Gene: Lsat_1_v5_gn_1_17721

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_1_17721
  • Transcript Identifier Lsat_1_v5_gn_1_17721.1
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_1 : 21362380-21365412 : negative

Gene Family Information

  • ID HOM05D005848
  • #Genes/#Species 134/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_1_17721.v5
  • pacid 38942734

Descriptions

  • Description 4.1.3.44 - tRNA 4-demethylwyosine synthase (AdoMet-dependent)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008033
IEA
InterProtRNA processing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010181
IEA
InterProFMN binding
GO:0003824
IEA
InterProcatalytic activity
GO:0051536
IEA
InterProiron-sulfur cluster binding
GO:0051539
IEA
InterPro4 iron, 4 sulfur cluster binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT1G75200

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR008254 Flavodoxin/nitric oxide synthase
IPR007197 Radical SAM
IPR034556 S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase
IPR013785 Aldolase-type TIM barrel
IPR029039 Flavoprotein-like superfamily
IPR013917 tRNA wybutosine-synthesis
IPR001094 Flavodoxin-like
Mapman id Description
35.1 not assigned.annotated