Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0016731 Sechium edule HOM05D005848 ORTHO05D007532 0.0e+00 1183.3 592 100.0
CsaV3_2G028680 Cucumis sativus L. HOM05D005848 ORTHO05D007532 1.9e-272 942.2 645 75.2
MELO3C010940.2 Cucumis melo HOM05D005848 ORTHO05D007532 1.6e-271 939.1 646 75.4
ClCG08G015110 Citrullus lanatus HOM05D005848 ORTHO05D007532 9.0e-270 933.3 670 73.3
Sed0003570 Sechium edule HOM05D005848 ORTHO05D007532 2.2e-268 928.7 645 74.6
Cpa.g.sc36.76 Carica papaya HOM05D005848 ORTHO05D007532 6.7e-241 837.4 652 66.4
Dinv36081 Davidia involucrata HOM05D005848 ORTHO05D007532 9.7e-240 833.6 639 67.8
Prupe.1G379500 Prunus persica HOM05D005848 ORTHO05D007532 9.7e-240 833.6 644 67.7
MD08G1031900 Malus domestica HOM05D005848 ORTHO05D007532 1.3e-239 833.2 649 68.4
CiPaw.16G056600 Carya illinoinensis HOM05D005848 ORTHO05D007532 4.1e-238 828.2 648 67.7
Manes.18G027000 Manihot esculenta HOM05D005848 ORTHO05D007532 1.2e-237 826.6 651 66.7
TWI56G0568 Tripterygium wilfordii HOM05D005848 ORTHO05D007532 1.2e-237 826.6 644 67.2
Potri.002G260700 Populus trichocarpa HOM05D005848 ORTHO05D007532 2.9e-236 822.0 642 67.3
TWI36G0400 Tripterygium wilfordii HOM05D005848 ORTHO05D007532 2.1e-234 815.8 646 65.5
Cfa018151 Carpinus fangiana HOM05D005848 ORTHO05D007532 2.3e-233 812.4 644 66.9
MD15G1027800 Malus domestica HOM05D005848 ORTHO05D007532 6.7e-233 810.8 645 66.5
TAR381G1506 Trochodendron aralioides HOM05D005848 ORTHO05D007532 6.7e-233 810.8 648 65.9
Lalb_Chr14g0369301 Lupinus albus HOM05D005848 ORTHO05D007532 2.0e-232 809.3 646 65.6
Thecc.08G026700 Theobroma cacao HOM05D005848 ORTHO05D007532 3.3e-232 808.5 640 66.4
Duzib116G0609 Durio zibethinus HOM05D005848 ORTHO05D007532 5.7e-232 807.7 637 65.9
QL02p008596 Quercus lobata HOM05D005848 ORTHO05D007532 1.3e-231 806.6 640 67.3
Nn1g04993 Nelumbo nucifera HOM05D005848 ORTHO05D007532 4.8e-231 804.7 646 65.2
COL.COLO4_26317 Corchorus olitorius HOM05D005848 ORTHO05D007532 6.3e-231 804.3 586 70.8
RcHm_v2.0_Chr6g0301031 Rosa chinensis HOM05D005848 ORTHO05D007532 8.2e-231 803.9 652 65.6
FAN20G0176 Fragaria x ananassa HOM05D005848 ORTHO05D007532 1.4e-230 803.1 648 65.3
FAN20G3094 Fragaria x ananassa HOM05D005848 ORTHO05D007532 1.4e-230 803.1 648 65.3
Rhsim07G0239300 Rhododendron simsii HOM05D005848 ORTHO05D007532 1.8e-230 802.7 643 65.8
CANSAT35G0174 Cannabis sativa HOM05D005848 ORTHO05D007532 7.0e-230 800.8 648 66.2
Haze_17969 Corylus avellana HOM05D005848 ORTHO05D007532 7.0e-230 800.8 642 66.4
FAN15G3081 Fragaria x ananassa HOM05D005848 ORTHO05D007532 2.7e-229 798.9 648 65.1
vmacro11198 Vaccinium macrocarpon HOM05D005848 ORTHO05D007532 3.5e-229 798.5 644 65.5
FAN27G0156 Fragaria x ananassa HOM05D005848 ORTHO05D007532 4.5e-229 798.1 650 65.1
FvH4_2g39810 Fragaria vesca HOM05D005848 ORTHO05D007532 5.9e-229 797.7 643 65.6
Sopen04g033930 Solanum pennellii HOM05D005848 ORTHO05D007532 1.3e-228 796.6 665 62.9
Sabra02G0198400 Salix brachista HOM05D005848 ORTHO05D007532 1.7e-228 796.2 643 66.3
Solyc04g080340.3 Solanum lycopersicum HOM05D005848 ORTHO05D007532 3.8e-228 795.0 665 62.7
Gorai.002G128000 Gossypium raimondii HOM05D005848 ORTHO05D007532 5.0e-228 794.7 646 65.0
Gohir.A01G115800 Gossypium hirsutum HOM05D005848 ORTHO05D007532 8.5e-228 793.9 646 64.9
vmacro04526 Vaccinium macrocarpon HOM05D005848 ORTHO05D007532 8.5e-228 793.9 645 65.1
Gohir.D01G104100 Gossypium hirsutum HOM05D005848 ORTHO05D007532 2.5e-227 792.3 646 64.9
Eucgr.F01897 Eucalyptus grandis HOM05D005848 ORTHO05D007532 3.2e-227 792.0 649 65.3
C06p49180 Brassica napus HOM05D005848 ORTHO05D007532 9.4e-227 790.4 647 64.0
Lj5g0008078 Lotus japonicus HOM05D005848 ORTHO05D007532 1.2e-226 790.0 640 65.2
A07p40790 Brassica napus HOM05D005848 ORTHO05D007532 4.7e-226 788.1 647 64.0
BraA07t31621Z Brassica rapa HOM05D005848 ORTHO05D007532 6.1e-226 787.7 647 64.0
THA.LOC104809061 Tarenaya hassleriana HOM05D005848 ORTHO05D007532 8.0e-226 787.3 644 62.6
BolC6t39951H Brassica oleracea HOM05D005848 ORTHO05D007532 1.0e-225 786.9 647 63.8
PGR031G0193 Punica granatum HOM05D005848 ORTHO05D007532 1.8e-225 786.2 644 65.1
Sp5g30360 Schrenkiella parvula HOM05D005848 ORTHO05D007532 2.3e-225 785.8 647 62.6
Phvul.001G014532 Phaseolus vulgaris HOM05D005848 ORTHO05D007532 3.0e-225 785.4 639 64.8
Glyma.17G250400 Glycine max HOM05D005848 ORTHO05D007532 5.2e-225 784.6 648 63.3
Sc02g0006150 Simmondsia chinensis HOM05D005848 ORTHO05D007532 8.8e-225 783.9 639 63.2
arahy.Tifrunner.gnm1.ann1.K656SJ Arachis hypogaea HOM05D005848 ORTHO05D007532 2.6e-224 782.3 644 63.8
arahy.Tifrunner.gnm1.ann1.R41T5G Arachis hypogaea HOM05D005848 ORTHO05D007532 2.6e-224 782.3 644 63.8
BraA07t30539Z Brassica rapa HOM05D005848 ORTHO05D007532 2.6e-224 782.3 644 63.5
CAN.G1226.12 Capsicum annuum HOM05D005848 ORTHO05D007532 2.6e-224 782.3 668 62.1
Ca_13375_v3 Cicer arietinum L. HOM05D005848 ORTHO05D007532 3.4e-224 781.9 648 63.6
PGSC0003DMG400004542 Solanum tuberosum HOM05D005848 ORTHO05D007532 3.4e-224 781.9 665 61.4
Psat6g008800 Pisum sativum HOM05D005848 ORTHO05D007532 4.4e-224 781.6 648 64.0
A07p28980 Brassica napus HOM05D005848 ORTHO05D007532 5.7e-224 781.2 646 63.5
Nitab4.5_0006280g0010 Nicotiana tabacum HOM05D005848 ORTHO05D007532 5.7e-224 781.2 662 62.2
Lj4A40T46 Lonicera japonica HOM05D005848 ORTHO05D007532 1.3e-223 780.0 643 64.7
VMungo0647G1182 Vigna mungo HOM05D005848 ORTHO05D007532 1.3e-223 780.0 647 63.7
Peaxi162Scf00417g01212 Petunia axillaris HOM05D005848 ORTHO05D007532 2.2e-223 779.2 659 62.4
Lsat_1_v5_gn_1_17721 Lactuca sativa HOM05D005848 ORTHO05D007532 2.8e-223 778.9 651 63.0
Nitab4.5_0005373g0030 Nicotiana tabacum HOM05D005848 ORTHO05D007532 3.7e-223 778.5 661 62.6
Aa31LG4G5410 Aethionema arabicum HOM05D005848 ORTHO05D007532 1.4e-222 776.5 644 63.0
Hund17082 Selenicereus undatus HOM05D005848 ORTHO05D007532 1.4e-222 776.5 644 62.7
TPR.G20173 Trifolium pratense HOM05D005848 ORTHO05D007532 3.1e-222 775.4 662 62.2
AL2G35110 Arabidopsis lyrata HOM05D005848 ORTHO05D007532 9.1e-222 773.9 647 63.1
Ah.05g173260 Amaranthus hybridus HOM05D005848 ORTHO05D007532 2.0e-221 772.7 649 61.5
AUR62013733 Chenopodium quinoa HOM05D005848 ORTHO05D007532 2.0e-221 772.7 649 61.6
Aqoxy6G01108 Aquilegia oxysepala HOM05D005848 ORTHO05D007532 7.7e-221 770.8 652 63.0
Carub.0002s2201 Capsella rubella HOM05D005848 ORTHO05D007532 2.3e-220 769.2 647 62.4
CARHR068530 Cardamine hirsuta HOM05D005848 ORTHO05D007532 6.6e-220 767.7 646 62.1
PSO675G8513 Papaver somniferum HOM05D005848 ORTHO05D007532 2.5e-219 765.8 639 62.8
PSO541G0294 Papaver somniferum HOM05D005848 ORTHO05D007532 3.3e-219 765.4 639 63.1
Glyma.14G075000 Glycine max HOM05D005848 ORTHO05D007532 5.5e-219 764.6 646 63.2
Thhalv10018304m.g Eutrema salsugineum HOM05D005848 ORTHO05D007532 1.2e-218 763.5 603 64.2
AT1G75200 Arabidopsis thaliana HOM05D005848 ORTHO05D007532 2.1e-218 762.7 647 62.3
MBI16_g31221_MAGBIO Magnolia biondii HOM05D005848 ORTHO05D007532 2.8e-218 762.3 648 62.3
EL10Ac1g00774 Beta vulgaris HOM05D005848 ORTHO05D007532 3.6e-218 761.9 681 59.3
SalBow7G2715 Salvia bowleyana HOM05D005848 ORTHO05D007532 3.6e-218 761.9 646 62.7
DCAR_020974 Daucus carota HOM05D005848 ORTHO05D007532 1.4e-217 760.0 613 64.3
Migut.C00727 Erythranthe guttata HOM05D005848 ORTHO05D007532 1.8e-217 759.6 663 62.1
CSS0006033 Camellia sinensis var. sinensis HOM05D005848 ORTHO05D007532 3.0e-217 758.8 587 68.0
Oeu049954.1 Olea europaea HOM05D005848 ORTHO05D007532 5.2e-217 758.1 660 62.3
HanXRQChr02g0042111 Helianthus annuus HOM05D005848 ORTHO05D007532 1.2e-216 756.9 619 64.3
SGA_v2.0_scaffold54G19521 Striga asiatica HOM05D005848 ORTHO05D007532 1.2e-213 746.9 672 60.3
CDE01G0181 Ceratophyllum demersum HOM05D005848 ORTHO05D007532 7.8e-213 744.2 660 59.7
Actinidia22546 Actinidia chinensis HOM05D005848 ORTHO05D007532 1.0e-212 743.8 619 64.8
Ciclev10003946m.g Citrus clementina HOM05D005848 ORTHO05D007532 8.6e-212 740.7 586 65.2
ECA247G2683 Erigeron canadensis HOM05D005848 ORTHO05D007532 6.8e-209 731.1 649 60.4
HPP92_012274 Vanilla planifolia HOM05D005848 ORTHO05D007532 4.6e-205 718.4 640 59.5
C06p32750 Brassica napus HOM05D005848 ORTHO05D007532 1.2e-200 703.7 604 63.2
Atru.chr13.482 Acer truncatum HOM05D005848 ORTHO05D007532 1.5e-200 703.4 413 82.6
unitig_37.g12994 Utricularia gibba HOM05D005848 ORTHO05D007532 7.5e-200 701.0 642 58.7
BolC6t38398H Brassica oleracea HOM05D005848 ORTHO05D007532 9.8e-200 700.7 611 62.4
GSVIVG01009707001 Vitis vinifera HOM05D005848 ORTHO05D007532 1.7e-199 699.9 453 76.6
Zm00001eb059170 Zea mays HOM05D005848 ORTHO05D007532 1.7e-196 689.9 637 58.4
arahy.Tifrunner.gnm1.ann1.U1EDB6 Arachis hypogaea HOM05D005848 ORTHO05D007532 1.5e-195 686.8 656 58.1
ATR0733G119 Amborella trichopoda HOM05D005848 ORTHO05D007532 2.8e-194 682.6 716 54.3
BcaB02g07015 Brassica carinata HOM05D005848 ORTHO05D007532 8.1e-194 681.0 457 73.3
AUR62023420 Chenopodium quinoa HOM05D005848 ORTHO05D007532 7.5e-192 674.5 649 56.1
SMO119G0034 Selaginella moellendorffii HOM05D005848 ORTHO05D007532 7.8e-189 664.5 600 58.8
Os03g0775300 Oryza sativa ssp. japonica HOM05D005848 ORTHO05D007532 8.6e-188 661.0 554 63.2
Pp3c8_14160 Physcomitrium patens HOM05D005848 ORTHO05D007532 4.3e-187 658.7 635 56.2
Mapoly0010s0191 Marchantia polymorpha HOM05D005848 ORTHO05D007532 3.4e-184 649.0 626 56.5
AagrBONN_evm.TU.Sc2ySwM_362.2225 Anthoceros agrestis HOM05D005848 ORTHO05D007532 5.4e-182 641.7 628 54.8
vmacro04525 Vaccinium macrocarpon HOM05D005848 ORTHO05D007532 3.5e-181 639.0 408 77.0
MCO11G535 Micromonas commoda HOM05D005848 ORTHO05D007532 2.0e-152 543.5 623 49.1
Cre14.g623300 Chlamydomonas reinhardtii HOM05D005848 ORTHO05D007532 6.1e-141 505.4 587 47.5
PRCOL_00005119 Prasinoderma coloniale HOM05D005848 ORTHO05D007532 5.5e-134 482.3 428 55.8
CBR_g42175 Chara braunii HOM05D005848 ORTHO05D007532 2.0e-131 473.8 325 69.8
Actinidia15328 Actinidia chinensis HOM05D005848 ORTHO05D007532 2.9e-127 459.9 615 45.4
Cc10_g02890 Coffea canephora HOM05D005848 ORTHO05D007532 2.2e-119 433.7 261 78.9
Medtr1g022225 Medicago truncatula HOM05D005848 ORTHO05D007532 4.0e-116 422.9 258 77.9
MSTRG.1277 Avicennia marina HOM05D005848 ORTHO05D007532 6.8e-116 422.2 455 54.3
Cfa025522 Carpinus fangiana HOM05D005848 ORTHO05D007532 1.0e-111 408.3 486 49.2
QL02p008579 Quercus lobata HOM05D005848 ORTHO05D007532 1.1e-105 388.3 236 79.7
Medtr1g022235 Medicago truncatula HOM05D005848 ORTHO05D007532 1.4e-97 361.3 382 55.2
Cc10_g02880 Coffea canephora HOM05D005848 ORTHO05D007532 3.1e-92 343.6 393 52.2
arahy.Tifrunner.gnm1.ann1.SF2S3L Arachis hypogaea HOM05D003791 ORTHO05D004961 3.2e-65 253.8 176 69.9
CiPaw.16G057000 Carya illinoinensis HOM05D005848 ORTHO05D007532 1.0e-34 152.5 132 62.1
Os10g0365900 Oryza sativa ssp. japonica HOM05D005848 ORTHO05D007532 5.0e-34 150.2 104 70.2
arahy.Tifrunner.gnm1.ann1.B18DRP Arachis hypogaea HOM05D005848 ORTHO05D007532 4.6e-32 143.7 253 40.3
Gohir.D05G197166 Gossypium hirsutum HOM05D005848 ORTHO05D007532 1.2e-24 119.0 81 70.4
Hma1.2p1_1139F.1_g260870 Hydrangea macrophylla HOM05D005848 ORTHO05D007532 7.9e-24 116.3 68 80.9
Nn7g38354 Nelumbo nucifera HOM05D005848 ORTHO05D007532 3.6e-16 90.9 59 71.2
Lj6g0011150 Lotus japonicus HOM05D000370 ORTHO05D001366 3.7e-13 80.9 63 65.1
arahy.Tifrunner.gnm1.ann1.T0WXUF Arachis hypogaea HOM05D005848 ORTHO05D038829 1.4e-12 79.0 73 57.5
Lj1g0001767 Lotus japonicus HOM05D005848 ORTHO05D038829 1.4e-12 79.0 48 75.0
arahy.Tifrunner.gnm1.ann1.WCXU76 Arachis hypogaea HOM05D008504 ORTHO05D010707 1.8e-12 78.6 155 38.7
arahy.Tifrunner.gnm1.ann1.PBP9SE Arachis hypogaea HOM05D008504 ORTHO05D010707 3.1e-12 77.8 174 37.9
arahy.Tifrunner.gnm1.ann1.UJY401 Arachis hypogaea HOM05D008504 ORTHO05D010707 3.1e-12 77.8 174 37.9
arahy.Tifrunner.gnm1.ann1.HMY8CZ Arachis hypogaea HOM05D008504 ORTHO05D010707 7.0e-12 76.6 100 46.0
arahy.Tifrunner.gnm1.ann1.3X8B6N Arachis hypogaea HOM05D008504 ORTHO05D010707 1.2e-11 75.9 155 38.1
arahy.Tifrunner.gnm1.ann1.A1ZBG7 Arachis hypogaea HOM05D008504 ORTHO05D010707 1.6e-11 75.5 99 46.5
arahy.Tifrunner.gnm1.ann1.QZ4EVV Arachis hypogaea HOM05D008504 ORTHO05D010707 1.6e-11 75.5 99 46.5
arahy.Tifrunner.gnm1.ann1.5K2DU6 Arachis hypogaea HOM05D008504 ORTHO05D010707 3.5e-11 74.3 159 37.1
arahy.Tifrunner.gnm1.ann1.FHH1YD Arachis hypogaea HOM05D008504 ORTHO05D010707 2.2e-10 71.6 101 45.5
arahy.Tifrunner.gnm1.ann1.QMM8JA Arachis hypogaea HOM05D008504 ORTHO05D010707 2.2e-10 71.6 153 37.3
arahy.Tifrunner.gnm1.ann1.L2A829 Arachis hypogaea HOM05D008504 ORTHO05D010707 3.8e-10 70.9 133 39.1
CBR_g26428 Chara braunii HOM05D005848 ORTHO05D007532 5.0e-10 70.5 84 40.5
arahy.Tifrunner.gnm1.ann1.HCH4H8 Arachis hypogaea HOM05D008504 ORTHO05D010707 1.5e-09 68.9 65 55.4
arahy.Tifrunner.gnm1.ann1.XH95LH Arachis hypogaea HOM05D008504 ORTHO05D010707 1.5e-09 68.9 65 55.4
arahy.Tifrunner.gnm1.ann1.0TG4XQ Arachis hypogaea HOM05D008504 ORTHO05D010707 4.2e-09 67.4 109 45.0
arahy.Tifrunner.gnm1.ann1.2I4AA8 Arachis hypogaea HOM05D008504 ORTHO05D010707 4.2e-09 67.4 109 45.0
arahy.Tifrunner.gnm1.ann1.5RQB9J Arachis hypogaea HOM05D008504 ORTHO05D010707 4.2e-09 67.4 109 45.0
arahy.Tifrunner.gnm1.ann1.PE8RGD Arachis hypogaea HOM05D008504 ORTHO05D010707 4.2e-09 67.4 109 45.0
arahy.Tifrunner.gnm1.ann1.DKU1F8 Arachis hypogaea HOM05D008504 ORTHO05D010707 1.2e-08 65.9 109 43.1
arahy.Tifrunner.gnm1.ann1.0E19IK Arachis hypogaea HOM05D008504 ORTHO05D010707 2.1e-08 65.1 91 42.9
arahy.Tifrunner.gnm1.ann1.RM5ZHJ Arachis hypogaea HOM05D008504 ORTHO05D010707 2.1e-08 65.1 123 38.2
arahy.Tifrunner.gnm1.ann1.W88FQP Arachis hypogaea HOM05D008504 ORTHO05D010707 2.1e-08 65.1 123 38.2
arahy.Tifrunner.gnm1.ann1.CY9GMY Arachis hypogaea HOM05D008504 ORTHO05D010707 4.7e-08 63.9 91 41.8
arahy.Tifrunner.gnm1.ann1.XQPR1E Arachis hypogaea HOM05D008504 ORTHO05D010707 8.0e-08 63.2 111 42.3
arahy.Tifrunner.gnm1.ann1.NP4SZW Arachis hypogaea HOM05D008504 ORTHO05D010707 1.8e-07 62.0 73 52.1
arahy.Tifrunner.gnm1.ann1.3C5L0V Arachis hypogaea HOM05D008504 ORTHO05D010707 2.3e-07 61.6 123 37.4
arahy.Tifrunner.gnm1.ann1.978BNZ Arachis hypogaea HOM05D008504 ORTHO05D010707 2.3e-07 61.6 123 37.4
Gohir.D05G197232 Gossypium hirsutum HOM05D005848 ORTHO05D047491 2.3e-07 61.6 53 49.1
Gorai.009G202100 Gossypium raimondii HOM05D005848 ORTHO05D047491 2.3e-07 61.6 53 49.1
arahy.Tifrunner.gnm1.ann1.00W0BQ Arachis hypogaea HOM05D008504 ORTHO05D010707 5.2e-07 60.5 73 52.1
arahy.Tifrunner.gnm1.ann1.MCNZ84 Arachis hypogaea HOM05D008504 ORTHO05D010707 5.2e-07 60.5 73 52.1
arahy.Tifrunner.gnm1.ann1.B27QWS Arachis hypogaea HOM05D008504 ORTHO05D010707 8.8e-07 59.7 73 50.7
arahy.Tifrunner.gnm1.ann1.ERGP6F Arachis hypogaea HOM05D008504 ORTHO05D010707 8.8e-07 59.7 123 36.6
arahy.Tifrunner.gnm1.ann1.F5F6FM Arachis hypogaea HOM05D008504 ORTHO05D010707 8.8e-07 59.7 73 50.7
arahy.Tifrunner.gnm1.ann1.J252LG Arachis hypogaea HOM05D008504 ORTHO05D010707 8.8e-07 59.7 54 55.6
Gohir.A05G194001 Gossypium hirsutum HOM05D005848 ORTHO05D218087 1.5e-06 58.9 40 60.0
arahy.Tifrunner.gnm1.ann1.2PI4SD Arachis hypogaea HOM05D008504 ORTHO05D010707 2.0e-06 58.5 115 37.4
arahy.Tifrunner.gnm1.ann1.3HSW25 Arachis hypogaea HOM05D008504 ORTHO05D010707 2.0e-06 58.5 115 37.4
arahy.Tifrunner.gnm1.ann1.D90TM1 Arachis hypogaea HOM05D008504 ORTHO05D010707 3.3e-06 57.8 121 36.4


User provided reference genes

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