Gene: Solyc03g093880.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc03g093880.3
  • Transcript Identifier Solyc03g093880.3.1
  • Gene Type Coding gene
  • Location SL4.0ch03 : 50091488-50095651 : positive

Gene Family Information

  • ID HOM05D005564
  • #Genes/#Species 138/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc03g093880.3.1
  • uniprot A0A3Q7FNW2
  • gene_id Solyc03g093880

Descriptions

  • Description U6 snRNA phosphodiesterase (AHRD V3.3 *** A0A2G2YI60_CAPAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0034477
IBA
IEA
GOA DatabaseU6 snRNA 3'-end processing
GO:0034477
IEA
InterProU6 snRNA 3'-end processing
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis
GO:0090503
IEA
GOA DatabaseRNA phosphodiester bond hydrolysis, exonucleolytic

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004518
IEA
GOA Databasenuclease activity
GO:0004518
IEA
InterPronuclease activity
GO:1990838
IEA
GOA Databasepoly(U)-specific exoribonuclease activity, producing 3' uridine cyclic phosphate ends
GO:0000175
IBA
IEA
GOA Database3'-5'-exoribonuclease activity
GO:0016787
IEA
GOA Databasehydrolase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027521 U6 snRNA phosphodiesterase Usb1
Mapman id Description
35.1 not assigned.annotated