124 ORTHO05D007854 2.7e-151 539.3 325 76.0
Phvul.001G121400 Phaseolus vulgaris HOM05D006124 ORTHO05D007854 2.8e-148 529.3 316 75.3
MD11G1132000 Malus domestica HOM05D006124 ORTHO05D007854 1.1e-147 527.3 340 71.5
ATR0580G285 Amborella trichopoda HOM05D006124 ORTHO05D007854 1.0e-145 520.8 327 73.1
Peaxi162Scf00106g02220 Petunia axillaris HOM05D006124 ORTHO05D007854 1.9e-144 516.5 411 66.4
CBR_g21234 Chara braunii HOM05D006124 ORTHO05D007854 4.2e-144 515.4 391 60.4
SMO141G0040 Selaginella moellendorffii HOM05D006124 ORTHO05D007854 6.1e-143 511.5 388 59.8
Lj1C682G4 Lonicera japonica HOM05D006124 ORTHO05D007854 7.7e-138 494.6 291 79.0
Peaxi162Scf00876g00023 Petunia axillaris HOM05D006124 ORTHO05D007854 2.5e-128 463.0 292 75.3
Psat3g079640 Pisum sativum HOM05D006124 ORTHO05D007854 2.0e-125 453.4 266 77.4
Cre03.g179550 Chlamydomonas reinhardtii HOM05D006124 ORTHO05D007854 1.7e-108 397.1 402 47.8
AagrBONN_evm.TU.Sc2ySwM_344.4431 Anthoceros agrestis HOM05D006124 ORTHO05D007854 1.5e-104 384.0 274 62.0
PGSC0003DMG401027913 Solanum tuberosum HOM05D006124 ORTHO05D007854 4.4e-101 372.5 248 74.6
CAN.G1136.1 Capsicum annuum HOM05D006124 ORTHO05D007854 2.4e-99 366.7 247 69.2
MCO11G183 Micromonas commoda HOM05D006124 ORTHO05D007854 6.2e-95 352.1 415 42.4
BolC5t29103H Brassica oleracea HOM05D006124 ORTHO05D007854 1.5e-93 347.4 315 57.1
Solyc08g028693.1 Solanum lycopersicum HOM05D006124 ORTHO05D007854 1.3e-84 317.8 200 74.0
Haze_26481 Corylus avellana HOM05D006124 ORTHO05D007854 5.6e-80 302.4 393 39.7
Cfa026643 Carpinus fangiana HOM05D006124 ORTHO05D007854 3.3e-72 276.6 440 35.9
PRCOL_00001395 Prasinoderma coloniale HOM05D006124 ORTHO05D007854 6.6e-65 252.3 354 38.1
Lj1A187G25 Lonicera japonica HOM05D006124 ORTHO05D007854 1.4e-59 234.6 322 42.2
HPP92_015146 Vanilla planifolia HOM05D006124 ORTHO05D007854 5.1e-33 146.4 98 66.3
Peaxi162Scf00876g00016 Petunia axillaris HOM05D006124 ORTHO05D007854 5.7e-24 116.3 71 81.7
BcaC09g51580 Brassica carinata HOM05D006124 ORTHO05D007854 9.7e-24 115.5 94 64.9
Psat6g235520 Pisum sativum HOM05D006124 ORTHO05D001516 1.8e-22 111.3 74 67.6
ClCG03G002310 Citrullus lanatus HOM05D006124 ORTHO05D150439 7.7e-21 105.9 134 43.3
Lj1A682T15 Lonicera japonica HOM05D006124 ORTHO05D007854 2.3e-17 94.4 46 82.6
ECA247G2464 Erigeron canadensis HOM05D011992 ORTHO05D008321 2.6e-13 80.9 88 50.0
RcHm_v2.0_Chr5g0060231 Rosa chinensis HOM05D006124 ORTHO05D007854 5.0e-12 76.6 61 59.0
HPP92_015147 Vanilla planifolia HOM05D006124 ORTHO05D007854 2.5e-11 74.3 55 69.1


User provided reference genes

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