Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0017085 Sechium edule HOM05D003635 ORTHO05D004283 1.9e-68 262.3 126 100.0
ClCG02G013500 Citrullus lanatus HOM05D003635 ORTHO05D004283 9.9e-33 143.7 154 53.2
MELO3C023823.2 Cucumis melo HOM05D003635 ORTHO05D004283 9.9e-33 143.7 154 53.2
CsaV3_5G006650 Cucumis sativus L. HOM05D003635 ORTHO05D004283 9.9e-33 143.7 154 53.2
Ah.09g234270 Amaranthus hybridus HOM05D003635 ORTHO05D004283 3.7e-32 141.7 154 53.2
EL10Ac2g03470 Beta vulgaris HOM05D003635 ORTHO05D004283 3.7e-32 141.7 154 53.2
AUR62035965 Chenopodium quinoa HOM05D003635 ORTHO05D004283 3.7e-32 141.7 154 53.2
Hund19994 Selenicereus undatus HOM05D003635 ORTHO05D004283 3.7e-32 141.7 154 53.2
AUR62022537 Chenopodium quinoa HOM05D003635 ORTHO05D004283 4.9e-32 141.4 154 53.2
Sc06g0001910 Simmondsia chinensis HOM05D003635 ORTHO05D004283 4.9e-32 141.4 154 52.6
Haze_16985 Corylus avellana HOM05D003635 ORTHO05D004283 6.4e-32 141.0 154 52.6
CDE09G0269 Ceratophyllum demersum HOM05D003635 ORTHO05D004283 8.4e-32 140.6 154 51.9
Sed0026990 Sechium edule HOM05D003635 ORTHO05D004283 8.4e-32 140.6 154 52.6
Aa31LG10G9870 Aethionema arabicum HOM05D003635 ORTHO05D004283 1.1e-31 140.2 154 52.6
Carub.0005s2188 Capsella rubella HOM05D003635 ORTHO05D004283 1.1e-31 140.2 154 52.6
Ciclev10030532m.g Citrus clementina HOM05D003635 ORTHO05D004283 1.1e-31 140.2 153 52.9
Sp5g07240 Schrenkiella parvula HOM05D003635 ORTHO05D004283 1.1e-31 140.2 154 52.6
THA.LOC104810010 Tarenaya hassleriana HOM05D003635 ORTHO05D004283 1.1e-31 140.2 154 51.9
THA.LOC104824257 Tarenaya hassleriana HOM05D003635 ORTHO05D004283 1.1e-31 140.2 154 51.9
Cpa.g.sc1.324 Carica papaya HOM05D003635 ORTHO05D004283 1.4e-31 139.8 154 52.6
CiPaw.01G281100 Carya illinoinensis HOM05D003635 ORTHO05D004283 1.4e-31 139.8 154 51.9
CiPaw.02G179700 Carya illinoinensis HOM05D003635 ORTHO05D004283 1.4e-31 139.8 154 51.9
Eucgr.J01165 Eucalyptus grandis HOM05D003635 ORTHO05D004283 1.4e-31 139.8 154 52.6
Thhalv10006588m.g Eutrema salsugineum HOM05D003635 ORTHO05D004283 1.4e-31 139.8 154 51.9
Cfa001548 Carpinus fangiana HOM05D003635 ORTHO05D004283 1.9e-31 139.4 154 51.3
Atru.chr12.571 Acer truncatum HOM05D003635 ORTHO05D004283 2.4e-31 139.0 152 53.9
AT3G55200 Arabidopsis thaliana HOM05D003635 ORTHO05D004283 3.2e-31 138.7 154 51.9
AT3G55220 Arabidopsis thaliana HOM05D003635 ORTHO05D004283 3.2e-31 138.7 154 51.9
BcaB02g07694 Brassica carinata HOM05D003635 ORTHO05D004283 3.2e-31 138.7 154 51.3
BcaC09g48162 Brassica carinata HOM05D003635 ORTHO05D004283 3.2e-31 138.7 154 51.3
BolC1t05325H Brassica oleracea HOM05D003635 ORTHO05D004283 3.2e-31 138.7 154 51.3
BraA01t04192Z Brassica rapa HOM05D003635 ORTHO05D004283 3.2e-31 138.7 154 51.3
CSS0019699 Camellia sinensis var. sinensis HOM05D003635 ORTHO05D004283 3.2e-31 138.7 154 52.6
CANSAT56G1536 Cannabis sativa HOM05D003635 ORTHO05D004283 3.2e-31 138.7 154 51.9
CARHR289060 Cardamine hirsuta HOM05D003635 ORTHO05D004283 3.2e-31 138.7 154 51.9
Gohir.A05G351700 Gossypium hirsutum HOM05D003635 ORTHO05D004283 3.2e-31 138.7 154 52.6
Gorai.012G068000 Gossypium raimondii HOM05D003635 ORTHO05D004283 3.2e-31 138.7 154 52.6
Lj5g0001158 Lotus japonicus HOM05D003635 ORTHO05D004283 3.2e-31 138.7 154 51.9
Manes.07G109100 Manihot esculenta HOM05D003635 ORTHO05D004283 3.2e-31 138.7 154 51.9
SEGI_11055 Sequoiadendron giganteum HOM05D003635 ORTHO05D004283 3.2e-31 138.7 154 50.6
TAR369G0684 Trochodendron aralioides HOM05D003635 ORTHO05D004283 3.2e-31 138.7 154 52.6
Ca_11305_v3 Cicer arietinum L. HOM05D003635 ORTHO05D004283 4.1e-31 138.3 154 50.6
Glyma.20G240500 Glycine max HOM05D003635 ORTHO05D004283 4.1e-31 138.3 154 51.3
Gohir.A10G210700 Gossypium hirsutum HOM05D003635 ORTHO05D004283 4.1e-31 138.3 154 52.6
Gohir.D10G219000 Gossypium hirsutum HOM05D003635 ORTHO05D004283 4.1e-31 138.3 154 52.6
Gorai.011G245700 Gossypium raimondii HOM05D003635 ORTHO05D004283 4.1e-31 138.3 154 52.6
Hma1.2p1_3477F.1_g336300 Hydrangea macrophylla HOM05D003635 ORTHO05D004283 4.1e-31 138.3 154 51.9
Nn2g12856 Nelumbo nucifera HOM05D003635 ORTHO05D004283 4.1e-31 138.3 154 50.0
Psat6g237600 Pisum sativum HOM05D003635 ORTHO05D004283 4.1e-31 138.3 154 51.3
ATR0820G062 Amborella trichopoda HOM05D003635 ORTHO05D004283 5.4e-31 137.9 154 50.0
arahy.Tifrunner.gnm1.ann1.4JT818 Arachis hypogaea HOM05D003635 ORTHO05D004283 5.4e-31 137.9 154 51.3
arahy.Tifrunner.gnm1.ann1.T81D7J Arachis hypogaea HOM05D003635 ORTHO05D004283 5.4e-31 137.9 154 51.3
Glyma.10G291300 Glycine max HOM05D003635 ORTHO05D004283 7.1e-31 137.5 154 51.3
Manes.10G036500 Manihot esculenta HOM05D003635 ORTHO05D004283 7.1e-31 137.5 154 51.3
Phvul.007G009600 Phaseolus vulgaris HOM05D003635 ORTHO05D004283 7.1e-31 137.5 154 51.9
TWI63G0503 Tripterygium wilfordii HOM05D003635 ORTHO05D004283 7.1e-31 137.5 154 51.3
COL.COLO4_10911 Corchorus olitorius HOM05D003635 ORTHO05D004283 9.2e-31 137.1 154 51.9
DCAR_015231 Daucus carota HOM05D003635 ORTHO05D004283 9.2e-31 137.1 154 51.3
DCAR_019162 Daucus carota HOM05D003635 ORTHO05D004283 9.2e-31 137.1 154 51.3
PGR142G3382 Punica granatum HOM05D003635 ORTHO05D004283 9.2e-31 137.1 154 51.3
Sabra08G0035000 Salix brachista HOM05D003635 ORTHO05D004283 9.2e-31 137.1 154 51.3
Rhsim09G0157900 Rhododendron simsii HOM05D003635 ORTHO05D004283 1.6e-30 136.3 154 51.3
VMungo0720G0614 Vigna mungo HOM05D003635 ORTHO05D004283 1.6e-30 136.3 154 51.9
Dinv25952 Davidia involucrata HOM05D003635 ORTHO05D004283 2.1e-30 136.0 154 50.6
Potri.008G048900 Populus trichocarpa HOM05D003635 ORTHO05D004283 2.1e-30 136.0 154 51.3
Prupe.2G226500 Prunus persica HOM05D003635 ORTHO05D004283 2.1e-30 136.0 154 50.6
QL08p057820 Quercus lobata HOM05D003635 ORTHO05D004283 2.1e-30 136.0 154 51.3
Aqoxy2G04103 Aquilegia oxysepala HOM05D003635 ORTHO05D004283 2.7e-30 135.6 154 50.6
CDE02G2560 Ceratophyllum demersum HOM05D003635 ORTHO05D004283 2.7e-30 135.6 154 50.6
Cc00_g29200 Coffea canephora HOM05D003635 ORTHO05D004283 2.7e-30 135.6 154 50.6
Dinv31402 Davidia involucrata HOM05D003635 ORTHO05D004283 2.7e-30 135.6 154 51.3
Duzib114G0516 Durio zibethinus HOM05D003635 ORTHO05D004283 2.7e-30 135.6 154 51.3
MD01G1119800 Malus domestica HOM05D003635 ORTHO05D004283 2.7e-30 135.6 154 50.0
MD07G1189000 Malus domestica HOM05D003635 ORTHO05D004283 2.7e-30 135.6 154 50.0
Pp3c16_16800 Physcomitrium patens HOM05D003635 ORTHO05D004283 2.7e-30 135.6 154 50.0
Thecc.10G059000 Theobroma cacao HOM05D003635 ORTHO05D004283 2.7e-30 135.6 154 51.3
Lj8A91T61 Lonicera japonica HOM05D003635 ORTHO05D004283 4.6e-30 134.8 154 51.3
Lalb_Chr06g0164191 Lupinus albus HOM05D003635 ORTHO05D004283 4.6e-30 134.8 154 50.6
Medtr1g115525 Medicago truncatula HOM05D003635 ORTHO05D004283 4.6e-30 134.8 154 50.0
Pp3c12_11240 Physcomitrium patens HOM05D003635 ORTHO05D004283 4.6e-30 134.8 154 50.0
Lsat_1_v5_gn_8_18261 Lactuca sativa HOM05D003635 ORTHO05D004283 6.0e-30 134.4 154 51.3
Aqoxy1G01641 Aquilegia oxysepala HOM05D003635 ORTHO05D004283 7.8e-30 134.0 154 50.0
Potri.010G212100 Populus trichocarpa HOM05D003635 ORTHO05D004283 7.8e-30 134.0 154 50.6
unitig_736.g22269 Utricularia gibba HOM05D003635 ORTHO05D004283 7.8e-30 134.0 154 50.0
HanXRQChr14g0437201 Helianthus annuus HOM05D003635 ORTHO05D004283 1.0e-29 133.7 154 51.3
Solyc04g010260.3 Solanum lycopersicum HOM05D003635 ORTHO05D004283 1.0e-29 133.7 154 50.6
Sopen04g005450 Solanum pennellii HOM05D003635 ORTHO05D004283 1.0e-29 133.7 154 50.6
PGSC0003DMG400030187 Solanum tuberosum HOM05D003635 ORTHO05D004283 1.0e-29 133.7 154 50.6
MSTRG.22089 Avicennia marina HOM05D003635 ORTHO05D004283 1.7e-29 132.9 154 49.4
ECA233G0861 Erigeron canadensis HOM05D003635 ORTHO05D004283 1.7e-29 132.9 154 51.3
Nitab4.5_0000426g0110 Nicotiana tabacum HOM05D003635 ORTHO05D004283 1.7e-29 132.9 154 50.0
Nitab4.5_0012497g0010 Nicotiana tabacum HOM05D003635 ORTHO05D004283 1.7e-29 132.9 154 50.0
SalBow7G2745 Salvia bowleyana HOM05D003635 ORTHO05D004283 1.7e-29 132.9 154 50.6
Lalb_Chr02g0143971 Lupinus albus HOM05D003635 ORTHO05D004283 2.3e-29 132.5 154 50.6
Peaxi162Scf00060g00511 Petunia axillaris HOM05D003635 ORTHO05D004283 2.3e-29 132.5 154 50.0
CAN.G1557.8 Capsicum annuum HOM05D003635 ORTHO05D004283 3.0e-29 132.1 154 49.4
PSO339G2718 Papaver somniferum HOM05D003635 ORTHO05D004283 3.0e-29 132.1 154 48.7
Actinidia26801 Actinidia chinensis HOM05D003635 ORTHO05D004283 5.1e-29 131.3 151 51.0
AagrBONN_evm.TU.Sc2ySwM_368.1182 Anthoceros agrestis HOM05D003635 ORTHO05D004283 6.6e-29 131.0 154 49.4
Migut.N02978 Erythranthe guttata HOM05D003635 ORTHO05D004283 6.6e-29 131.0 154 49.4
Mapoly0009s0019 Marchantia polymorpha HOM05D003635 ORTHO05D004283 6.6e-29 131.0 154 48.7
Oeu016870.1 Olea europaea HOM05D003635 ORTHO05D004283 6.6e-29 131.0 154 49.4
Pp3c4_5190 Physcomitrium patens HOM05D003635 ORTHO05D004283 8.6e-29 130.6 154 48.7
PSO384G4083 Papaver somniferum HOM05D003635 ORTHO05D004283 1.1e-28 130.2 154 48.1
SGA_v2.0_scaffold54G19634 Striga asiatica HOM05D003635 ORTHO05D004283 1.1e-28 130.2 154 48.1
HPP92_016709 Vanilla planifolia HOM05D003635 ORTHO05D004283 1.1e-28 130.2 154 48.1
HPP92_027161 Vanilla planifolia HOM05D003635 ORTHO05D004283 1.1e-28 130.2 154 48.1
FvH4_1g28630 Fragaria vesca HOM05D003635 ORTHO05D004283 1.9e-28 129.4 154 48.1
FAN19G1456 Fragaria x ananassa HOM05D003635 ORTHO05D004283 1.9e-28 129.4 154 48.1
FAN23G1337 Fragaria x ananassa HOM05D003635 ORTHO05D004283 1.9e-28 129.4 154 48.1
FAN23G3063 Fragaria x ananassa HOM05D003635 ORTHO05D004283 1.9e-28 129.4 154 48.1
FAN26G2866 Fragaria x ananassa HOM05D003635 ORTHO05D004283 1.9e-28 129.4 154 48.1
FAN28G1684 Fragaria x ananassa HOM05D003635 ORTHO05D004283 1.9e-28 129.4 154 48.1
RcHm_v2.0_Chr3g0492631 Rosa chinensis HOM05D003635 ORTHO05D004283 1.9e-28 129.4 154 48.1
SMO116G0157 Selaginella moellendorffii HOM05D003635 ORTHO05D004283 9.6e-28 127.1 154 48.7
TPR.G14006 Trifolium pratense HOM05D003635 ORTHO05D004283 1.2e-27 126.7 124 55.6
AUR62023868 Chenopodium quinoa HOM05D003635 ORTHO05D004283 2.8e-27 125.6 152 47.4
SGA_v2.0_scaffold364G49990 Striga asiatica HOM05D003635 ORTHO05D004283 3.6e-27 125.2 154 46.1
Nn2g10520 Nelumbo nucifera HOM05D003635 ORTHO05D004283 4.7e-27 124.8 124 53.2
Sabra10G0164200 Salix brachista HOM05D003635 ORTHO05D004283 6.2e-27 124.4 128 53.9
Medtr4g115500 Medicago truncatula HOM05D003635 ORTHO05D004283 8.1e-27 124.0 153 47.1
Medtr4g115810 Medicago truncatula HOM05D003635 ORTHO05D004283 8.1e-27 124.0 153 47.1
Cre08.g372800 Chlamydomonas reinhardtii HOM05D003635 ORTHO05D004283 1.5e-25 119.8 160 45.0
MCO14G333 Micromonas commoda HOM05D003635 ORTHO05D004283 1.3e-24 116.7 154 45.5
AUR62002317 Chenopodium quinoa HOM05D003635 ORTHO05D004283 2.9e-24 115.5 127 51.2
RcHm_v2.0_Chr1g0365361 Rosa chinensis HOM05D003635 ORTHO05D004283 1.4e-23 113.2 154 44.8
Gohir.D04G061100 Gossypium hirsutum HOM05D003635 ORTHO05D004283 1.9e-23 112.8 117 54.7
Zm00001eb231820 Zea mays HOM05D003635 ORTHO05D004283 5.4e-23 111.3 162 43.2
HanXRQChr08g0228691 Helianthus annuus HOM05D003635 ORTHO05D004283 1.6e-22 109.8 117 53.8
PRCOL_00000086 Prasinoderma coloniale HOM05D003635 ORTHO05D004283 1.3e-21 106.7 154 40.9
CBR_g32401 Chara braunii HOM05D003635 ORTHO05D004283 1.7e-21 106.3 61 82.0
FAN06G2419 Fragaria x ananassa HOM05D003635 ORTHO05D004283 5.6e-20 101.3 154 40.9
FAN01G1416 Fragaria x ananassa HOM05D000005 ORTHO05D004283 9.6e-20 100.5 154 40.9
FAN10G2700 Fragaria x ananassa HOM05D003635 ORTHO05D004283 9.6e-20 100.5 154 40.9
FvH4_7g20980 Fragaria vesca HOM05D003635 ORTHO05D004283 1.3e-19 100.1 154 40.9
FAN06G4735 Fragaria x ananassa HOM05D003635 ORTHO05D004283 1.3e-19 100.1 154 40.9
Haze_26580 Corylus avellana HOM05D003635 ORTHO05D004283 2.0e-17 92.8 154 37.0
FAN03G1481 Fragaria x ananassa HOM05D003635 ORTHO05D004283 1.9e-12 76.3 61 60.7
TPR.G35191 Trifolium pratense HOM05D003635 ORTHO05D004283 3.3e-12 75.5 119 42.0
Actinidia02986 Actinidia chinensis HOM05D003635 ORTHO05D004283 3.1e-10 68.9 39 82.1
Actinidia13851 Actinidia chinensis HOM05D003635 ORTHO05D004283 7.1e-07 57.8 56 55.4
GSVIVG01005970001 Vitis vinifera HOM05D003635 ORTHO05D004283 7.9e-06 54.3 72 47.2


User provided reference genes

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