Gene: COL.COLO4_37310
General Information
Structural Information
- Species Corchorus olitorius
- Gene Identifier COL.COLO4_37310
- Transcript Identifier COL.rna35990
- Gene Type Coding gene
- Location AWUE01023877.1 : 36724-39267 : negative
Gene Family Information
- ID HOM05D005564
- #Genes/#Species 138/95
- Phylogenetic origin
- ID ORTHO05D006872
- #Genes/#Species 137/95
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid rna35990
- GenBank OMO52268.1
- id gene37282
- gene_name COLO4_37310
- uniprot A0A1R3G2F5
Descriptions
- Description hypothetical protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0090305 | IEA | GOA Database | nucleic acid phosphodiester bond hydrolysis | |
| GO:0090503 | IEA | GOA Database | RNA phosphodiester bond hydrolysis, exonucleolytic | |
| GO:0034477 | IEA | GOA Database | U6 snRNA 3'-end processing | |
| GO:0034477 | IEA | InterPro | U6 snRNA 3'-end processing |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:1990838 | IEA | GOA Database | poly(U)-specific exoribonuclease activity, producing 3' uridine cyclic phosphate ends | |
| GO:0000175 | IEA | GOA Database | 3'-5'-exoribonuclease activity | |
| GO:0016787 | IEA | GOA Database | hydrolase activity | |
| GO:0004518 | IEA | GOA Database | nuclease activity | |
| GO:0004518 | IEA | InterPro | nuclease activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR027521 | U6 snRNA phosphodiesterase Usb1 |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |