Gene: PGR042G2925
General Information
Structural Information
- Species Punica granatum
- Gene Identifier PGR042G2925
- Transcript Identifier PGR042G2925.01
- Gene Type Coding gene
- Location NC_045130.1 : 39892330-39893900 : positive
Gene Family Information
- ID HOM05D005564
- #Genes/#Species 138/95
- Phylogenetic origin
- ID ORTHO05D006872
- #Genes/#Species 137/95
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- pid XP_031393154.1
- name LOC116204922
- name XM_031537294.1
- id gene-LOC116204922
- uniprot A0A218X413
Descriptions
- product U6 snRNA phosphodiesterase
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0034477 | IEA | GOA Database | U6 snRNA 3'-end processing | |
| GO:0034477 | IEA | InterPro | U6 snRNA 3'-end processing | |
| GO:0090305 | IEA | GOA Database | nucleic acid phosphodiester bond hydrolysis | |
| GO:0090503 | IEA | GOA Database | RNA phosphodiester bond hydrolysis, exonucleolytic |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004518 | IEA | GOA Database | nuclease activity | |
| GO:0004518 | IEA | InterPro | nuclease activity | |
| GO:1990838 | IEA | GOA Database | poly(U)-specific exoribonuclease activity, producing 3' uridine cyclic phosphate ends | |
| GO:0000175 | IEA | GOA Database | 3'-5'-exoribonuclease activity | |
| GO:0016787 | IEA | GOA Database | hydrolase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR027521 | U6 snRNA phosphodiesterase Usb1 |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |