Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0014830 Sechium edule HOM05D003957 ORTHO05D004833 2.4e-259 898.3 433 100.0
MELO3C023982.2 Cucumis melo HOM05D003957 ORTHO05D004833 2.8e-236 821.6 433 91.2
CsaV3_3G032090 Cucumis sativus L. HOM05D003957 ORTHO05D004833 1.1e-235 819.7 433 91.0
ClCG10G012310 Citrullus lanatus HOM05D003957 ORTHO05D004833 6.4e-233 810.4 433 90.3
Cfa010778 Carpinus fangiana HOM05D003957 ORTHO05D004833 9.1e-203 710.3 429 79.7
Sed0012226 Sechium edule HOM05D003957 ORTHO05D004833 1.2e-202 709.9 377 89.9
Atru.chr11.2608 Acer truncatum HOM05D003957 ORTHO05D004833 1.4e-198 696.4 429 76.5
Ciclev10031578m.g Citrus clementina HOM05D003957 ORTHO05D004833 7.4e-197 690.6 429 75.5
CiPaw.14G000800 Carya illinoinensis HOM05D003957 ORTHO05D004833 5.3e-195 684.5 432 75.9
Thecc.01G409500 Theobroma cacao HOM05D003957 ORTHO05D004833 2.3e-190 669.1 430 74.0
Dinv09346 Davidia involucrata HOM05D003957 ORTHO05D004833 1.2e-189 666.8 429 74.1
Oeu014587.1 Olea europaea HOM05D003957 ORTHO05D004833 6.3e-188 661.0 425 73.6
GSVIVG01032128001 Vitis vinifera HOM05D003957 ORTHO05D004833 8.3e-188 660.6 401 78.3
Potri.001G264900 Populus trichocarpa HOM05D003957 ORTHO05D004833 4.1e-187 658.3 440 73.4
Ca_19580_v3 Cicer arietinum L. HOM05D003957 ORTHO05D004833 1.7e-185 652.9 428 72.2
Glyma.08G090300 Glycine max HOM05D003957 ORTHO05D004833 2.2e-185 652.5 429 72.7
TPR.G3690 Trifolium pratense HOM05D003957 ORTHO05D004833 6.5e-185 651.0 435 72.2
Manes.10G140900 Manihot esculenta HOM05D003957 ORTHO05D004833 8.5e-185 650.6 372 79.8
Eucgr.J01212 Eucalyptus grandis HOM05D003957 ORTHO05D004833 1.1e-184 650.2 428 72.0
TWI09G1258 Tripterygium wilfordii HOM05D003957 ORTHO05D004833 1.5e-184 649.8 428 74.8
Sabra09G0044100 Salix brachista HOM05D003957 ORTHO05D004833 4.2e-184 648.3 436 71.6
Cc07_g18910 Coffea canephora HOM05D003957 ORTHO05D004833 7.2e-184 647.5 429 70.9
COL.COLO4_04863 Corchorus olitorius HOM05D003957 ORTHO05D004833 7.2e-184 647.5 421 73.4
Lj3g0013934 Lotus japonicus HOM05D003957 ORTHO05D004833 9.4e-184 647.1 429 72.0
Prupe.2G015300 Prunus persica HOM05D003957 ORTHO05D004833 1.0e-182 643.7 368 80.2
arahy.Tifrunner.gnm1.ann1.X54W53 Arachis hypogaea HOM05D003957 ORTHO05D004833 4.0e-182 641.7 431 71.7
CiPaw.13G005800 Carya illinoinensis HOM05D003957 ORTHO05D004833 8.8e-182 640.6 404 75.5
Sabra16G0162800 Salix brachista HOM05D003957 ORTHO05D004833 1.5e-181 639.8 465 68.8
TWI73G1181 Tripterygium wilfordii HOM05D003957 ORTHO05D004833 3.4e-181 638.6 372 80.1
arahy.Tifrunner.gnm1.ann1.MG259H Arachis hypogaea HOM05D003957 ORTHO05D004833 4.4e-181 638.3 426 71.4
Nitab4.5_0002918g0090 Nicotiana tabacum HOM05D003531 ORTHO05D004833 4.4e-181 638.3 420 72.6
MSTRG.20577 Avicennia marina HOM05D003957 ORTHO05D004833 7.5e-181 637.5 429 70.6
Gohir.D08G164700 Gossypium hirsutum HOM05D003957 ORTHO05D004833 2.8e-180 635.6 374 78.9
PGR044G1355 Punica granatum HOM05D003957 ORTHO05D004833 3.7e-180 635.2 430 71.4
Cpa.g.sc125.12 Carica papaya HOM05D003957 ORTHO05D004833 4.8e-180 634.8 372 78.5
Gohir.A08G143700 Gossypium hirsutum HOM05D003957 ORTHO05D004833 1.1e-179 633.6 374 78.9
RcHm_v2.0_Chr1g0316511 Rosa chinensis HOM05D003957 ORTHO05D004833 2.4e-179 632.5 432 70.1
Phvul.011G009800 Phaseolus vulgaris HOM05D003957 ORTHO05D004833 5.4e-179 631.3 429 69.9
Actinidia20662 Actinidia chinensis HOM05D003957 ORTHO05D004833 9.1e-179 630.6 429 69.5
HanXRQChr01g0016501 Helianthus annuus HOM05D003957 ORTHO05D004833 9.1e-179 630.6 430 71.2
Potri.009G059900 Populus trichocarpa HOM05D003957 ORTHO05D004833 1.6e-178 629.8 378 78.3
MD02G1308500 Malus domestica HOM05D003957 ORTHO05D004833 2.7e-178 629.0 364 79.4
MD07G1012900 Malus domestica HOM05D003957 ORTHO05D004833 4.5e-178 628.2 364 78.3
SalBow5G3453 Salvia bowleyana HOM05D003957 ORTHO05D004833 7.7e-178 627.5 429 69.2
CANSAT80G0271 Cannabis sativa HOM05D003957 ORTHO05D004833 1.0e-177 627.1 419 71.8
FvH4_7g01180 Fragaria vesca HOM05D003957 ORTHO05D004833 1.0e-177 627.1 367 78.7
Nitab4.5_0008353g0020 Nicotiana tabacum HOM05D003957 ORTHO05D004833 1.0e-177 627.1 404 73.3
Psat5g208720 Pisum sativum HOM05D003957 ORTHO05D004833 1.3e-177 626.7 370 78.6
QL04p008303 Quercus lobata HOM05D003957 ORTHO05D004833 1.3e-177 626.7 377 79.8
SalBow5G1725 Salvia bowleyana HOM05D003957 ORTHO05D004833 3.8e-177 625.2 429 69.0
Lalb_Chr25g0282971 Lupinus albus HOM05D003957 ORTHO05D004833 5.0e-177 624.8 374 77.8
Peaxi162Scf00953g00417 Petunia axillaris HOM05D003957 ORTHO05D004833 1.1e-176 623.6 428 69.6
Medtr4g037515 Medicago truncatula HOM05D003957 ORTHO05D004833 1.9e-176 622.9 434 70.5
SGA_v2.0_scaffold119G32740 Striga asiatica HOM05D003957 ORTHO05D004833 1.9e-176 622.9 433 69.3
Rhsim01G0129100 Rhododendron simsii HOM05D003957 ORTHO05D004833 3.3e-176 622.1 421 70.3
Glyma.10G089600 Glycine max HOM05D003957 ORTHO05D004833 4.2e-176 621.7 373 77.5
Gorai.004G171700 Gossypium raimondii HOM05D003957 ORTHO05D004833 5.5e-176 621.3 469 66.1
VMungo1080G1779 Vigna mungo HOM05D003957 ORTHO05D004833 7.2e-176 620.9 375 76.8
TPR.G35301 Trifolium pratense HOM05D003957 ORTHO05D004833 2.8e-175 619.0 377 77.2
VMungo1127G1153 Vigna mungo HOM05D003957 ORTHO05D004833 1.0e-174 617.1 469 64.2
THA.LOC104809852 Tarenaya hassleriana HOM05D003957 ORTHO05D004833 1.8e-174 616.3 368 75.5
EL10Ac2g04341 Beta vulgaris HOM05D003531 ORTHO05D004354 2.3e-174 615.9 427 69.1
ECA248G0218 Erigeron canadensis HOM05D003957 ORTHO05D004833 3.0e-174 615.5 394 73.9
Migut.B01290 Erythranthe guttata HOM05D003957 ORTHO05D004833 8.9e-174 614.0 432 68.5
Sopen01g034330 Solanum pennellii HOM05D003957 ORTHO05D004833 3.4e-173 612.1 430 69.8
AUR62009393 Chenopodium quinoa HOM05D003957 ORTHO05D004833 5.7e-173 611.3 427 68.1
PGSC0003DMG400006795 Solanum tuberosum HOM05D003957 ORTHO05D004833 7.5e-173 610.9 430 69.8
Phvul.005G024600 Phaseolus vulgaris HOM05D003957 ORTHO05D004833 1.3e-172 610.1 373 75.9
THA.LOC104817580 Tarenaya hassleriana HOM05D003957 ORTHO05D004833 1.3e-172 610.1 368 74.5
FAN06G1255 Fragaria x ananassa HOM05D003957 ORTHO05D004833 1.7e-172 609.8 427 69.3
Lj3g0028128 Lotus japonicus HOM05D003957 ORTHO05D004833 2.2e-172 609.4 373 76.7
Medtr3g030890 Medicago truncatula HOM05D003957 ORTHO05D004833 2.8e-172 609.0 373 76.1
Solyc01g087290.3 Solanum lycopersicum HOM05D003957 ORTHO05D004833 3.7e-172 608.6 430 69.8
CSS0035789 Camellia sinensis var. sinensis HOM05D003957 ORTHO05D004833 4.9e-172 608.2 371 77.1
Hund21483 Selenicereus undatus HOM05D003957 ORTHO05D004833 4.9e-172 608.2 426 68.3
FAN03G2622 Fragaria x ananassa HOM05D003957 ORTHO05D004833 6.3e-172 607.8 427 69.1
FAN10G3195 Fragaria x ananassa HOM05D003957 ORTHO05D004833 2.4e-171 605.9 427 68.9
arahy.Tifrunner.gnm1.ann1.N7MVRX Arachis hypogaea HOM05D003957 ORTHO05D004833 4.1e-171 605.1 370 76.2
CAN.G219.36 Capsicum annuum HOM05D003957 ORTHO05D004833 4.1e-171 605.1 419 69.5
A06p39430 Brassica napus HOM05D003957 ORTHO05D004833 1.0e-169 600.5 374 73.3
BraA06t26858Z Brassica rapa HOM05D003957 ORTHO05D004833 1.0e-169 600.5 374 73.3
AL8G20240 Arabidopsis lyrata HOM05D003957 ORTHO05D004833 2.9e-169 599.0 372 72.8
MBI02_g05667_MAGBIO Magnolia biondii HOM05D003957 ORTHO05D004833 2.9e-169 599.0 448 63.8
Carub.0008s0751 Capsella rubella HOM05D003957 ORTHO05D004833 3.9e-169 598.6 372 72.6
Nn2g15304 Nelumbo nucifera HOM05D003957 ORTHO05D004833 5.0e-169 598.2 428 67.3
AT5G47970 Arabidopsis thaliana HOM05D003957 ORTHO05D004833 6.6e-169 597.8 372 72.3
PSO339G1767 Papaver somniferum HOM05D003957 ORTHO05D004833 6.6e-169 597.8 430 66.7
Thhalv10004383m.g Eutrema salsugineum HOM05D003957 ORTHO05D004833 8.6e-169 597.4 365 74.0
BolC7t44403H Brassica oleracea HOM05D003957 ORTHO05D004833 1.5e-168 596.7 370 73.2
C07p38840 Brassica napus HOM05D003957 ORTHO05D004833 9.5e-168 594.0 370 73.0
AL5G46370 Arabidopsis lyrata HOM05D003957 ORTHO05D004833 2.1e-167 592.8 369 72.4
CARHR184310 Cardamine hirsuta HOM05D003957 ORTHO05D004833 2.1e-167 592.8 372 72.3
Ca_14452_v3 Cicer arietinum L. HOM05D003957 ORTHO05D004833 3.6e-167 592.0 363 76.0
Ca_14453_v3 Cicer arietinum L. HOM05D003957 ORTHO05D004833 3.6e-167 592.0 363 76.0
Sp2g18450 Schrenkiella parvula HOM05D003957 ORTHO05D004833 3.6e-167 592.0 366 73.2
AT3G63510 Arabidopsis thaliana HOM05D003957 ORTHO05D004833 8.0e-167 590.9 369 72.4
Thhalv10023495m.g Eutrema salsugineum HOM05D003957 ORTHO05D004833 1.4e-166 590.1 369 70.7
Sopen01g034340 Solanum pennellii HOM05D003957 ORTHO05D004833 1.4e-166 590.1 373 74.5
PSO384G3990 Papaver somniferum HOM05D003957 ORTHO05D004833 1.8e-166 589.7 377 71.4
Solyc01g087300.3 Solanum lycopersicum HOM05D003957 ORTHO05D004833 3.1e-166 589.0 373 74.3
Lsat_1_v5_gn_1_106241 Lactuca sativa HOM05D003957 ORTHO05D004833 4.0e-166 588.6 433 66.1
BcaC06g30833 Brassica carinata HOM05D003957 ORTHO05D004833 1.2e-165 587.0 370 73.0
TAR623G1381 Trochodendron aralioides HOM05D003957 ORTHO05D004833 1.5e-165 586.6 363 74.9
DCAR_003217 Daucus carota HOM05D003957 ORTHO05D004833 1.7e-164 583.2 384 71.4
BraA07t31319Z Brassica rapa HOM05D003957 ORTHO05D004833 2.9e-164 582.4 366 71.9
ATR0332G004 Amborella trichopoda HOM05D003957 ORTHO05D004833 6.4e-164 581.3 428 65.2
Sp5g26390 Schrenkiella parvula HOM05D003957 ORTHO05D004833 8.3e-164 580.9 369 70.2
BcaB03g14880 Brassica carinata HOM05D003957 ORTHO05D004833 1.1e-163 580.5 366 71.6
BcaC08g46558 Brassica carinata HOM05D003957 ORTHO05D004833 1.6e-162 576.6 366 70.8
BolC6t39590H Brassica oleracea HOM05D003957 ORTHO05D004833 1.6e-162 576.6 366 70.8
CAN.G219.37 Capsicum annuum HOM05D003957 ORTHO05D004833 1.7e-161 573.2 354 75.7
A07p37580 Brassica napus HOM05D003957 ORTHO05D004833 1.5e-160 570.1 391 67.3
Aqoxy1G00278 Aquilegia oxysepala HOM05D003957 ORTHO05D004833 2.5e-160 569.3 435 63.0
C06p45340 Brassica napus HOM05D003957 ORTHO05D004833 5.2e-158 561.6 391 66.2
Aa31LG5G18360 Aethionema arabicum HOM05D003957 ORTHO05D004833 1.2e-157 560.5 401 64.3
AUR62023075 Chenopodium quinoa HOM05D003957 ORTHO05D004833 2.4e-155 552.7 400 65.5
AUR62043481 Chenopodium quinoa HOM05D003957 ORTHO05D004833 2.4e-155 552.7 400 65.5
Os04g0278900 Oryza sativa ssp. japonica HOM05D003957 ORTHO05D004833 4.3e-152 542.0 350 69.1
Sc11g0009110 Simmondsia chinensis HOM05D003957 ORTHO05D004833 5.2e-150 535.0 319 77.1
arahy.Tifrunner.gnm1.ann1.74EFZ5 Arachis hypogaea HOM05D003957 ORTHO05D004833 3.0e-145 519.2 370 67.3
SEGI_24417 Sequoiadendron giganteum HOM05D003957 ORTHO05D004833 2.8e-143 512.7 334 69.2
Zm00001eb087020 Zea mays HOM05D003957 ORTHO05D004833 8.1e-143 511.1 325 70.2
Lj7A573G28 Lonicera japonica HOM05D003957 ORTHO05D004833 1.8e-142 510.0 383 65.3
DCAR_029679 Daucus carota HOM05D003957 ORTHO05D004833 7.6e-141 504.6 325 71.7
vmacro21189 Vaccinium macrocarpon HOM05D003957 ORTHO05D004833 1.9e-139 500.0 400 63.5
HPP92_026038 Vanilla planifolia HOM05D003957 ORTHO05D004833 7.8e-138 494.6 339 64.9
Psat7g196440 Pisum sativum HOM05D003957 ORTHO05D004833 4.9e-132 475.3 317 71.0
Mapoly0013s0118 Marchantia polymorpha HOM05D003957 ORTHO05D004833 1.4e-131 473.8 375 59.2
Aa31LG10G17380 Aethionema arabicum HOM05D003957 ORTHO05D004833 4.3e-128 462.2 350 61.4
Glyma.05G135100 Glycine max HOM05D003957 ORTHO05D004833 7.3e-128 461.5 303 73.3
Duzib138G0145 Durio zibethinus HOM05D003957 ORTHO05D004833 1.7e-124 450.3 430 54.9
unitig_749.g14329 Utricularia gibba HOM05D003957 ORTHO05D004833 2.9e-124 449.5 353 61.2
Pp3s97_50 Physcomitrium patens HOM05D003957 ORTHO05D004833 7.9e-122 441.4 363 57.3
SMO174G0131 Selaginella moellendorffii HOM05D003957 ORTHO05D004833 3.4e-117 426.0 322 60.6
Lalb_Chr01g0000361 Lupinus albus HOM05D003957 ORTHO05D004833 1.5e-112 410.6 258 75.2
Pp3c7_21950 Physcomitrium patens HOM05D003957 ORTHO05D004833 6.2e-111 405.2 359 55.2
AagrBONN_evm.TU.Sc2ySwM_117.3237 Anthoceros agrestis HOM05D003957 ORTHO05D004833 9.0e-110 401.4 295 62.0
CBR_g45512 Chara braunii HOM05D003957 ORTHO05D004833 7.9e-106 388.3 331 51.4
Carub.0005s3012 Capsella rubella HOM05D003957 ORTHO05D004833 2.5e-104 383.3 259 68.0
HPP92_013484 Vanilla planifolia HOM05D003957 ORTHO05D004833 6.1e-98 362.1 282 61.7
CARHR291460 Cardamine hirsuta HOM05D003957 ORTHO05D004833 1.5e-88 330.9 189 78.8
MCO14G372 Micromonas commoda HOM05D003957 ORTHO05D004833 1.7e-84 317.4 362 45.6
Oeu006567.1 Olea europaea HOM05D003957 ORTHO05D004833 2.1e-82 310.5 373 45.8
Aa31LG11G7420 Aethionema arabicum HOM05D003957 ORTHO05D004833 2.7e-69 266.9 152 79.6
Cre15.g636896 Chlamydomonas reinhardtii HOM05D003957 ORTHO05D004833 5.7e-64 249.2 555 29.0
PRCOL_00006504 Prasinoderma coloniale HOM05D003957 ORTHO05D004833 1.1e-62 245.0 382 36.4
PRCOL_00000364 Prasinoderma coloniale HOM05D003957 ORTHO05D004833 8.9e-57 225.3 321 38.9
Aa31LG11G7410 Aethionema arabicum HOM05D003957 ORTHO05D004833 2.6e-56 223.8 155 63.9
MCO15G235 Micromonas commoda HOM05D003957 ORTHO05D004833 2.7e-53 213.8 278 40.6
FAN03G1487 Fragaria x ananassa HOM05D003957 ORTHO05D004833 1.7e-52 211.1 139 66.9
Ah.00g001360 Amaranthus hybridus HOM05D003957 ORTHO05D004833 2.9e-47 193.7 147 59.9
HPP92_013483 Vanilla planifolia HOM05D003957 ORTHO05D004833 4.7e-42 176.4 136 53.7
CSS0043854 Camellia sinensis var. sinensis HOM05D003957 ORTHO05D004833 2.0e-40 171.0 132 58.3
unitig_749.g13713 Utricularia gibba HOM05D003957 ORTHO05D004833 1.5e-32 144.8 241 36.1
unitig_749.g13714 Utricularia gibba HOM05D003957 ORTHO05D004833 3.4e-32 143.7 84 77.4
PRCOL_00003547 Prasinoderma coloniale HOM05D003957 ORTHO05D004833 9.9e-32 142.1 301 31.9
Cfa010780 Carpinus fangiana HOM05D003957 ORTHO05D004833 7.1e-30 136.0 110 63.6
CSS0024453 Camellia sinensis var. sinensis HOM05D003957 ORTHO05D004833 3.0e-28 130.6 76 80.3
Cfa010787 Carpinus fangiana HOM05D003957 ORTHO05D004833 8.6e-28 129.0 125 57.6
Haze_03193 Corylus avellana HOM05D000309 ORTHO05D000008 4.0e-25 120.2 60 90.0
Lalb_Chr01g0000371 Lupinus albus HOM05D003957 ORTHO05D004833 5.2e-25 119.8 110 58.2
arahy.Tifrunner.gnm1.ann1.2RNN62 Arachis hypogaea HOM05D000368 ORTHO05D000289 2.6e-24 117.5 73 74.0
RcHm_v2.0_Chr1g0316481 Rosa chinensis HOM05D003957 ORTHO05D037444 1.7e-23 114.8 81 60.5
CSS0008275 Camellia sinensis var. sinensis HOM05D003957 ORTHO05D004833 2.9e-23 114.0 113 54.9
CSS0028199 Camellia sinensis var. sinensis HOM05D003957 ORTHO05D004833 3.8e-23 113.6 75 68.0
Gohir.D13G107450 Gossypium hirsutum HOM05D003957 ORTHO05D004833 3.8e-23 113.6 111 56.8
Gorai.007G239900 Gossypium raimondii HOM05D003957 ORTHO05D004833 1.1e-22 112.1 111 56.8
Sopen01g034450 Solanum pennellii HOM05D003957 ORTHO05D030633 1.6e-21 108.2 153 41.8
Solyc01g087410.4 Solanum lycopersicum HOM05D003531 ORTHO05D004354 3.0e-20 104.0 153 40.5
Ah.00g001340 Amaranthus hybridus HOM05D003957 ORTHO05D004833 3.3e-19 100.5 109 51.4
Gohir.D04G098500 Gossypium hirsutum HOM05D003957 ORTHO05D004833 1.3e-18 98.6 74 67.6
Gorai.009G400700 Gossypium raimondii HOM05D003957 ORTHO05D004833 3.6e-18 97.1 73 67.1
Prupe.2G015100 Prunus persica HOM05D002736 ORTHO05D003882 1.1e-17 95.5 60 70.0
Solyc01g087390.2 Solanum lycopersicum HOM05D003531 ORTHO05D004354 2.6e-16 90.9 146 37.7
vmacro21188 Vaccinium macrocarpon HOM05D003957 ORTHO05D004833 4.4e-16 90.1 79 50.6
Solyc01g087370.2 Solanum lycopersicum HOM05D003531 ORTHO05D030633 7.6e-16 89.4 146 37.7
BolC6t39673H Brassica oleracea HOM05D003957 ORTHO05D004833 4.9e-15 86.7 69 62.3
QL04p008294 Quercus lobata HOM05D003957 ORTHO05D037444 1.7e-12 78.2 53 66.0
Thecc.09G345400 Theobroma cacao HOM05D003957 ORTHO05D037444 4.0e-09 67.0 51 58.8
Sopen01g034430 Solanum pennellii HOM05D003957 ORTHO05D030633 5.3e-09 66.6 87 40.2
Cre10.g423400 Chlamydomonas reinhardtii HOM05D004284 ORTHO05D044199 1.9e-06 58.2 186 25.3
Cre06.g284800 Chlamydomonas reinhardtii HOM05D004284 ORTHO05D044119 2.4e-06 57.8 188 27.7
Sopen01g034360 Solanum pennellii HOM05D003531 ORTHO05D004354 4.2e-06 57.0 66 51.5


User provided reference genes

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