Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0010204 Sechium edule HOM05D005564 ORTHO05D006872 2.2e-158 562.4 306 100.0
CsaV3_5G005020 Cucumis sativus L. HOM05D005564 ORTHO05D006872 2.2e-110 402.9 269 75.5
ClCG01G004820 Citrullus lanatus HOM05D005564 ORTHO05D006872 7.0e-109 397.9 269 74.3
ClCG09G010750 Citrullus lanatus HOM05D005564 ORTHO05D006872 2.2e-102 376.3 225 80.4
Atru.chr6.1979 Acer truncatum HOM05D005564 ORTHO05D006872 3.8e-94 349.0 270 64.8
Atru.chr6.2007 Acer truncatum HOM05D005564 ORTHO05D006872 3.8e-94 349.0 270 64.8
Cfa013601 Carpinus fangiana HOM05D005564 ORTHO05D006872 4.9e-94 348.6 305 59.3
QL09p027441 Quercus lobata HOM05D005564 ORTHO05D006872 1.1e-93 347.4 234 70.9
FvH4_7g26720 Fragaria vesca HOM05D005564 ORTHO05D006872 3.2e-93 345.9 231 69.7
Prupe.2G270700 Prunus persica HOM05D005564 ORTHO05D006872 7.1e-93 344.7 232 72.8
CiPaw.07G183300 Carya illinoinensis HOM05D005564 ORTHO05D006872 1.6e-92 343.6 224 73.2
MD07G1243700 Malus domestica HOM05D005564 ORTHO05D006872 1.6e-92 343.6 232 72.0
MD07G1241800 Malus domestica HOM05D005564 ORTHO05D006872 2.1e-92 343.2 232 71.6
Manes.06G130000 Manihot esculenta HOM05D005564 ORTHO05D006872 7.8e-92 341.3 224 71.0
Thecc.03G145600 Theobroma cacao HOM05D005564 ORTHO05D006872 1.1e-90 337.4 236 68.6
GSVIVG01024470001 Vitis vinifera HOM05D005564 ORTHO05D006872 9.6e-90 334.3 234 68.4
Duzib084G1177 Durio zibethinus HOM05D005564 ORTHO05D006872 2.8e-89 332.8 271 62.7
TWI39G1038 Tripterygium wilfordii HOM05D005564 ORTHO05D006872 4.7e-89 332.0 235 68.9
CANSAT56G0249 Cannabis sativa HOM05D005564 ORTHO05D006872 1.1e-88 330.9 227 70.9
Gohir.D07G048900 Gossypium hirsutum HOM05D005564 ORTHO05D006872 3.1e-88 329.3 270 61.9
Gohir.A13G032000 Gossypium hirsutum HOM05D005564 ORTHO05D006872 4.0e-88 328.9 270 61.5
Gorai.001G052100 Gossypium raimondii HOM05D005564 ORTHO05D006872 4.0e-88 328.9 270 61.5
TPR.G39148 Trifolium pratense HOM05D005564 ORTHO05D006872 5.8e-87 325.1 230 67.0
Gorai.007G289400 Gossypium raimondii HOM05D005564 ORTHO05D006872 9.9e-87 324.3 270 60.7
Ciclev10032148m.g Citrus clementina HOM05D005564 ORTHO05D006872 2.2e-86 323.2 275 60.0
Nitab4.5_0003973g0040 Nicotiana tabacum HOM05D005564 ORTHO05D006872 1.1e-85 320.9 271 60.1
Medtr0053s0020 Medicago truncatula HOM05D005564 ORTHO05D006872 1.4e-85 320.5 229 66.4
Sabra15G0133100 Salix brachista HOM05D005564 ORTHO05D006872 1.9e-85 320.1 234 67.5
THA.LOC104825050 Tarenaya hassleriana HOM05D005564 ORTHO05D006872 1.9e-85 320.1 226 66.8
Glyma.01G079300 Glycine max HOM05D005564 ORTHO05D006872 3.2e-85 319.3 229 67.7
Gorai.005G129900 Gossypium raimondii HOM05D005564 ORTHO05D006872 4.2e-85 318.9 270 60.4
Cpa.g.sc13.231 Carica papaya HOM05D005564 ORTHO05D006872 5.4e-85 318.5 239 65.3
Potri.015G111628 Populus trichocarpa HOM05D005564 ORTHO05D006872 5.4e-85 318.5 234 66.2
CSS0008072 Camellia sinensis var. sinensis HOM05D005564 ORTHO05D006872 1.2e-84 317.4 235 66.4
Haze_22223 Corylus avellana HOM05D005564 ORTHO05D006872 1.6e-84 317.0 232 68.1
CAN.G309.23 Capsicum annuum HOM05D005564 ORTHO05D006872 2.1e-84 316.6 272 59.9
TAR629G2772 Trochodendron aralioides HOM05D005564 ORTHO05D006872 2.7e-84 316.2 225 68.0
Lj1g0017373 Lotus japonicus HOM05D005564 ORTHO05D006872 3.5e-84 315.8 231 65.4
Cc00_g13030 Coffea canephora HOM05D005564 ORTHO05D006872 1.3e-83 313.9 242 61.6
MD01G1175500 Malus domestica HOM05D005564 ORTHO05D006872 1.3e-83 313.9 314 55.4
Gohir.A07G044400 Gossypium hirsutum HOM05D005564 ORTHO05D006872 1.1e-82 310.8 273 57.9
Nn6g33765 Nelumbo nucifera HOM05D005564 ORTHO05D006872 1.5e-82 310.5 219 68.9
PGSC0003DMG400008328 Solanum tuberosum HOM05D005564 ORTHO05D006872 1.5e-82 310.5 228 64.5
BraSC35t46004Z Brassica rapa HOM05D005564 ORTHO05D006872 3.3e-82 309.3 221 66.5
Lalb_Chr19g0127411 Lupinus albus HOM05D005564 ORTHO05D006872 3.3e-82 309.3 229 62.9
CSS0031726 Camellia sinensis var. sinensis HOM05D005564 ORTHO05D006872 4.3e-82 308.9 226 68.1
Hma1.2p1_1014F.1_g247960 Hydrangea macrophylla HOM05D005564 ORTHO05D006872 4.3e-82 308.9 233 66.1
Hma1.2p1_1305F.1_g274526 Hydrangea macrophylla HOM05D005564 ORTHO05D006872 4.3e-82 308.9 233 66.1
VMungo1383G3643 Vigna mungo HOM05D005564 ORTHO05D006872 4.3e-82 308.9 232 65.5
Sp6g13380 Schrenkiella parvula HOM05D005564 ORTHO05D006872 5.6e-82 308.5 229 65.9
A10p07960 Brassica napus HOM05D005564 ORTHO05D006872 7.3e-82 308.1 221 66.1
Eucgr.A02932 Eucalyptus grandis HOM05D005564 ORTHO05D006872 7.3e-82 308.1 227 63.9
Lj8A49G34 Lonicera japonica HOM05D005564 ORTHO05D006872 7.3e-82 308.1 268 63.8
TAR636G1392 Trochodendron aralioides HOM05D005564 ORTHO05D008130 7.3e-82 308.1 219 66.7
Aa31LG3G7670 Aethionema arabicum HOM05D005564 ORTHO05D006872 9.6e-82 307.8 227 63.9
Carub.0008s1121 Capsella rubella HOM05D005564 ORTHO05D006872 2.1e-81 306.6 232 64.2
Thhalv10014247m.g Eutrema salsugineum HOM05D005564 ORTHO05D006872 2.1e-81 306.6 229 65.9
BcaC04g20726 Brassica carinata HOM05D005564 ORTHO05D006872 2.8e-81 306.2 221 65.6
C09p39850 Brassica napus HOM05D005564 ORTHO05D006872 2.8e-81 306.2 221 65.6
BolC9t56884H Brassica oleracea HOM05D005564 ORTHO05D006872 2.8e-81 306.2 221 65.6
Migut.F00541 Erythranthe guttata HOM05D005564 ORTHO05D006872 6.2e-81 305.1 241 63.1
FAN03G1301 Fragaria x ananassa HOM05D005564 ORTHO05D006872 6.2e-81 305.1 208 69.2
arahy.Tifrunner.gnm1.ann1.2T0BFY Arachis hypogaea HOM05D005564 ORTHO05D006872 8.1e-81 304.7 236 62.3
Phvul.008G143300 Phaseolus vulgaris HOM05D005564 ORTHO05D006872 1.4e-80 303.9 229 63.3
FAN06G0976 Fragaria x ananassa HOM05D005564 ORTHO05D006872 1.8e-80 303.5 208 68.8
Sopen03g024760 Solanum pennellii HOM05D005564 ORTHO05D006872 1.8e-80 303.5 228 63.2
AL8G25430 Arabidopsis lyrata HOM05D005564 ORTHO05D006872 2.4e-80 303.1 220 66.8
AT5G51170 Arabidopsis thaliana HOM05D005564 ORTHO05D006872 3.1e-80 302.8 229 65.1
MELO3C005454.2 Cucumis melo HOM05D005564 ORTHO05D006872 4.0e-80 302.4 205 75.1
Hund18321 Selenicereus undatus HOM05D005564 ORTHO05D006872 4.0e-80 302.4 222 67.1
Dinv34536 Davidia involucrata HOM05D005564 ORTHO05D006872 5.3e-80 302.0 220 67.7
MD07G1244900 Malus domestica HOM05D005564 ORTHO05D006872 5.3e-80 302.0 204 71.1
Solyc03g093880.3 Solanum lycopersicum HOM05D005564 ORTHO05D006872 1.5e-79 300.4 228 62.7
Ah.08g213710 Amaranthus hybridus HOM05D005564 ORTHO05D006872 2.0e-79 300.1 233 61.8
BcaB08g35471 Brassica carinata HOM05D005564 ORTHO05D006872 2.6e-79 299.7 242 61.2
CARHR256880 Cardamine hirsuta HOM05D005564 ORTHO05D006872 3.4e-79 299.3 229 63.8
vmacro19959 Vaccinium macrocarpon HOM05D005564 ORTHO05D006872 4.5e-79 298.9 225 64.9
PSO017G2767 Papaver somniferum HOM05D005564 ORTHO05D006872 9.9e-79 297.7 222 63.1
Phvul.005G030000 Phaseolus vulgaris HOM05D005564 ORTHO05D006872 1.7e-78 297.0 231 63.6
COL.COLO4_37310 Corchorus olitorius HOM05D005564 ORTHO05D006872 2.2e-78 296.6 234 63.2
SGA_v2.0_scaffold60G20845 Striga asiatica HOM05D005564 ORTHO05D006872 2.2e-78 296.6 227 61.2
PSO063G5398 Papaver somniferum HOM05D005564 ORTHO05D006872 4.9e-78 295.4 222 62.2
HanXRQChr08g0221891 Helianthus annuus HOM05D005564 ORTHO05D006872 1.9e-77 293.5 304 53.0
PGR042G2925 Punica granatum HOM05D005564 ORTHO05D006872 1.9e-77 293.5 226 63.7
HanXRQChr08g0223121 Helianthus annuus HOM05D005564 ORTHO05D006872 4.2e-77 292.4 304 53.3
Peaxi162Scf00073g01727 Petunia axillaris HOM05D005564 ORTHO05D006872 2.7e-76 289.7 271 55.0
Ca_27086_v3 Cicer arietinum L. HOM05D005564 ORTHO05D006872 4.6e-76 288.9 218 65.6
Oeu030874.1 Olea europaea HOM05D005564 ORTHO05D006872 4.6e-76 288.9 223 61.4
CDE02G1506 Ceratophyllum demersum HOM05D005564 ORTHO05D006872 6.0e-76 288.5 221 61.5
EL10Ac7g17720 Beta vulgaris HOM05D005564 ORTHO05D006872 1.0e-75 287.7 359 45.7
SalBow3G4594 Salvia bowleyana HOM05D005564 ORTHO05D006872 6.7e-75 285.0 230 60.4
MSTRG.27230 Avicennia marina HOM05D005564 ORTHO05D006872 3.3e-74 282.7 221 61.5
DCAR_020165 Daucus carota HOM05D005564 ORTHO05D006872 8.1e-73 278.1 232 61.2
VMungo1080G0069 Vigna mungo HOM05D005564 ORTHO05D006872 2.4e-72 276.6 269 54.3
Gorai.013G121700 Gossypium raimondii HOM05D005564 ORTHO05D006872 3.1e-72 276.2 242 59.5
ECA233G5472 Erigeron canadensis HOM05D005564 ORTHO05D006872 6.9e-72 275.0 200 68.0
SHI14145 Sapria himalayana HOM05D005564 ORTHO05D000001 1.5e-71 273.9 215 61.9
FAN01G2799 Fragaria x ananassa HOM05D005564 ORTHO05D006872 5.8e-71 271.9 236 57.6
ATR0188G007 Amborella trichopoda HOM05D005564 ORTHO05D006872 1.9e-69 266.9 226 59.7
PSO782G4004 Papaver somniferum HOM05D005564 ORTHO05D006872 2.5e-69 266.5 222 58.1
RcHm_v2.0_Chr1g0373311 Rosa chinensis HOM05D005564 ORTHO05D006872 4.2e-69 265.8 170 74.1
AUR62008825 Chenopodium quinoa HOM05D005564 ORTHO05D006872 7.1e-69 265.0 205 61.5
Zm00001eb249040 Zea mays HOM05D005564 ORTHO05D006872 9.3e-69 264.6 226 55.3
Rhsim03G0157100 Rhododendron simsii HOM05D005564 ORTHO05D006872 2.1e-68 263.5 233 59.2
AUR62025416 Chenopodium quinoa HOM05D005564 ORTHO05D006872 1.3e-67 260.8 210 59.5
FAN10G0633 Fragaria x ananassa HOM05D005564 ORTHO05D006872 1.5e-66 257.3 167 72.5
unitig_21.g20780 Utricularia gibba HOM05D005564 ORTHO05D006872 1.1e-61 241.1 195 61.5
SEGI_35477 Sequoiadendron giganteum HOM05D005564 ORTHO05D006872 1.8e-56 223.8 211 53.6
Os02g0651000 Oryza sativa ssp. japonica HOM05D005564 ORTHO05D006872 9.4e-53 211.5 188 54.3
MD07G1243300 Malus domestica HOM05D005564 ORTHO05D006872 1.6e-52 210.7 170 66.5
Sc19g0002740 Simmondsia chinensis HOM05D005564 ORTHO05D006872 1.8e-51 207.2 143 67.8
Nn6g32633 Nelumbo nucifera HOM05D005564 ORTHO05D006872 5.1e-51 205.7 137 72.3
Medtr0092s0090 Medicago truncatula HOM05D005564 ORTHO05D006872 8.8e-51 204.9 143 69.9
MD07G1245400 Malus domestica HOM05D005564 ORTHO05D006872 1.1e-50 204.5 149 70.5
SMO145G0164 Selaginella moellendorffii HOM05D005564 ORTHO05D006872 4.3e-50 202.6 231 44.6
Gorai.006G046400 Gossypium raimondii HOM05D005564 ORTHO05D006872 5.7e-50 202.2 138 71.0
Hma1.2p1_1014F.1_g247920 Hydrangea macrophylla HOM05D005564 ORTHO05D006872 1.8e-48 197.2 181 57.5
Nitab4.5_0000103g0380 Nicotiana tabacum HOM05D005564 ORTHO05D006872 3.1e-48 196.4 186 57.0
CANSAT78G0945 Cannabis sativa HOM05D005564 ORTHO05D006872 7.7e-47 191.8 238 45.0
AagrBONN_evm.TU.Sc2ySwM_228.2399 Anthoceros agrestis HOM05D005564 ORTHO05D006872 3.8e-46 189.5 226 44.7
arahy.Tifrunner.gnm1.ann1.R6MN5Z Arachis hypogaea HOM05D005564 ORTHO05D006872 3.7e-41 172.9 224 42.9
Aqoxy3G02663 Aquilegia oxysepala HOM05D005564 ORTHO05D006872 4.8e-41 172.6 132 62.9
CAN.G1016.1 Capsicum annuum HOM05D005564 ORTHO05D006872 2.6e-39 166.8 120 62.5
Pp3c13_1340 Physcomitrium patens HOM05D005564 ORTHO05D006872 3.5e-39 166.4 168 51.2
Gohir.D02G135666 Gossypium hirsutum HOM05D005564 ORTHO05D006872 5.0e-38 162.5 109 72.5
Rhsim03G0158000 Rhododendron simsii HOM05D005564 ORTHO05D006872 1.1e-37 161.4 207 44.9
CDE11G0070 Ceratophyllum demersum HOM05D005564 ORTHO05D006872 5.2e-35 152.5 118 61.9
Prupe.4G133000 Prunus persica HOM05D005564 ORTHO05D006872 2.0e-34 150.6 170 50.6
Dinv34539 Davidia involucrata HOM05D005564 ORTHO05D006872 2.6e-34 150.2 234 40.2
Lsat_1_v5_gn_8_13861 Lactuca sativa HOM05D000071 ORTHO05D006872 1.8e-32 144.1 114 59.6
CBR_g31024 Chara braunii HOM05D005564 ORTHO05D006872 1.5e-29 134.4 278 33.8
Gohir.D02G130966 Gossypium hirsutum HOM05D005564 ORTHO05D006872 2.8e-25 120.2 125 52.0
Psat3g166160 Pisum sativum HOM05D005564 ORTHO05D006872 3.5e-23 113.2 143 43.4
Nn6g32636 Nelumbo nucifera HOM05D005564 ORTHO05D006872 4.5e-23 112.8 84 63.1
Psat3g164240 Pisum sativum HOM05D005564 ORTHO05D006872 5.5e-21 105.9 125 46.4
Cre01.g041900 Chlamydomonas reinhardtii HOM05D005564 ORTHO05D006872 9.1e-16 88.6 195 32.8
Mapoly0036s0004 Marchantia polymorpha HOM05D005564 ORTHO05D006872 1.2e-15 88.2 129 38.8
MCO11G677 Micromonas commoda HOM05D005564 ORTHO05D006872 2.1e-12 77.4 236 27.5


User provided reference genes

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