Gene: Zm00001eb059170

General Information

Structural Information

  • Species Zea mays
  • Gene Identifier Zm00001eb059170
  • Transcript Identifier Zm00001eb059170_T001
  • Gene Type Coding gene
  • Location 1 : 289609042-289612476 : positive

Gene Family Information

  • ID HOM05D005848
  • #Genes/#Species 134/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Zm00001eb059170_T001
  • pid Zm00001eb059170_P001
  • uniprot A0A317YG62
  • uniprot A0A1D6L6E5
  • uniprot B4FXB4
  • V4_identifier Zm00001d034251

Descriptions

  • Description Zm00001e005848
  • Description S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008033
IEA
GOA DatabasetRNA processing
GO:0008033
IEA
InterProtRNA processing
GO:0031591
IBA
GOA Databasewybutosine biosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0102521
IEA
GOA DatabasetRNA-4-demethylwyosine synthase activity
GO:0051539
IEA
GOA Database4 iron, 4 sulfur cluster binding
GO:0051539
IEA
InterPro4 iron, 4 sulfur cluster binding
GO:0051536
IEA
GOA Databaseiron-sulfur cluster binding
GO:0051536
IEA
InterProiron-sulfur cluster binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0016829
IEA
GOA Databaselyase activity
GO:0010181
IEA
GOA DatabaseFMN binding
GO:0010181
IEA
InterProFMN binding
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
IEA
GOA Databasemitochondrion

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR029039 Flavoprotein-like superfamily
IPR034556 S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase
IPR001094 Flavodoxin-like
IPR008254 Flavodoxin/nitric oxide synthase
IPR013785 Aldolase-type TIM barrel
IPR007197 Radical SAM
IPR013917 tRNA wybutosine-synthesis
Mapman id Description
35.1 not assigned.annotated