Gene: Lj5g0008078

General Information

Structural Information

  • Species Lotus japonicus
  • Gene Identifier Lj5g0008078
  • Transcript Identifier Lj5g0008078.1
  • Gene Type Coding gene
  • Location chr5 : 62668999-62673234 : negative

Gene Family Information

  • ID HOM05D005848
  • #Genes/#Species 134/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lj5g0008078.Lj1.0v1
  • pacid 44924501

Descriptions

  • Description K15449 - tRNA wybutosine-synthesizing protein 1 [EC:4.1.3.44] (TYW1)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008033
IEA
InterProtRNA processing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003824
IEA
InterProcatalytic activity
GO:0051539
IEA
InterPro4 iron, 4 sulfur cluster binding
GO:0010181
IEA
InterProFMN binding
GO:0051536
IEA
InterProiron-sulfur cluster binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT1G75200

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013785 Aldolase-type TIM barrel
IPR034556 S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase
IPR008254 Flavodoxin/nitric oxide synthase
IPR029039 Flavoprotein-like superfamily
IPR013917 tRNA wybutosine-synthesis
IPR007197 Radical SAM
IPR001094 Flavodoxin-like
Mapman id Description
35.1 not assigned.annotated