Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0017322 Sechium edule HOM05D006635 ORTHO05D008047 7.3e-127 457.2 229 100.0
MELO3C018624.2 Cucumis melo HOM05D006635 ORTHO05D008047 3.4e-108 395.2 241 85.1
ClCG09G015590 Citrullus lanatus HOM05D006635 ORTHO05D008047 7.6e-108 394.0 248 82.3
CsaV3_7G006710 Cucumis sativus L. HOM05D006635 ORTHO05D008047 6.4e-107 391.0 235 85.1
Haze_11307 Corylus avellana HOM05D006635 ORTHO05D008047 8.8e-88 327.4 228 71.5
Haze_11310 Corylus avellana HOM05D006635 ORTHO05D008047 9.7e-87 323.9 228 70.6
Cfa008372 Carpinus fangiana HOM05D003636 ORTHO05D005160 8.2e-86 320.9 228 70.2
Actinidia08441 Actinidia chinensis HOM05D006635 ORTHO05D008047 1.8e-85 319.7 230 70.4
CSS0008878 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 1.8e-85 319.7 236 69.9
GSVIVG01018125001 Vitis vinifera HOM05D006635 ORTHO05D008047 3.1e-85 318.9 223 72.2
CANSAT78G1035 Cannabis sativa HOM05D006635 ORTHO05D008047 6.9e-85 317.8 229 70.7
Prupe.1G031500 Prunus persica HOM05D006635 ORTHO05D008047 7.7e-84 314.3 227 69.6
CiPaw.01G189900 Carya illinoinensis HOM05D006635 ORTHO05D008047 1.0e-83 313.9 228 71.1
Migut.G00439 Erythranthe guttata HOM05D006635 ORTHO05D008047 2.2e-83 312.8 232 66.8
Dinv29905 Davidia involucrata HOM05D006635 ORTHO05D008047 2.9e-83 312.4 215 71.2
RcHm_v2.0_Chr1g0323991 Rosa chinensis HOM05D006635 ORTHO05D008047 8.5e-83 310.8 226 69.0
Hma1.2p1_0650F.1_g195460 Hydrangea macrophylla HOM05D006635 ORTHO05D008047 1.1e-82 310.5 227 68.3
PGSC0003DMG400016282 Solanum tuberosum HOM05D006635 ORTHO05D008047 1.1e-82 310.5 224 67.4
DCAR_027282 Daucus carota HOM05D006635 ORTHO05D008047 1.4e-82 310.1 228 66.2
MSTRG.4101 Avicennia marina HOM05D006635 ORTHO05D008047 2.5e-82 309.3 214 70.1
Eucgr.H03153 Eucalyptus grandis HOM05D006635 ORTHO05D008047 3.2e-82 308.9 235 68.1
Sopen06g018890 Solanum pennellii HOM05D006635 ORTHO05D008047 4.2e-82 308.5 224 67.4
THA.LOC104808600 Tarenaya hassleriana HOM05D006635 ORTHO05D008047 9.4e-82 307.4 227 67.0
TWI53G1330 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 1.2e-81 307.0 225 68.0
TWI53G1448 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 1.2e-81 307.0 225 68.0
MD13G1208000 Malus domestica HOM05D006635 ORTHO05D008047 3.6e-81 305.4 226 68.6
Solyc06g053770.4 Solanum lycopersicum HOM05D006635 ORTHO05D008047 3.6e-81 305.4 223 66.8
FvH4_2g07190 Fragaria vesca HOM05D006635 ORTHO05D008047 4.7e-81 305.1 226 67.3
Ciclev10005690m.g Citrus clementina HOM05D006635 ORTHO05D008047 6.1e-81 304.7 229 67.2
FAN24G3344 Fragaria x ananassa HOM05D006635 ORTHO05D008047 6.1e-81 304.7 226 67.3
Ciclev10005689m.g Citrus clementina HOM05D006635 ORTHO05D008047 7.9e-81 304.3 225 68.0
Cpa.g.sc58.53 Carica papaya HOM05D006635 ORTHO05D008047 1.8e-80 303.1 222 68.0
Atru.chr4.2211 Acer truncatum HOM05D006635 ORTHO05D008047 2.3e-80 302.8 225 65.8
Aqoxy5G00314 Aquilegia oxysepala HOM05D006635 ORTHO05D008047 2.3e-80 302.8 234 63.7
Thecc.04G246700 Theobroma cacao HOM05D006635 ORTHO05D008047 3.9e-80 302.0 222 68.0
FAN20G2319 Fragaria x ananassa HOM05D006635 ORTHO05D008047 6.7e-80 301.2 226 65.9
Manes.15G037200 Manihot esculenta HOM05D006635 ORTHO05D008047 6.7e-80 301.2 228 67.1
Potri.010G075900 Populus trichocarpa HOM05D006635 ORTHO05D008047 1.5e-79 300.1 224 68.3
Cc03_g04920 Coffea canephora HOM05D006635 ORTHO05D008047 3.3e-79 298.9 237 64.1
CAN.G118.6 Capsicum annuum HOM05D006635 ORTHO05D008047 7.4e-79 297.7 225 66.2
Lj5g0017333 Lotus japonicus HOM05D006635 ORTHO05D008047 2.2e-78 296.2 225 66.2
Nitab4.5_0000302g0050 Nicotiana tabacum HOM05D006635 ORTHO05D008047 2.2e-78 296.2 228 64.9
Ca_09839_v3 Cicer arietinum L. HOM05D006635 ORTHO05D008047 1.1e-77 293.9 224 65.6
COL.COLO4_15799 Corchorus olitorius HOM05D006635 ORTHO05D008047 1.1e-77 293.9 224 64.3
Sc19g0003750 Simmondsia chinensis HOM05D006635 ORTHO05D008047 1.4e-77 293.5 228 64.0
Gohir.D10G153800 Gossypium hirsutum HOM05D006635 ORTHO05D008047 2.4e-77 292.7 224 64.3
Gorai.011G171700 Gossypium raimondii HOM05D006635 ORTHO05D008047 2.4e-77 292.7 224 64.3
arahy.Tifrunner.gnm1.ann1.20YP49 Arachis hypogaea HOM05D006635 ORTHO05D008047 3.1e-77 292.4 223 65.0
Psat4g107880 Pisum sativum HOM05D006635 ORTHO05D008047 3.1e-77 292.4 225 65.8
AUR62002251 Chenopodium quinoa HOM05D006635 ORTHO05D008047 5.3e-77 291.6 231 64.5
Lalb_Chr02g0150381 Lupinus albus HOM05D006635 ORTHO05D008047 5.3e-77 291.6 230 64.3
Sc19g0005210 Simmondsia chinensis HOM05D006635 ORTHO05D008047 5.3e-77 291.6 228 63.6
arahy.Tifrunner.gnm1.ann1.P8HXAC Arachis hypogaea HOM05D006635 ORTHO05D008047 7.0e-77 291.2 223 64.6
Nn1g02620 Nelumbo nucifera HOM05D006635 ORTHO05D008047 7.0e-77 291.2 262 58.8
PGR004G0241 Punica granatum HOM05D006635 ORTHO05D008047 7.0e-77 291.2 232 62.5
Lj6A657T45 Lonicera japonica HOM05D006635 ORTHO05D008047 9.1e-77 290.8 216 65.7
Gohir.A10G113600 Gossypium hirsutum HOM05D006635 ORTHO05D008047 1.2e-76 290.4 224 63.8
Ciclev10007171m.g Citrus clementina HOM05D006635 ORTHO05D008047 1.5e-76 290.0 209 68.9
PSO832G2723 Papaver somniferum HOM05D006635 ORTHO05D008047 5.9e-76 288.1 227 63.4
Medtr1g075330 Medicago truncatula HOM05D006635 ORTHO05D008047 1.0e-75 287.3 224 64.7
Oeu058885.1 Olea europaea HOM05D006635 ORTHO05D008047 2.2e-75 286.2 250 58.8
PSO210G4915 Papaver somniferum HOM05D006635 ORTHO05D008047 2.2e-75 286.2 227 62.6
ECA240G1129 Erigeron canadensis HOM05D000856 ORTHO05D002253 1.1e-74 283.9 223 63.2
HanXRQChr13g0424511 Helianthus annuus HOM05D006635 ORTHO05D008047 2.5e-74 282.7 227 63.0
AL3G37550 Arabidopsis lyrata HOM05D006635 ORTHO05D008047 3.2e-74 282.3 224 62.5
Carub.0003s2327 Capsella rubella HOM05D006635 ORTHO05D008047 3.2e-74 282.3 225 62.7
AT3G23100 Arabidopsis thaliana HOM05D006635 ORTHO05D008047 7.2e-74 281.2 224 62.1
FAN27G3431 Fragaria x ananassa HOM05D006635 ORTHO05D008047 1.2e-73 280.4 252 59.1
vmacro15410 Vaccinium macrocarpon HOM05D006635 ORTHO05D008047 1.6e-73 280.0 282 55.3
Nitab4.5_0008721g0010 Nicotiana tabacum HOM05D006635 ORTHO05D008047 6.1e-73 278.1 197 68.0
CARHR099010 Cardamine hirsuta HOM05D006635 ORTHO05D008047 8.0e-73 277.7 225 62.7
Sp3g20780 Schrenkiella parvula HOM05D006635 ORTHO05D008047 1.8e-72 276.6 230 60.9
HPP92_023529 Vanilla planifolia HOM05D006635 ORTHO05D008047 5.2e-72 275.0 231 61.0
QL06p015844 Quercus lobata HOM05D006635 ORTHO05D008047 5.7e-71 271.6 320 48.8
Ah.13g066120 Amaranthus hybridus HOM05D006635 ORTHO05D008047 7.4e-71 271.2 225 60.0
BcaB04g20471 Brassica carinata HOM05D006635 ORTHO05D008047 1.4e-69 266.9 191 64.9
ATR0824G049 Amborella trichopoda HOM05D006635 ORTHO05D008047 2.4e-69 266.2 229 57.6
A01p31980 Brassica napus HOM05D006635 ORTHO05D008047 5.3e-69 265.0 192 64.1
BraA01t03324Z Brassica rapa HOM05D006635 ORTHO05D008047 5.3e-69 265.0 192 64.1
BcaC09g49245 Brassica carinata HOM05D006635 ORTHO05D008047 7.0e-69 264.6 226 59.3
CSS0031458 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 2.2e-67 259.6 262 56.9
Os03g0740800 Oryza sativa ssp. japonica HOM05D006635 ORTHO05D008047 2.2e-67 259.6 233 56.7
Glyma.10G184800 Glycine max HOM05D006635 ORTHO05D008047 6.5e-67 258.1 224 56.7
Peaxi162Scf00325g00713 Petunia axillaris HOM05D006635 ORTHO05D008047 8.5e-67 257.7 230 59.6
Duzib151G0047 Durio zibethinus HOM05D006635 ORTHO05D008047 1.9e-66 256.5 225 60.0
CDE04G0173 Ceratophyllum demersum HOM05D006635 ORTHO05D008047 3.2e-66 255.8 226 59.7
Glyma.20G205600 Glycine max HOM05D006635 ORTHO05D008047 3.6e-65 252.3 224 55.4
Hund11856 Selenicereus undatus HOM05D006635 ORTHO05D008047 8.0e-65 251.1 221 58.8
Phvul.007G125600 Phaseolus vulgaris HOM05D006635 ORTHO05D008047 3.0e-64 249.2 229 55.9
Zm00001eb056730 Zea mays HOM05D006635 ORTHO05D008047 5.2e-64 248.4 241 53.1
BolC1t04048H Brassica oleracea HOM05D006635 ORTHO05D008047 8.8e-64 247.7 172 65.1
Aa31LG8G9580 Aethionema arabicum HOM05D006635 ORTHO05D008047 2.0e-63 246.5 221 55.7
EL10Ac3g05891 Beta vulgaris HOM05D006635 ORTHO05D008047 5.7e-63 245.0 234 55.6
VMungo0720G1578 Vigna mungo HOM05D006635 ORTHO05D008047 3.5e-60 235.7 229 54.1
Thhalv10022194m.g Eutrema salsugineum HOM05D006635 ORTHO05D008047 5.0e-59 231.9 224 52.2
MBI19_g38372_MAGBIO Magnolia biondii HOM05D006635 ORTHO05D008047 1.4e-56 223.8 229 54.6
Lsat_1_v5_gn_3_122920 Lactuca sativa HOM05D006635 ORTHO05D008047 8.8e-56 221.1 189 61.4
Sabra10G0032800 Salix brachista HOM05D006635 ORTHO05D008047 1.4e-53 213.8 417 36.0
C01p40990 Brassica napus HOM05D006635 ORTHO05D008047 5.2e-48 195.3 131 65.6
PGR004G0922 Punica granatum HOM05D006635 ORTHO05D008047 3.2e-45 186.0 159 59.1
PGR102G1543 Punica granatum HOM05D006635 ORTHO05D008047 2.3e-43 179.9 232 44.8
Mapoly0014s0074 Marchantia polymorpha HOM05D006635 ORTHO05D008047 7.3e-42 174.9 227 43.2
AUR62015462 Chenopodium quinoa HOM05D006635 ORTHO05D008047 4.6e-36 155.6 152 57.9
PGR083G1020 Punica granatum HOM05D006635 ORTHO05D008047 2.4e-29 133.3 232 38.4
AagrBONN_evm.TU.Sc2ySwM_228.5661 Anthoceros agrestis HOM05D006635 ORTHO05D008047 4.1e-29 132.5 220 33.6
Ciclev10029925m.g Citrus clementina HOM05D006635 ORTHO05D008047 9.2e-29 131.3 132 53.0
TPR.G27195 Trifolium pratense HOM05D006635 ORTHO05D008047 9.2e-29 131.3 89 65.2
TAR636G2119 Trochodendron aralioides HOM05D006635 ORTHO05D008047 1.9e-26 123.6 98 57.1
TAR636G0517 Trochodendron aralioides HOM05D006635 ORTHO05D008047 3.4e-23 112.8 93 68.8
Pp3c14_21160 Physcomitrium patens HOM05D006635 ORTHO05D008047 7.6e-23 111.7 226 34.5
SEGI_11171 Sequoiadendron giganteum HOM05D006635 ORTHO05D008047 4.6e-20 102.4 88 54.5
Pp3c1_38430 Physcomitrium patens HOM05D006635 ORTHO05D008047 8.6e-19 98.2 235 29.8
AT1G61410 Arabidopsis thaliana HOM05D006635 ORTHO05D008047 1.5e-18 97.4 102 57.8
Oeu058884.1 Olea europaea HOM05D001680 ORTHO05D001596 4.3e-18 95.9 93 57.0
MBI19_g44428_MAGBIO Magnolia biondii HOM05D006635 ORTHO05D008047 4.7e-17 92.4 131 43.5
SEGI_02340 Sequoiadendron giganteum HOM05D006635 ORTHO05D008047 2.4e-16 90.1 88 53.4
CBR_g33918 Chara braunii HOM05D006635 ORTHO05D008047 4.0e-16 89.4 173 34.1
C01p40960 Brassica napus HOM05D006635 ORTHO05D008047 1.3e-14 84.3 86 53.5
Thhalv10021924m.g Eutrema salsugineum HOM05D006635 ORTHO05D008047 7.1e-13 78.6 87 51.7
Pp3c10_9830 Physcomitrium patens HOM05D000160 ORTHO05D000496 6.6e-11 72.0 162 34.0
C01p40970 Brassica napus HOM05D006635 ORTHO05D008047 7.3e-10 68.6 49 57.1
Pp3c13_7410 Physcomitrium patens HOM05D000160 ORTHO05D000496 9.6e-10 68.2 166 28.9
unitig_747.g21677 Utricularia gibba HOM05D006635 ORTHO05D008047 5.8e-07 58.9 50 52.0


User provided reference genes

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