Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0010499 Sechium edule HOM05D001486 ORTHO05D004921 0.0e+00 2895.1 1484 100.0
MELO3C026441.2 Cucumis melo HOM05D001486 ORTHO05D004921 0.0e+00 2672.1 1490 91.5
ClCG07G005610 Citrullus lanatus HOM05D001486 ORTHO05D004921 0.0e+00 2671.7 1481 92.2
CsaV3_5G015740 Cucumis sativus L. HOM05D001486 ORTHO05D004921 0.0e+00 2669.0 1491 91.4
QL03p035815 Quercus lobata HOM05D001486 ORTHO05D004921 0.0e+00 2335.1 1490 78.9
Prupe.1G333300 Prunus persica HOM05D001486 ORTHO05D004921 0.0e+00 2296.9 1492 77.4
Thecc.02G292500 Theobroma cacao HOM05D001486 ORTHO05D004921 0.0e+00 2283.8 1497 76.7
TWI74G0959 Tripterygium wilfordii HOM05D001486 ORTHO05D004921 0.0e+00 2265.0 1500 76.0
CANSAT01G0610 Cannabis sativa HOM05D001486 ORTHO05D004921 0.0e+00 2264.2 1484 76.6
Gohir.D02G139700 Gossypium hirsutum HOM05D001486 ORTHO05D004921 0.0e+00 2259.2 1497 76.2
Gorai.005G157100 Gossypium raimondii HOM05D001486 ORTHO05D004921 0.0e+00 2258.0 1496 76.1
Manes.17G083900 Manihot esculenta HOM05D001486 ORTHO05D004921 0.0e+00 2251.1 1498 75.6
Duzib268G0355 Durio zibethinus HOM05D001486 ORTHO05D004921 0.0e+00 2250.7 1497 76.2
Glyma.08G045900 Glycine max HOM05D001486 ORTHO05D004921 0.0e+00 2241.8 1493 75.6
Potri.008G134800 Populus trichocarpa HOM05D001486 ORTHO05D004921 0.0e+00 2241.1 1496 75.2
Glyma.05G238800 Glycine max HOM05D001486 ORTHO05D004921 0.0e+00 2238.0 1492 75.3
COL.COLO4_16588 Corchorus olitorius HOM05D001486 ORTHO05D004921 0.0e+00 2237.6 1497 75.8
MD13G1020400 Malus domestica HOM05D001486 ORTHO05D004921 0.0e+00 2237.2 1486 76.3
Atru.chr11.925 Acer truncatum HOM05D001486 ORTHO05D004921 0.0e+00 2236.5 1498 76.0
arahy.Tifrunner.gnm1.ann1.WZE3XK Arachis hypogaea HOM05D001486 ORTHO05D004921 0.0e+00 2232.2 1492 75.2
Ciclev10014036m.g Citrus clementina HOM05D001486 ORTHO05D004921 0.0e+00 2231.8 1497 75.4
VMungo0251G0466 Vigna mungo HOM05D001486 ORTHO05D004921 0.0e+00 2231.1 1492 74.9
TPR.G19252 Trifolium pratense HOM05D001486 ORTHO05D004921 0.0e+00 2230.7 1492 75.4
Lj4g0010019 Lotus japonicus HOM05D001486 ORTHO05D004921 0.0e+00 2228.4 1492 75.7
Phvul.002G321200 Phaseolus vulgaris HOM05D001486 ORTHO05D004921 0.0e+00 2228.0 1491 74.8
arahy.Tifrunner.gnm1.ann1.FK3VI9 Arachis hypogaea HOM05D001486 ORTHO05D004921 0.0e+00 2225.3 1483 75.3
Medtr8g105290 Medicago truncatula HOM05D001486 ORTHO05D004921 0.0e+00 2223.4 1492 75.3
RcHm_v2.0_Chr4g0443061 Rosa chinensis HOM05D001486 ORTHO05D004921 0.0e+00 2218.4 1489 74.7
Duzib251G0538 Durio zibethinus HOM05D001486 ORTHO05D004921 0.0e+00 2217.2 1497 74.9
Ca_17277_v3 Cicer arietinum L. HOM05D001486 ORTHO05D004921 0.0e+00 2215.7 1493 75.3
Lj3A864G85 Lonicera japonica HOM05D001486 ORTHO05D004921 0.0e+00 2205.3 1499 74.8
FvH4_4g33560 Fragaria vesca HOM05D001486 ORTHO05D004921 0.0e+00 2204.1 1489 74.1
FAN22G2372 Fragaria x ananassa HOM05D001486 ORTHO05D004921 0.0e+00 2202.6 1489 74.0
CSS0037038 Camellia sinensis var. sinensis HOM05D001486 ORTHO05D004921 0.0e+00 2201.4 1493 74.7
Psat7g007960 Pisum sativum HOM05D001486 ORTHO05D004921 0.0e+00 2196.8 1491 74.3
Actinidia36627 Actinidia chinensis HOM05D001486 ORTHO05D004921 0.0e+00 2196.0 1498 74.5
FAN12G0503 Fragaria x ananassa HOM05D001486 ORTHO05D004921 0.0e+00 2194.5 1489 73.8
FAN17G1739 Fragaria x ananassa HOM05D001486 ORTHO05D004921 0.0e+00 2190.6 1489 73.7
Eucgr.G02106 Eucalyptus grandis HOM05D001486 ORTHO05D004921 0.0e+00 2190.2 1491 74.6
FAN07G1595 Fragaria x ananassa HOM05D001486 ORTHO05D004921 0.0e+00 2189.8 1480 74.1
Sabra08G0102800 Salix brachista HOM05D001486 ORTHO05D004921 0.0e+00 2184.5 1532 72.7
Lalb_Chr09g0330891 Lupinus albus HOM05D001486 ORTHO05D004921 0.0e+00 2184.1 1492 73.9
PGR142G2431 Punica granatum HOM05D001486 ORTHO05D004921 0.0e+00 2176.7 1496 73.7
Lalb_Chr05g0222211 Lupinus albus HOM05D001486 ORTHO05D004921 0.0e+00 2166.0 1482 73.3
Actinidia12394 Actinidia chinensis HOM05D001486 ORTHO05D004921 0.0e+00 2157.9 1481 74.2
vmacro10693 Vaccinium macrocarpon HOM05D001486 ORTHO05D004921 0.0e+00 2147.5 1554 70.9
Aqoxy3G03310 Aquilegia oxysepala HOM05D001486 ORTHO05D004921 0.0e+00 2122.4 1480 72.4
MSTRG.2128 Avicennia marina HOM05D001486 ORTHO05D004921 0.0e+00 2121.3 1498 71.5
EL10Ac3g06288 Beta vulgaris HOM05D001486 ORTHO05D004921 0.0e+00 2119.0 1493 72.4
Nn4g24372 Nelumbo nucifera HOM05D001486 ORTHO05D004921 0.0e+00 2111.3 1453 74.2
Rhsim09G0089500 Rhododendron simsii HOM05D001486 ORTHO05D004921 0.0e+00 2110.1 1568 69.1
Migut.E00481 Erythranthe guttata HOM05D001486 ORTHO05D004921 0.0e+00 2108.2 1494 71.9
Aqoxy7G03241 Aquilegia oxysepala HOM05D001486 ORTHO05D004921 0.0e+00 2101.6 1480 71.9
Cc04_g10510 Coffea canephora HOM05D001486 ORTHO05D004921 0.0e+00 2101.2 1497 72.2
SGA_v2.0_scaffold23G10214 Striga asiatica HOM05D001486 ORTHO05D004921 0.0e+00 2100.5 1495 71.8
CAN.G149.16 Capsicum annuum HOM05D001486 ORTHO05D004921 0.0e+00 2092.4 1490 70.9
Sopen07g004030 Solanum pennellii HOM05D001486 ORTHO05D004921 0.0e+00 2088.9 1489 70.8
SalBow2G2685 Salvia bowleyana HOM05D001486 ORTHO05D004921 0.0e+00 2087.4 1532 70.3
Solyc07g008160.3 Solanum lycopersicum HOM05D001486 ORTHO05D004921 0.0e+00 2083.5 1489 70.7
THA.LOC104823681 Tarenaya hassleriana HOM05D001486 ORTHO05D004921 0.0e+00 2079.7 1491 71.6
Thhalv10006562m.g Eutrema salsugineum HOM05D001486 ORTHO05D004921 0.0e+00 2060.0 1487 71.3
Ah.13g072990 Amaranthus hybridus HOM05D001486 ORTHO05D004921 0.0e+00 2055.0 1492 70.7
Carub.0001s1464 Capsella rubella HOM05D001486 ORTHO05D004921 0.0e+00 2052.3 1489 70.7
AL1G26870 Arabidopsis lyrata HOM05D001486 ORTHO05D004921 0.0e+00 2050.4 1492 70.8
Hund13366 Selenicereus undatus HOM05D001486 ORTHO05D004921 0.0e+00 2050.0 1548 69.1
CARHR015390 Cardamine hirsuta HOM05D001486 ORTHO05D004921 0.0e+00 2049.2 1491 70.7
AT1G14850 Arabidopsis thaliana HOM05D001486 ORTHO05D004921 0.0e+00 2046.2 1491 70.6
BcaB02g06554 Brassica carinata HOM05D001486 ORTHO05D004921 0.0e+00 2045.8 1484 70.8
Cpa.g.sc2.194 Carica papaya HOM05D001486 ORTHO05D004921 0.0e+00 2041.2 1501 70.3
BcaC05g25406 Brassica carinata HOM05D001486 ORTHO05D004921 0.0e+00 2039.6 1484 70.7
Sp1g13290 Schrenkiella parvula HOM05D001486 ORTHO05D004921 0.0e+00 2036.9 1487 70.4
C05p12830 Brassica napus HOM05D001486 ORTHO05D004921 0.0e+00 2035.4 1494 70.5
DCAR_007329 Daucus carota HOM05D001486 ORTHO05D004921 0.0e+00 2035.4 1497 68.9
BcaC07g41534 Brassica carinata HOM05D001486 ORTHO05D004921 0.0e+00 2034.2 1486 70.4
AUR62002589 Chenopodium quinoa HOM05D001486 ORTHO05D004921 0.0e+00 2032.3 1478 70.4
BolC5t30028H Brassica oleracea HOM05D001486 ORTHO05D004921 0.0e+00 2031.5 1494 70.2
ECA233G0786 Erigeron canadensis HOM05D001486 ORTHO05D004921 0.0e+00 2030.8 1476 69.7
BolC8t52091H Brassica oleracea HOM05D001486 ORTHO05D004921 0.0e+00 2029.2 1494 70.1
C08p45360 Brassica napus HOM05D001486 ORTHO05D004921 0.0e+00 2028.1 1496 69.9
Sc11g0004180 Simmondsia chinensis HOM05D001486 ORTHO05D004921 0.0e+00 2028.1 1495 69.3
A09p61750 Brassica napus HOM05D001486 ORTHO05D004921 0.0e+00 2021.5 1495 70.0
BraA09t41545Z Brassica rapa HOM05D001486 ORTHO05D004921 0.0e+00 2018.4 1499 69.6
BcaB08g34420 Brassica carinata HOM05D001486 ORTHO05D004921 0.0e+00 2017.3 1485 70.0
BraA06t24267Z Brassica rapa HOM05D001486 ORTHO05D004921 0.0e+00 2016.1 1494 69.9
HanXRQChr08g0212501 Helianthus annuus HOM05D001486 ORTHO05D004921 0.0e+00 2008.4 1487 68.3
Oeu064208.1 Olea europaea HOM05D001486 ORTHO05D004921 0.0e+00 1986.5 1498 67.8
AUR62030013 Chenopodium quinoa HOM05D001486 ORTHO05D004921 0.0e+00 1983.0 1572 66.2
PSO782G0822 Papaver somniferum HOM05D001486 ORTHO05D004921 0.0e+00 1978.0 1493 68.3
CiPaw.06G051900 Carya illinoinensis HOM05D001486 ORTHO05D004921 0.0e+00 1976.4 1300 77.1
PSO063G3102 Papaver somniferum HOM05D001486 ORTHO05D004921 0.0e+00 1966.0 1493 67.9
Lsat_1_v5_gn_8_46521 Lactuca sativa HOM05D001486 ORTHO05D004921 0.0e+00 1953.3 1469 68.1
Aa31LG1G260 Aethionema arabicum HOM05D001486 ORTHO05D004921 0.0e+00 1944.1 1460 69.0
Dinv10475 Davidia involucrata HOM05D001486 ORTHO05D004921 0.0e+00 1932.1 1305 75.6
Haze_10881 Corylus avellana HOM05D001486 ORTHO05D004921 0.0e+00 1928.3 1583 64.9
Gohir.A03G115400 Gossypium hirsutum HOM05D001486 ORTHO05D004921 0.0e+00 1914.8 1308 74.7
ATR0753G157 Amborella trichopoda HOM05D001486 ORTHO05D004921 0.0e+00 1884.4 1503 66.0
Dinv07730 Davidia involucrata HOM05D001486 ORTHO05D004921 0.0e+00 1869.0 1277 74.1
HPP92_002282 Vanilla planifolia HOM05D001486 ORTHO05D004921 0.0e+00 1805.0 1482 62.9
Os06g0305200 Oryza sativa ssp. japonica HOM05D001486 ORTHO05D004921 0.0e+00 1798.1 1480 61.8
A06p10890 Brassica napus HOM05D001486 ORTHO05D004921 0.0e+00 1790.8 1364 68.8
Hma1.2p1_0277F.1_g111740 Hydrangea macrophylla HOM05D001486 ORTHO05D004921 0.0e+00 1790.8 1387 68.5
CAN.G601.2 Capsicum annuum HOM05D001486 ORTHO05D004921 0.0e+00 1790.0 1296 70.6
Hma1.2p1_0705F.1_g206910 Hydrangea macrophylla HOM05D001486 ORTHO05D004921 0.0e+00 1771.5 1225 74.1
Zm00001eb009110 Zea mays HOM05D001486 ORTHO05D004921 0.0e+00 1748.4 1433 62.3
HanXRQChr12g0363231 Helianthus annuus HOM05D001486 ORTHO05D004921 0.0e+00 1700.3 1420 63.5
Peaxi162Scf00376g00816 Petunia axillaris HOM05D001486 ORTHO05D004921 0.0e+00 1697.9 1436 62.4
Mapoly0035s0137 Marchantia polymorpha HOM05D001486 ORTHO05D004921 0.0e+00 1563.5 1519 54.6
TAR629G0611 Trochodendron aralioides HOM05D001486 ORTHO05D004921 0.0e+00 1543.1 988 77.6
Pp3c8_3720 Physcomitrium patens HOM05D001486 ORTHO05D004921 0.0e+00 1538.9 1530 54.2
Peaxi162Scf01391g00116 Petunia axillaris HOM05D001486 ORTHO05D004921 0.0e+00 1430.2 1410 56.5
Lj1g0014898 Lotus japonicus HOM05D001486 ORTHO05D004921 0.0e+00 1425.2 1086 69.0
Zm00001eb399840 Zea mays HOM05D001486 ORTHO05D004921 0.0e+00 1368.6 1213 58.8
Nitab4.5_0004576g0040 Nicotiana tabacum HOM05D001486 ORTHO05D004921 0.0e+00 1326.6 1365 54.1
AagrBONN_evm.TU.Sc2ySwM_362.1455 Anthoceros agrestis HOM05D001486 ORTHO05D004921 0.0e+00 1300.4 1296 54.3
Nitab4.5_0010421g0010 Nicotiana tabacum HOM05D001486 ORTHO05D004921 0.0e+00 1276.5 1365 52.5
GSVIVG01011662001 Vitis vinifera HOM05D001486 ORTHO05D004921 0.0e+00 1087.8 739 76.0
Peaxi162Scf01152g00010 Petunia axillaris HOM05D001486 ORTHO05D004921 7.2e-308 1061.2 1275 49.7
MD16G1018500 Malus domestica HOM05D001486 ORTHO05D004921 2.4e-303 1046.2 746 70.4
SEGI_07920 Sequoiadendron giganteum HOM05D001486 ORTHO05D004921 1.1e-292 1010.7 847 61.4
Peaxi162Scf00047g00710 Petunia axillaris HOM05D001486 ORTHO05D004921 3.5e-246 856.3 777 59.8
unitig_27.g25159 Utricularia gibba HOM05D001486 ORTHO05D004921 2.1e-238 830.5 711 62.3
Peaxi162Scf01152g00113 Petunia axillaris HOM05D001486 ORTHO05D004921 8.7e-237 825.1 923 51.6
CDE06G1861 Ceratophyllum demersum HOM05D001486 ORTHO05D004921 2.5e-220 770.4 579 66.1
unitig_27.g25160 Utricularia gibba HOM05D001486 ORTHO05D004921 2.2e-203 714.1 610 61.3
CDE06G1153 Ceratophyllum demersum HOM05D001486 ORTHO05D004921 2.4e-202 710.7 600 63.0
Carub.0127s0003 Capsella rubella HOM05D001486 ORTHO05D004921 5.5e-191 672.9 892 45.4
GSVIVG01011661001 Vitis vinifera HOM05D001486 ORTHO05D004921 1.2e-174 618.6 361 81.4
MD16G1018600 Malus domestica HOM05D001486 ORTHO05D004921 1.2e-169 602.1 475 68.6
ECA247G0951 Erigeron canadensis HOM05D001486 ORTHO05D004921 2.8e-166 590.9 741 46.2
TAR629G0795 Trochodendron aralioides HOM05D001486 ORTHO05D004921 1.6e-161 575.1 442 69.7
AL1G32070 Arabidopsis lyrata HOM05D001486 ORTHO05D004921 2.0e-153 548.1 469 61.4
RcHm_v2.0_Chr2g0167011 Rosa chinensis HOM05D001486 ORTHO05D004921 4.0e-141 507.3 581 50.6
CDE07G1854 Ceratophyllum demersum HOM05D001486 ORTHO05D004921 1.8e-117 428.7 774 38.5
MCO15G435 Micromonas commoda HOM05D001486 ORTHO05D004921 6.2e-102 377.1 1738 25.5
MD16G1018800 Malus domestica HOM05D001486 ORTHO05D004921 1.4e-90 339.3 218 77.1
PRCOL_00002396 Prasinoderma coloniale HOM05D001486 ORTHO05D004921 7.2e-90 337.0 1504 26.1
SEGI_12334 Sequoiadendron giganteum HOM05D001486 ORTHO05D004921 1.0e-88 333.2 349 54.2
CDE07G0203 Ceratophyllum demersum HOM05D001486 ORTHO05D004921 6.3e-86 323.9 445 44.5
Cre09.g394350 Chlamydomonas reinhardtii HOM05D001486 ORTHO05D004921 1.1e-85 323.2 1606 25.0
SEGI_06977 Sequoiadendron giganteum HOM05D001486 ORTHO05D004921 6.7e-72 277.3 224 61.6
vmacro04889 Vaccinium macrocarpon HOM05D001486 ORTHO05D004921 3.3e-71 275.0 232 63.8
AL1G32080 Arabidopsis lyrata HOM05D001486 ORTHO05D004921 1.7e-70 272.7 230 62.2
FvH4_1g18130 Fragaria vesca HOM05D001486 ORTHO05D004921 1.6e-68 266.2 155 77.4
CAN.G601.1 Capsicum annuum HOM05D001486 ORTHO05D004921 1.6e-65 256.1 152 75.7
vmacro09906 Vaccinium macrocarpon HOM05D001486 ORTHO05D004921 8.3e-62 243.8 267 53.2
Zm00001eb255180 Zea mays HOM05D001486 ORTHO05D004921 9.1e-61 240.4 195 60.5
SGA_v2.0_scaffold23G10209 Striga asiatica HOM05D001486 ORTHO05D004921 3.7e-46 191.8 102 87.3
Pp3c3_36410 Physcomitrium patens HOM05D001486 ORTHO05D004921 1.2e-44 186.8 198 52.0
CSS0012816 Camellia sinensis var. sinensis HOM05D001486 ORTHO05D004921 2.3e-40 172.6 183 51.4
CARHR227050 Cardamine hirsuta HOM05D001486 ORTHO05D004921 6.4e-38 164.5 159 54.7
RcHm_v2.0_Chr2g0167021 Rosa chinensis HOM05D001486 ORTHO05D004921 1.4e-37 163.3 218 48.6
Zm00001eb235300 Zea mays HOM05D001486 ORTHO05D004921 1.5e-34 153.3 130 61.5
AL2G18360 Arabidopsis lyrata HOM05D001486 ORTHO05D004921 3.1e-32 145.6 343 34.1
BcaC09g49263 Brassica carinata HOM05D001486 ORTHO05D012131 2.1e-28 132.9 109 63.3
Zm00001eb201400 Zea mays HOM05D001486 ORTHO05D004921 4.6e-28 131.7 118 55.1
BcaC01g04114 Brassica carinata HOM05D001486 ORTHO05D012131 6.6e-27 127.9 106 65.1
ClCG01G015310 Citrullus lanatus HOM05D001486 ORTHO05D004921 4.3e-26 125.2 56 98.2
Rhsim12G0118300 Rhododendron simsii HOM05D001486 ORTHO05D004921 5.6e-26 124.8 101 66.3
ClCG09G011850 Citrullus lanatus HOM05D004959 ORTHO05D005961 4.7e-25 121.7 67 86.6
SEGI_12550 Sequoiadendron giganteum HOM05D001486 ORTHO05D004921 2.0e-23 116.3 58 87.9
Cfa024881 Carpinus fangiana HOM05D005623 ORTHO05D007130 3.4e-23 115.5 349 27.5
GSVIVG01026805001 Vitis vinifera HOM05D001486 ORTHO05D004921 6.8e-16 91.3 70 62.9
AL3G34910 Arabidopsis lyrata HOM05D001486 ORTHO05D004921 1.7e-14 86.7 134 40.3
GSVIVG01001572001 Vitis vinifera HOM05D001486 ORTHO05D004921 1.7e-14 86.7 112 49.1
Hma1.2p1_0277F.1_g111730 Hydrangea macrophylla HOM05D001486 ORTHO05D004921 7.8e-12 77.8 53 64.2
Hma1.2p1_0705F.1_g206905 Hydrangea macrophylla HOM05D001486 ORTHO05D004921 7.8e-12 77.8 53 64.2
CSS0014875 Camellia sinensis var. sinensis HOM05D014252 ORTHO05D004921 2.0e-07 63.2 40 77.5
FvH4_4g10520 Fragaria vesca HOM05D002057 ORTHO05D004921 3.4e-07 62.4 34 76.5
SMO306G0002 Selaginella moellendorffii HOM05D065592 ORTHO05D004921 3.8e-06 58.9 146 29.5
SMO270G0006 Selaginella moellendorffii HOM05D065592 ORTHO05D004921 8.4e-06 57.8 146 29.5


User provided reference genes

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